Literature DB >> 25046442

Impact of long-term N, P, K, and NPK fertilization on the composition and potential functions of the bacterial community in grassland soil.

Yao Pan1, Noriko Cassman, Mattias de Hollander, Lucas W Mendes, Hein Korevaar, Rob H E M Geerts, Johannes A van Veen, Eiko E Kuramae.   

Abstract

Soil abiotic and biotic interactions govern important ecosystem processes. However, the mechanisms behind these interactions are complex, and the links between specific environmental factors, microbial community structures, and functions are not well understood. Here, we applied DNA shotgun metagenomic techniques to investigate the effect of inorganic fertilizers N, P, K, and NPK on the bacterial community composition and potential functions in grassland soils in a 54-year experiment. Differences in total and available nutrients were found in the treatment soils; interestingly, Al, As, Mg, and Mn contents were variable in N, P, K, and NPK treatments. Bacterial community compositions shifted and Actinobacteria were overrepresented under the four fertilization treatments compared to the control. Redundancy analysis of the soil parameters and the bacterial community profiles showed that Mg, total N, Cd, and Al were linked to community variation. Using correlation analysis, Acidobacteria, Bacteroidetes, and Verrucomicrobia were linked similarly to soil parameters, and Actinobacteria and Proteobacteria were linked separately to different suites of parameters. Surprisingly, we found no fertilizers effect on microbial functional profiles which supports functional redundancy as a mechanism for stabilization of functions during changes in microbial composition. We suggest that functional profiles are more resistant to environmental changes than community compositions in the grassland ecosystem.
© 2014 Federation of European Microbiological Societies. Published by John Wiley & Sons Ltd. All rights reserved.

Entities:  

Keywords:  environmental factors; metagenomics; microbial ecology; microbial function redundancy

Mesh:

Substances:

Year:  2014        PMID: 25046442     DOI: 10.1111/1574-6941.12384

Source DB:  PubMed          Journal:  FEMS Microbiol Ecol        ISSN: 0168-6496            Impact factor:   4.194


  43 in total

1.  Spatial scale drives patterns in soil bacterial diversity.

Authors:  Sarah L O'Brien; Sean M Gibbons; Sarah M Owens; Jarrad Hampton-Marcell; Eric R Johnston; Julie D Jastrow; Jack A Gilbert; Folker Meyer; Dionysios A Antonopoulos
Journal:  Environ Microbiol       Date:  2016-03-21       Impact factor: 5.491

2.  Soil-borne microbiome: linking diversity to function.

Authors:  Lucas W Mendes; Siu M Tsai; Acácio A Navarrete; Mattias de Hollander; Johannes A van Veen; Eiko E Kuramae
Journal:  Microb Ecol       Date:  2015-01-14       Impact factor: 4.552

3.  Impact of soil salinity on the microbial structure of halophyte rhizosphere microbiome.

Authors:  Salma Mukhtar; Babur Saeed Mirza; Samina Mehnaz; Muhammad Sajjad Mirza; Joan Mclean; Kauser Abdulla Malik
Journal:  World J Microbiol Biotechnol       Date:  2018-08-20       Impact factor: 3.312

4.  Organic Amendments in a Long-term Field Trial-Consequences for the Bulk Soil Bacterial Community as Revealed by Network Analysis.

Authors:  Christoph A O Schmid; Peter Schröder; Martin Armbruster; Michael Schloter
Journal:  Microb Ecol       Date:  2017-11-29       Impact factor: 4.552

5.  Manure and mineral fertilization change enzyme activity and bacterial community in millet rhizosphere soils.

Authors:  Lixia Xu; Min Yi; Huilan Yi; Erhu Guo; Aiying Zhang
Journal:  World J Microbiol Biotechnol       Date:  2017-12-13       Impact factor: 3.312

6.  Soil Microbial Network Complexity Varies With pH as a Continuum, Not a Threshold, Across the North China Plain.

Authors:  Ying Yang; Yu Shi; Jie Fang; Haiyan Chu; Jonathan M Adams
Journal:  Front Microbiol       Date:  2022-06-06       Impact factor: 6.064

7.  Consistent responses of soil microbial communities to elevated nutrient inputs in grasslands across the globe.

Authors:  Jonathan W Leff; Stuart E Jones; Suzanne M Prober; Albert Barberán; Elizabeth T Borer; Jennifer L Firn; W Stanley Harpole; Sarah E Hobbie; Kirsten S Hofmockel; Johannes M H Knops; Rebecca L McCulley; Kimberly La Pierre; Anita C Risch; Eric W Seabloom; Martin Schütz; Christopher Steenbock; Carly J Stevens; Noah Fierer
Journal:  Proc Natl Acad Sci U S A       Date:  2015-08-17       Impact factor: 11.205

8.  Bacterial and protozoan dynamics upon thawing and freezing of an active layer permafrost soil.

Authors:  Morten Schostag; Anders Priemé; Samuel Jacquiod; Jakob Russel; Flemming Ekelund; Carsten Suhr Jacobsen
Journal:  ISME J       Date:  2019-01-28       Impact factor: 10.302

9.  Differences in Precipitation Regime Shape Microbial Community Composition and Functional Potential in Namib Desert Soils.

Authors:  Yashini Naidoo; Angel Valverde; Rian E Pierneef; Don A Cowan
Journal:  Microb Ecol       Date:  2021-06-08       Impact factor: 4.552

10.  Multi-Analytical Approach Reveals Potential Microbial Indicators in Soil for Sugarcane Model Systems.

Authors:  Acacio Aparecido Navarrete; Tatiana Rosa Diniz; Lucas Palma Perez Braga; Genivaldo Gueiros Zacarias Silva; Julio Cezar Franchini; Raffaella Rossetto; Robert Alan Edwards; Siu Mui Tsai
Journal:  PLoS One       Date:  2015-06-09       Impact factor: 3.240

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