Literature DB >> 25038752

Exome sequencing identifies highly recurrent MED12 somatic mutations in breast fibroadenoma.

Weng Khong Lim1, Choon Kiat Ong1, Jing Tan1, Aye Aye Thike2, Cedric Chuan Young Ng3, Vikneswari Rajasegaran3, Swe Swe Myint3, Sanjanaa Nagarajan3, Nur Diyana Md Nasir2, John R McPherson4, Ioana Cutcutache4, Gregory Poore5, Su Ting Tay6, Wei Siong Ooi7, Veronique Kiak Mien Tan8, Mikael Hartman9, Kong Wee Ong8, Benita K T Tan10, Steven G Rozen4, Puay Hoon Tan2, Patrick Tan11, Bin Tean Teh12.   

Abstract

Fibroadenomas are the most common breast tumors in women under 30 (refs. 1,2). Exome sequencing of eight fibroadenomas with matching whole-blood samples revealed recurrent somatic mutations solely in MED12, which encodes a Mediator complex subunit. Targeted sequencing of an additional 90 fibroadenomas confirmed highly frequent MED12 exon 2 mutations (58/98, 59%) that are probably somatic, with 71% of mutations occurring in codon 44. Using laser capture microdissection, we show that MED12 fibroadenoma mutations are present in stromal but not epithelial mammary cells. Expression profiling of MED12-mutated and wild-type fibroadenomas revealed that MED12 mutations are associated with dysregulated estrogen signaling and extracellular matrix organization. The fibroadenoma MED12 mutation spectrum is nearly identical to that of previously reported MED12 lesions in uterine leiomyoma but not those of other tumors. Benign tumors of the breast and uterus, both of which are key target tissues of estrogen, may thus share a common genetic basis underpinned by highly frequent and specific MED12 mutations.

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Year:  2014        PMID: 25038752     DOI: 10.1038/ng.3037

Source DB:  PubMed          Journal:  Nat Genet        ISSN: 1061-4036            Impact factor:   38.330


  36 in total

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Journal:  Nucleic Acids Res       Date:  2001-01-01       Impact factor: 16.971

2.  Simpleaffy: a BioConductor package for Affymetrix Quality Control and data analysis.

Authors:  Claire L Wilson; Crispin J Miller
Journal:  Bioinformatics       Date:  2005-08-02       Impact factor: 6.937

3.  Distinction of phyllodes tumor from fibroadenoma: a reappraisal of an old problem.

Authors:  S Krishnamurthy; R Ashfaq; H J Shin; N Sneige
Journal:  Cancer       Date:  2000-12-25       Impact factor: 6.860

4.  Mary Lyon and the hypothesis of random X chromosome inactivation.

Authors:  Peter S Harper
Journal:  Hum Genet       Date:  2011-08       Impact factor: 4.132

5.  Absence of genetic abnormalities in fibroadenomas of the breast determined at p53 gene mutations and microsatellite alterations.

Authors:  N Franco; S F Picard; F Mege; L Arnould; S Lizard-Nacol
Journal:  Cancer Res       Date:  2001-11-01       Impact factor: 12.701

Review 6.  Functional role of estrogen metabolism in target cells: review and perspectives.

Authors:  B T Zhu; A H Conney
Journal:  Carcinogenesis       Date:  1998-01       Impact factor: 4.944

7.  Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles.

Authors:  Aravind Subramanian; Pablo Tamayo; Vamsi K Mootha; Sayan Mukherjee; Benjamin L Ebert; Michael A Gillette; Amanda Paulovich; Scott L Pomeroy; Todd R Golub; Eric S Lander; Jill P Mesirov
Journal:  Proc Natl Acad Sci U S A       Date:  2005-09-30       Impact factor: 11.205

8.  Long-term risk of breast cancer in women with fibroadenoma.

Authors:  W D Dupont; D L Page; F F Parl; C L Vnencak-Jones; W D Plummer; M S Rados; P A Schuyler
Journal:  N Engl J Med       Date:  1994-07-07       Impact factor: 91.245

9.  Clonal analysis of fibroadenoma and phyllodes tumor of the breast.

Authors:  S Noguchi; K Motomura; H Inaji; S Imaoka; H Koyama
Journal:  Cancer Res       Date:  1993-09-01       Impact factor: 12.701

10.  An integrated map of genetic variation from 1,092 human genomes.

Authors:  Goncalo R Abecasis; Adam Auton; Lisa D Brooks; Mark A DePristo; Richard M Durbin; Robert E Handsaker; Hyun Min Kang; Gabor T Marth; Gil A McVean
Journal:  Nature       Date:  2012-11-01       Impact factor: 49.962

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  69 in total

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Authors:  Eugenia V Broude; Balázs Győrffy; Alexander A Chumanevich; Mengqian Chen; Martina S J McDermott; Michael Shtutman; James F Catroppo; Igor B Roninson
Journal:  Curr Cancer Drug Targets       Date:  2015       Impact factor: 3.428

2.  Mutational Heterogeneity of MED23 Gene in Colorectal Cancers.

Authors:  Yun Sol Jo; Min Sung Kim; Sug Hyung Lee; Nam Jin Yoo
Journal:  Pathol Oncol Res       Date:  2015-07-08       Impact factor: 3.201

3.  Morphologic and genetic heterogeneity in breast fibroepithelial lesions-a comprehensive mapping study.

Authors:  Benjamin Yongcheng Tan; Nur Diyana Md Nasir; Huan Ying Chang; Cedric Chuan Young Ng; Peiyong Guan; Sanjanaa Nagarajan; Vikneswari Rajasegaran; Jing Yi Lee; Jing Quan Lim; Aye Aye Thike; Bin Tean Teh; Puay Hoon Tan
Journal:  Mod Pathol       Date:  2020-04-22       Impact factor: 7.842

4.  Myxoid fibroadenomas differ from conventional fibroadenomas: a hypothesis-generating study.

Authors:  John R Lozada; Kathleen A Burke; Aoife Maguire; Fresia Pareja; Raymond S Lim; Jisun Kim; Rodrigo Gularte-Merida; Melissa P Murray; Edi Brogi; Britta Weigelt; Jorge S Reis-Filho; Felipe C Geyer
Journal:  Histopathology       Date:  2017-07-05       Impact factor: 5.087

5.  Frameshift Mutation of MED25, a Transcription Regulator, and its Mutational Heterogeneity in Colorectal Cancers.

Authors:  Yun Sol Jo; Min Sung Kim; Nam Jin Yoo; Sug Hyung Lee
Journal:  Pathol Oncol Res       Date:  2016-07-12       Impact factor: 3.201

6.  Whole-exome sequencing identifies recurrent AKT1 mutations in sclerosing hemangioma of lung.

Authors:  Seung-Hyun Jung; Min Sung Kim; Sung-Hak Lee; Hyun-Chun Park; Hyun Joo Choi; Leeso Maeng; Ki Ouk Min; Jeana Kim; Tae In Park; Ok Ran Shin; Tae-Jung Kim; Haidong Xu; Kyo Young Lee; Tae-Min Kim; Sang Yong Song; Charles Lee; Yeun-Jun Chung; Sug Hyung Lee
Journal:  Proc Natl Acad Sci U S A       Date:  2016-09-06       Impact factor: 11.205

7.  Size and heterologous elements predict metastases in malignant phyllodes tumours of the breast.

Authors:  Valerie Cui Yun Koh; Aye Aye Thike; Nur Diyana Md Nasir; George Wai Cheong Yip; Boon Huat Bay; Puay Hoon Tan
Journal:  Virchows Arch       Date:  2017-11-10       Impact factor: 4.064

Review 8.  Fibroepithelial lesions revisited: implications for diagnosis and management.

Authors:  Puay Hoon Tan
Journal:  Mod Pathol       Date:  2020-05-27       Impact factor: 7.842

9.  Integrated genomic characterization of IDH1-mutant glioma malignant progression.

Authors:  Hanwen Bai; Akdes Serin Harmancı; E Zeynep Erson-Omay; Jie Li; Süleyman Coşkun; Matthias Simon; Boris Krischek; Koray Özduman; S Bülent Omay; Eric A Sorensen; Şevin Turcan; Mehmet Bakırcığlu; Geneive Carrión-Grant; Phillip B Murray; Victoria E Clark; A Gulhan Ercan-Sencicek; James Knight; Leman Sencar; Selin Altınok; Leon D Kaulen; Burcu Gülez; Marco Timmer; Johannes Schramm; Ketu Mishra-Gorur; Octavian Henegariu; Jennifer Moliterno; Angeliki Louvi; Timothy A Chan; Stacey L Tannheimer; M Necmettin Pamir; Alexander O Vortmeyer; Kaya Bilguvar; Katsuhito Yasuno; Murat Günel
Journal:  Nat Genet       Date:  2015-11-30       Impact factor: 38.330

10.  Uterine adenosarcomas are mesenchymal neoplasms.

Authors:  Salvatore Piscuoglio; Kathleen A Burke; Charlotte K Y Ng; Anastasios D Papanastasiou; Felipe C Geyer; Gabriel S Macedo; Luciano G Martelotto; Ino de Bruijn; Maria R De Filippo; Anne M Schultheis; Rafael A Ioris; Douglas A Levine; Robert A Soslow; Brian P Rubin; Jorge S Reis-Filho; Britta Weigelt
Journal:  J Pathol       Date:  2015-12-28       Impact factor: 7.996

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