Literature DB >> 25038632

Hydrogen bond coupling in sodium dihydrogen triacetate.

Ashour A Ahmed1, Rifaat H Hilal, Mohamed F Shibl.   

Abstract

The coupling of hydrogen bonds is central to structures and functions of biological systems. Hydrogen bond coupling in sodium dihydrogen triacetate (SDHTA) is investigated as a model for the hydrogen bonded systems of the type O-H…O. The two-dimensional potential energy surface is derived from the full-dimensional one by selecting the relevant vibrational modes of the hydrogen bonds. The potential energy surfaces in terms of normal modes describing the anharmonic motion in the vicinity of the equilibrium geometry of SDHTA are calculated for the different species, namely, HH, HD, DH, and DD isotopomers. The ground state wave functions and their relation to the hydrogen bond structural parameters are discussed. It has been found that the hydrogen bonds in SDHTA are uncoupled, that is elongation of the deuterated hydrogen bond does not affect the non-deuterated one.

Entities:  

Year:  2014        PMID: 25038632     DOI: 10.1007/s00894-014-2363-9

Source DB:  PubMed          Journal:  J Mol Model        ISSN: 0948-5023            Impact factor:   1.810


  7 in total

1.  Protein crystallography with neutrons--status and perspectives.

Authors:  T Gutberlet ; U Heinemann; M Steiner
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2001-02

2.  Geometric H/D isotope effects and cooperativity of the hydrogen bonds in porphycene.

Authors:  Mohamed F Shibl; Mariusz Pietrzak; Hans-Heinrich Limbach; Oliver Kühn
Journal:  Chemphyschem       Date:  2007-02-02       Impact factor: 3.102

3.  Cooperativity between OH...O and CH...O hydrogen bonds involving dimethyl sulfoxide-H2O-H2O complex.

Authors:  Qingzhong Li; Xiulin An; Baoan Gong; Jianbo Cheng
Journal:  J Phys Chem A       Date:  2007-09-14       Impact factor: 2.781

4.  Localizing normal modes in large molecules.

Authors:  Christoph R Jacob; Markus Reiher
Journal:  J Chem Phys       Date:  2009-02-28       Impact factor: 3.488

5.  Analysis of secondary structure effects on the IR and Raman spectra of polypeptides in terms of localized vibrations.

Authors:  Christoph R Jacob; Sandra Luber; Markus Reiher
Journal:  J Phys Chem B       Date:  2009-05-07       Impact factor: 2.991

6.  The geometric (H/D) isotope effect in porphycene: grid-based Born-Oppenheimer vibrational wavefunctions vs. multi-component molecular orbital theory.

Authors:  M F Shibl; M Tachikawa; O Kühn
Journal:  Phys Chem Chem Phys       Date:  2005-04-07       Impact factor: 3.676

7.  Characterization of fluxional hydrogen-bonded complexes of acetic acid and acetate by NMR: geometries and isotope and solvent effects.

Authors:  Peter M Tolstoy; Parwin Schah-Mohammedi; Sergei N Smirnov; Nikolai S Golubev; Gleb S Denisov; Hans-Heinrich Limbach
Journal:  J Am Chem Soc       Date:  2004-05-05       Impact factor: 15.419

  7 in total

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