Literature DB >> 25035493

Human tRNA synthetase catalytic nulls with diverse functions.

Wing-Sze Lo1, Elisabeth Gardiner2, Zhiwen Xu1, Ching-Fun Lau1, Feng Wang1, Jie J Zhou1, John D Mendlein3, Leslie A Nangle3, Kyle P Chiang3, Xiang-Lei Yang4, Kin-Fai Au5, Wing Hung Wong6, Min Guo7, Mingjie Zhang8, Paul Schimmel9.   

Abstract

Genetic efficiency in higher organisms depends on mechanisms to create multiple functions from single genes. To investigate this question for an enzyme family, we chose aminoacyl tRNA synthetases (AARSs). They are exceptional in their progressive and accretive proliferation of noncatalytic domains as the Tree of Life is ascended. Here we report discovery of a large number of natural catalytic nulls (CNs) for each human AARS. Splicing events retain noncatalytic domains while ablating the catalytic domain to create CNs with diverse functions. Each synthetase is converted into several new signaling proteins with biological activities "orthogonal" to that of the catalytic parent. We suggest that splice variants with nonenzymatic functions may be more general, as evidenced by recent findings of other catalytically inactive splice-variant enzymes.
Copyright © 2014, American Association for the Advancement of Science.

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Year:  2014        PMID: 25035493      PMCID: PMC4188629          DOI: 10.1126/science.1252943

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  32 in total

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Authors:  K Wakasugi; P Schimmel
Journal:  Science       Date:  1999-04-02       Impact factor: 47.728

2.  Genetic code expansion.

Authors:  Richard Giegé
Journal:  Nat Struct Biol       Date:  2003-06

Review 3.  The evolving roles of alternative splicing.

Authors:  Liana F Lareau; Richard E Green; Rajiv S Bhatnagar; Steven E Brenner
Journal:  Curr Opin Struct Biol       Date:  2004-06       Impact factor: 6.809

Review 4.  Aminoacyl-tRNAs: setting the limits of the genetic code.

Authors:  Michael Ibba; Dieter Söll
Journal:  Genes Dev       Date:  2004-04-01       Impact factor: 11.361

Review 5.  Aminoacyl-tRNA synthetases.

Authors:  S Cusack
Journal:  Curr Opin Struct Biol       Date:  1997-12       Impact factor: 6.809

Review 6.  Cognition, mechanism, and evolutionary relationships in aminoacyl-tRNA synthetases.

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Journal:  Annu Rev Biochem       Date:  1993       Impact factor: 23.643

7.  Partition of tRNA synthetases into two classes based on mutually exclusive sets of sequence motifs.

Authors:  G Eriani; M Delarue; O Poch; J Gangloff; D Moras
Journal:  Nature       Date:  1990-09-13       Impact factor: 49.962

8.  A human aminoacyl-tRNA synthetase as a regulator of angiogenesis.

Authors:  Keisuke Wakasugi; Bonnie M Slike; John Hood; Atsushi Otani; Karla L Ewalt; Martin Friedlander; David A Cheresh; Paul Schimmel
Journal:  Proc Natl Acad Sci U S A       Date:  2002-01-02       Impact factor: 11.205

9.  VE-cadherin links tRNA synthetase cytokine to anti-angiogenic function.

Authors:  Eleni Tzima; John S Reader; Mohamad Irani-Tehrani; Karla L Ewalt; Martin A Schwartz; Paul Schimmel
Journal:  J Biol Chem       Date:  2004-12-03       Impact factor: 5.157

10.  Construction and analysis of deletions in the amino-terminal extension of glutamine tRNA synthetase of Saccharomyces cerevisiae.

Authors:  S W Ludmerer; P Schimmel
Journal:  J Biol Chem       Date:  1987-08-05       Impact factor: 5.157

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  61 in total

Review 1.  Quality Control Pathways for Nucleus-Encoded Eukaryotic tRNA Biosynthesis and Subcellular Trafficking.

Authors:  Anita K Hopper; Hsiao-Yun Huang
Journal:  Mol Cell Biol       Date:  2015-04-06       Impact factor: 4.272

2.  Splicing: Catalytic nulls keep busy.

Authors:  Eytan Zlotorynski
Journal:  Nat Rev Mol Cell Biol       Date:  2014-08-06       Impact factor: 94.444

Review 3.  Stress Response and Adaptation Mediated by Amino Acid Misincorporation during Protein Synthesis.

Authors:  Xiaoyun Wang; Tao Pan
Journal:  Adv Nutr       Date:  2016-07-15       Impact factor: 8.701

Review 4.  Identification and characterization of sORF-encoded polypeptides.

Authors:  Qian Chu; Jiao Ma; Alan Saghatelian
Journal:  Crit Rev Biochem Mol Biol       Date:  2015-04-10       Impact factor: 8.250

Review 5.  The emerging complexity of the tRNA world: mammalian tRNAs beyond protein synthesis.

Authors:  Paul Schimmel
Journal:  Nat Rev Mol Cell Biol       Date:  2017-09-06       Impact factor: 94.444

6.  Structural control of caspase-generated glutamyl-tRNA synthetase by appended noncatalytic WHEP domains.

Authors:  Dalia Halawani; Valentin Gogonea; Joseph A DiDonato; Vitaliy Pipich; Peng Yao; Arnab China; Celalettin Topbas; Kommireddy Vasu; Abul Arif; Stanley L Hazen; Paul L Fox
Journal:  J Biol Chem       Date:  2018-04-11       Impact factor: 5.157

7.  The Werner syndrome RECQ helicase targets G4 DNA in human cells to modulate transcription.

Authors:  Weiliang Tang; Ana I Robles; Richard P Beyer; Lucas T Gray; Giang H Nguyen; Junko Oshima; Nancy Maizels; Curtis C Harris; Raymond J Monnat
Journal:  Hum Mol Genet       Date:  2016-03-16       Impact factor: 6.150

8.  Matrix metalloproteinases inactivate the proinflammatory functions of secreted moonlighting tryptophanyl-tRNA synthetase.

Authors:  Parker G Jobin; Nestor Solis; Yoan Machado; Peter A Bell; Nam Hoon Kwon; Sunghoon Kim; Christopher M Overall; Georgina S Butler
Journal:  J Biol Chem       Date:  2019-07-19       Impact factor: 5.157

Review 9.  Discovery and characterization of smORF-encoded bioactive polypeptides.

Authors:  Alan Saghatelian; Juan Pablo Couso
Journal:  Nat Chem Biol       Date:  2015-12       Impact factor: 15.040

10.  Active JNK-dependent secretion of Drosophila Tyrosyl-tRNA synthetase by loser cells recruits haemocytes during cell competition.

Authors:  Sergio Casas-Tintó; Fidel-Nicolás Lolo; Eduardo Moreno
Journal:  Nat Commun       Date:  2015-12-11       Impact factor: 14.919

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