Literature DB >> 25024063

Open source software in a practical approach for post processing of radiologic images.

Gianluca Valeri1, Francesco Antonino Mazza, Stefania Maggi, Daniele Aramini, Luigi La Riccia, Giovanni Mazzoni, Andrea Giovagnoni.   

Abstract

PURPOSE: The purpose of this paper is to evaluate the use of open source software (OSS) to process DICOM images.
MATERIALS AND METHODS: We selected 23 programs for Windows and 20 programs for Mac from 150 possible OSS programs including DICOM viewers and various tools (converters, DICOM header editors, etc.). The programs selected all meet the basic requirements such as free availability, stand-alone application, presence of graphical user interface, ease of installation and advanced features beyond simple display monitor. Capabilities of data import, data export, metadata, 2D viewer, 3D viewer, support platform and usability of each selected program were evaluated on a scale ranging from 1 to 10 points.
RESULTS: Twelve programs received a score higher than or equal to eight. Among them, five obtained a score of 9: 3D Slicer, MedINRIA, MITK 3M3, VolView, VR Render; while OsiriX received 10.
CONCLUSIONS: OsiriX appears to be the only program able to perform all the operations taken into consideration, similar to a workstation equipped with proprietary software, allowing the analysis and interpretation of images in a simple and intuitive way. OsiriX is a DICOM PACS workstation for medical imaging and software for image processing for medical research, functional imaging, 3D imaging, confocal microscopy and molecular imaging. This application is also a good tool for teaching activities because it facilitates the attainment of learning objectives among students and other specialists.

Entities:  

Mesh:

Year:  2014        PMID: 25024063     DOI: 10.1007/s11547-014-0437-5

Source DB:  PubMed          Journal:  Radiol Med        ISSN: 0033-8362            Impact factor:   3.469


  15 in total

1.  Informatics in radiology (infoRAD): free DICOM image viewing and processing software for the Macintosh computer: what's available and what it can do for you.

Authors:  Edward J Escott; David Rubinstein
Journal:  Radiographics       Date:  2004 Nov-Dec       Impact factor: 5.333

2.  The medical imaging interaction toolkit.

Authors:  Ivo Wolf; Marcus Vetter; Ingmar Wegner; Thomas Böttger; Marco Nolden; Max Schöbinger; Mark Hastenteufel; Tobias Kunert; Hans-Peter Meinzer
Journal:  Med Image Anal       Date:  2005-12       Impact factor: 8.545

Review 3.  Open-source software for radiologists: a primer.

Authors:  A F Scarsbrook
Journal:  Clin Radiol       Date:  2007-02       Impact factor: 2.350

4.  Free DICOM image viewing and processing software for your desktop computer: what's available and what it can do for you.

Authors:  Edward J Escott; David Rubinstein
Journal:  Radiographics       Date:  2003 Sep-Oct       Impact factor: 5.333

5.  Advances in medical image computing.

Authors:  T Tolxdorff; T M Deserno; H Handels; H-P Meinzer
Journal:  Methods Inf Med       Date:  2009       Impact factor: 2.176

6.  Open source and healthcare in Europe - time to put leading edge ideas into practice.

Authors:  Peter J Murray; Graham Wright; Thomas Karopka; Helen Betts; Andrej Orel
Journal:  Stud Health Technol Inform       Date:  2009

7.  Virtual liver resection and volumetric analysis of the future liver remnant using open source image processing software.

Authors:  Joost R van der Vorst; Ronald M van Dam; Rogier S A van Stiphout; Maartje A van den Broek; Ilona H Hollander; Alfons G H Kessels; Cornelis H C Dejong
Journal:  World J Surg       Date:  2010-10       Impact factor: 3.352

8.  BRISC-an open source pulmonary nodule image retrieval framework.

Authors:  Michael O Lam; Tim Disney; Daniela S Raicu; Jacob Furst; David S Channin
Journal:  J Digit Imaging       Date:  2007-08-14       Impact factor: 4.056

9.  Prospective volumetric assessment of the liver on a personal computer by nonradiologists prior to partial hepatectomy.

Authors:  Simon A W G Dello; Jan H M B Stoot; Rogier S A van Stiphout; Johanne G Bloemen; Stephen J Wigmore; Cornelis H C Dejong; Ronald M van Dam
Journal:  World J Surg       Date:  2011-02       Impact factor: 3.352

10.  Open source in imaging informatics.

Authors:  Paul Nagy
Journal:  J Digit Imaging       Date:  2007-08-03       Impact factor: 4.056

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  18 in total

Review 1.  Comprehensive Review of 3D Segmentation Software Tools for MRI Usable for Pelvic Surgery Planning.

Authors:  Alessio Virzì; Cécile Olivia Muller; Jean-Baptiste Marret; Eva Mille; Laureline Berteloot; David Grévent; Nathalie Boddaert; Pietro Gori; Sabine Sarnacki; Isabelle Bloch
Journal:  J Digit Imaging       Date:  2020-02       Impact factor: 4.056

2.  Implementation, reliability, and feasibility test of an Open-Source PACS.

Authors:  Gianluca Valeri; Matteo Zuccaccia; Andrea Badaloni; Damiano Ciriaci; Luigi La Riccia; Giovanni Mazzoni; Stefania Maggi; Andrea Giovagnoni
Journal:  Radiol Med       Date:  2015-06-19       Impact factor: 3.469

3.  Free DICOM-Viewers for Veterinary Medicine : Survey and Comparison of Functionality and User-Friendliness of Medical Imaging PACS-DICOM-Viewer Freeware for Specific Use in Veterinary Medicine Practices.

Authors:  Andreas Brühschwein; Julius Klever; Anne-Sophie Hoffmann; Denise Huber; Elisabeth Kaufmann; Sven Reese; Andrea Meyer-Lindenberg
Journal:  J Digit Imaging       Date:  2020-02       Impact factor: 4.056

4.  Visualization, measurement and modelling of the cochlea using rotating midmodiolar slice planes.

Authors:  G Jakob Lexow; Daniel Schurzig; Nils-Claudius Gellrich; Thomas Lenarz; Omid Majdani; Thomas S Rau
Journal:  Int J Comput Assist Radiol Surg       Date:  2016-03-19       Impact factor: 2.924

5.  Morphological and Volumetric Assessment of Cerebral Ventricular System with 3D Slicer Software.

Authors:  Miguel Gonzalo Domínguez; Cristina Hernández; Pablo Ruisoto; Juan A Juanes; Alberto Prats; Tomás Hernández
Journal:  J Med Syst       Date:  2016-05-05       Impact factor: 4.460

6.  Advantages and Disadvantages in Image Processing with Free Software in Radiology.

Authors:  Katrin Muradas Mujika; Juan Antonio Juanes Méndez; Andrés Framiñan de Miguel
Journal:  J Med Syst       Date:  2018-01-15       Impact factor: 4.460

7.  Multi-center study finds postoperative residual non-enhancing component of glioblastoma as a new determinant of patient outcome.

Authors:  Aikaterini Kotrotsou; Ahmed Elakkad; Jia Sun; Ginu A Thomas; Dongni Yang; Srishti Abrol; Wei Wei; Jeffrey S Weinberg; Ali S Bakhtiari; Moritz F Kircher; Markus M Luedi; John F de Groot; Raymond Sawaya; Ashok J Kumar; Pascal O Zinn; Rivka R Colen
Journal:  J Neurooncol       Date:  2018-04-04       Impact factor: 4.130

8.  Tumor image-derived texture features are associated with CD3 T-cell infiltration status in glioblastoma.

Authors:  Shivali Narang; Donnie Kim; Sathvik Aithala; Amy B Heimberger; Salmaan Ahmed; Dinesh Rao; Ganesh Rao; Arvind Rao
Journal:  Oncotarget       Date:  2017-09-05

9.  Structural and functional analyses of the optic nerve and lateral geniculate nucleus in glaucoma.

Authors:  Rafael Lacerda Furlanetto; Sergio Henrique Teixeira; Carolina Pelegrini Barbosa Gracitelli; Claudio Luiz Lottenberg; Fabiano Emori; Michel Michelan; Edson Amaro; Augusto Paranhos
Journal:  PLoS One       Date:  2018-03-23       Impact factor: 3.240

10.  PACS for Bhutan: a cost effective open source architecture for emerging countries.

Authors:  Osman Ratib; Nicolas Roduit; Dechen Nidup; Gerard De Geer; Antoine Rosset; Antoine Geissbuhler
Journal:  Insights Imaging       Date:  2016-07-28
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