Literature DB >> 24995601

Next generation sequencing technology: Advances and applications.

H P J Buermans1, J T den Dunnen2.   

Abstract

Impressive progress has been made in the field of Next Generation Sequencing (NGS). Through advancements in the fields of molecular biology and technical engineering, parallelization of the sequencing reaction has profoundly increased the total number of produced sequence reads per run. Current sequencing platforms allow for a previously unprecedented view into complex mixtures of RNA and DNA samples. NGS is currently evolving into a molecular microscope finding its way into virtually every fields of biomedical research. In this chapter we review the technical background of the different commercially available NGS platforms with respect to template generation and the sequencing reaction and take a small step towards what the upcoming NGS technologies will bring. We close with an overview of different implementations of NGS into biomedical research. This article is part of a Special Issue entitled: From Genome to Function.
Copyright © 2014 Elsevier B.V. All rights reserved.

Keywords:  Applications; Basic technology; Nanopore; Next generation sequencing; Sequence by synthesis; Single molecule sequencing

Year:  2014        PMID: 24995601     DOI: 10.1016/j.bbadis.2014.06.015

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  154 in total

Review 1.  Next-generation sequencing in clinical virology: Discovery of new viruses.

Authors:  Sibnarayan Datta; Raghvendra Budhauliya; Bidisha Das; Soumya Chatterjee; Vijay Veer
Journal:  World J Virol       Date:  2015-08-12

2.  Sensing Enzymatic Activity by Exposure and Selection of DNA-Encoded Probes.

Authors:  Rachael R Jetson; Casey J Krusemark
Journal:  Angew Chem Int Ed Engl       Date:  2016-06-29       Impact factor: 15.336

3.  Next-generation Sequencing (NGS) Analysis on Single Circulating Tumor Cells (CTCs) with No Need of Whole-genome Amplification (WGA).

Authors:  Raffaele Palmirotta; Domenica Lovero; Erica Silvestris; Claudia Felici; Davide Quaresmini; Paola Cafforio; Franco Silvestris
Journal:  Cancer Genomics Proteomics       Date:  2017 May-Jun       Impact factor: 4.069

4.  Profiling of the dynamically alteredgene expression in peripheral nerve injury using NGS RNA sequencing technique.

Authors:  Duanyang Han; Yixun Chen; Yuhui Kou; Jian Weng; Bo Chen; Youlai Yu; Peixun Zhang; Baoguo Jiang
Journal:  Am J Transl Res       Date:  2016-02-15       Impact factor: 4.060

Review 5.  Mixed HCV infection and reinfection in people who inject drugs--impact on therapy.

Authors:  Evan B Cunningham; Tanya L Applegate; Andrew R Lloyd; Gregory J Dore; Jason Grebely
Journal:  Nat Rev Gastroenterol Hepatol       Date:  2015-03-17       Impact factor: 46.802

6.  New splicing mutation in the choline kinase beta (CHKB) gene causing a muscular dystrophy detected by whole-exome sequencing.

Authors:  Jorge Oliveira; Luís Negrão; Isabel Fineza; Ricardo Taipa; Manuel Melo-Pires; Ana Maria Fortuna; Ana Rita Gonçalves; Hugo Froufe; Conceição Egas; Rosário Santos; Mário Sousa
Journal:  J Hum Genet       Date:  2015-03-05       Impact factor: 3.172

7.  Effects of Nanopore Charge Decorations on the Translocation Dynamics of DNA.

Authors:  Ining Jou; Murugappan Muthukumar
Journal:  Biophys J       Date:  2017-10-17       Impact factor: 4.033

8.  Physical and chemical template-blocking strategies in the exponential amplification reaction of circulating microRNAs.

Authors:  Michael P Trinh; Jocelyn G Carballo; Gary B Adkins; Kaizhu Guo; Wenwan Zhong
Journal:  Anal Bioanal Chem       Date:  2020-02-19       Impact factor: 4.142

Review 9.  Whole-Genome Sequencing of Bacterial Pathogens: the Future of Nosocomial Outbreak Analysis.

Authors:  Scott Quainoo; Jordy P M Coolen; Sacha A F T van Hijum; Martijn A Huynen; Willem J G Melchers; Willem van Schaik; Heiman F L Wertheim
Journal:  Clin Microbiol Rev       Date:  2017-10       Impact factor: 26.132

Review 10.  Next Generation Sequencing and Bioinformatics Analysis of Family Genetic Inheritance.

Authors:  Aquillah M Kanzi; James Emmanuel San; Benjamin Chimukangara; Eduan Wilkinson; Maryam Fish; Veron Ramsuran; Tulio de Oliveira
Journal:  Front Genet       Date:  2020-10-23       Impact factor: 4.599

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.