| Literature DB >> 24991178 |
Chun Yang1, Huajie Ba2, Zhiqin Gao1, Hanqing Zhao1, Haiying Yu1, Wei Guo1.
Abstract
BACKGROUND: Analysis of genetic polymorphisms in short tandem repeats (STRs) is an accepted method for detecting associations between genotype and phenotype but it has not previously been used in the study of the genetics of impulsive violent behavior.Entities:
Year: 2013 PMID: 24991178 PMCID: PMC4054583 DOI: 10.3969/j.issn.1002-0829.2013.06.004
Source DB: PubMed Journal: Shanghai Arch Psychiatry ISSN: 1002-0829
The chromosomal location of the 15 short tandem repeats (STRs) loci
| STR Loci | Location on chromosome |
| D8S1179 | 8 |
| D21S11 | 21q11.2-q21 |
| D7S820 | 7q11 |
| CSF1PO | 5q33.3-34 |
| D3S1358 | 3p |
| D2S1338 | 2q35-37.1 |
| D19S433 | 19q12-13.1 |
| vWA | 12p12-peter |
| TPOX | 2p23-2per |
| D18S51 | 18q21.3 |
| D5S818 | 5q21-23 |
| FGA | 4q28 |
| D13S317 | 13q22-31 |
| TH01 | 11p15.5 |
| D16S539 | 16q24-qter |
Figure 1.Flow chart of the study
Comparison of TH01 locus allele frequencies among men with impulsive violent behavior (cases) and men without impulsive violent behavior (controls) in a Han Chinese population
| alleles | allele frequenciesa | statistic | p-valueb | odds ratio | 95%CI | |
| cases (n=407) | controls (n=415) | |||||
| 6 | 100 (12.3%) | 76 (9.2%) | 0.0402 | 1.39 | 1.01-1.90 | |
| 7 | 198 (24.3%) | 206 (24.8%) | 0.8190 | 0.97 | 0.78-1.22 | |
| 8 | 36 (4.4%) | 35 (4.2%) | 0.9036 | 1.05 | 0.65-1.69 | |
| 9 | 430 (52.8%) | 445 (53.6%) | 0.7669 | 0.97 | 0.80-1.18 | |
| 9.3 | 36 (4.4%) | 20 (2.4%) | 0.0245 | 1.87 | 1.08-3.27 | |
| 10 | 14 (1.7%) | 48 (5.8%) | <0.0001 | 0.29 | 0.16-0.52 | |
| Total | 814 (100%) | 830 (100%) | ---- | ---- | ---- | ---- |
a 2x6 χ=26.7, p<0.001
b p<0.0083 was considered statistically significant
Comparison of FGA locus allele frequencies among men with impulsive violent behavior (cases) and men without impulsive violent behavior (controls) in a Han Chinese population
| alleles | allele frequenciesa | statistic | p-valueb | odds ratio | 95%CI | |
| cases (n=407) | controls (n=415) | |||||
| 15.2 | 0 (0.0%) | 2 (0.2%) | exact test | 0.4997 | ---- | ---- |
| 17 | 4 (0.5%) | 0 (0.0%) | exact test | 0.0599 | ---- | ---- |
| 18 | 30 (3.7%) | 16 (1.9%) | 0.0307 | 1.95 | 1.05-3.60 | |
| 19 | 38 (4.7%) | 28 (3.4%) | 0.1812 | 1.40 | 0.85-2.31 | |
| 19.2 | 2 (0.3%) | 0 (0.0%) | exact test | 0.2450 | ---- | ---- |
| 20 | 34 (4.2%) | 44 (5.3%) | 0.2837 | 0.78 | 0.49-1.23 | |
| 21 | 75 (9.2%) | 100 (12.3%) | 0.0624 | 0.74 | 0.54-1.02 | |
| 21.2 | 2 (0.3%) | 0 (0.0%) | exact test | 0.2450 | ---- | ---- |
| 22 | 146 (17.9%) | 136 (16.4%) | 0.4044 | 1.11 | 0.86-1.44 | |
| 22.2 | 6 (0.7%) | 4 (0.5%) | exact test | 0.5059 | 1.53 | 0.43-5.45 |
| 23 | 176 (21.6%) | 223 (16.9%) | 0.0131 | 0.75 | 0.60-0.94 | |
| 23.2 | 4 (0.5%) | 6 (0.7%) | exact test | 0.5461 | 0.68 | 0.19-2.41 |
| 24 | 141 (17.3%) | 140 (16.9%) | 0.8067 | 1.03 | 0.80-1.33 | |
| 24.2 | 6 (0.7%) | 8 (1.0%) | 0.6169 | 0.76 | 0.26-2.21 | |
| 25 | 98 (12.0%) | 76 (9.2%) | 0.0575 | 1.38 | 0.99-1.86 | |
| 25.2 | 2 (0.3%) | 0 (0.0%) | exact test | 0.2450 | ---- | ---- |
| 26 | 38 (4.7) | 40 (4.8%) | 0.8855 | 0.97 | 0.61-1.52 | |
| 27 | 8 (1.0%) | 5 (0.6%) | 0.3840 | 1.64 | 0.53-5.03 | |
| 28 | 4 (0.5%) | 0 (0.0%) | exact test | 0.0599 | ---- | ---- |
| 29 | 0 (0.0%) | 2 (0.2%) | exact test | 0.4997 | ---- | ---- |
| Total | 814 (100%) | 830 (100%) | ---- | ---- | ---- | ---- |
a 2x20 χ=38.98, p=0.0044
b p<0.0025 was considered statistically significant
Comparison of TPOX locus allele frequencies among men with impulsive violent behavior (cases) and men without impulsive violent behavior (controls) in a Han Chinese population
| alleles | allele frequenciesa | statistic | p-valueb | odds ratio | 95%CI | |
| cases (n=407) | controls (n=415) | |||||
| 7 | 2 (0.3%) | 0 (0.0%) | exact test | 0.2450 | ---- | ---- |
| 8 | 400 (49.1%) | 479 (57.7%) | 0.0005 | 0.71 | 0.58-0.86 | |
| 9 | 72 (8.9%) | 108 (13.0%) | 0.0072 | 0.65 | 0.47-0.89 | |
| 10 | 22 (2.7%) | 20 (2.4%) | 0.7065 | 1.13 | 0.61-2.08 | |
| 11 | 294 (36.1%) | 199 (24.0%) | <0.0001 | 1.79 | 1.45-2.22 | |
| 12 | 24 (3.0%) | 24 (2.9%) | 0.9454 | 1.02 | 0.57-1.81 | |
| Total | 814 (100%) | 830 (100%) | ---- | ---- | ---- | ---- |
a 2x6 χ=34.6, p<0.001
b p<0.0083 was considered statistically significant
Comparison of CSF1PO locus allele frequencies among men with impulsive violent behavior (cases) and men without impulsive violent behavior (controls) in a Han Chinese population
| alleles | allele frequenciesa | statistic | p-valueb | odds ratio | 95%CI | |
| cases (n=407) | controls (n=415) | |||||
| 7 | 0 (0.0%) | 2 (0.2%) | exact test | 0.4997 | ---- | ---- |
| 8 | 2 (0.3%) | 0 (0.0%) | exact test | 0.2450 | ---- | ---- |
| 9 | 26 (3.2%) | 30 (3.6%) | 0.6385 | 0.88 | 0.52-1.50 | |
| 10 | 162 (19.9%) | 208 (25.1%) | 0.0123 | 0.74 | 0.59-0.94 | |
| 11 | 218 (26.8%) | 227 (27.4%) | 0.7955 | 0.97 | 0.78-1.21 | |
| 12 | 332 (40.8%) | 291 (35.1%) | 0.0167 | 1.28 | 1.04-1.56 | |
| 13 | 66 (8.1%) | 50 (6.0%) | 0.0990 | 1.38 | 0.94-2.01 | |
| 14 | 6 (0.7%) | 22 (2.7%) | 0.0035 | 0.27 | 0.11-0.68 | |
| 15 | 2 (0.3%) | 0 (0.0%) | exact test | 0.2450 | ---- | ---- |
| Total | 814 (100%) | 830 (100%) | ---- | ---- | ---- | ---- |
a 2x9 χ=24.04, p=0.001
b p<0.0055 was considered statistically significant
Comparison of D3S1358 locus allele frequencies among men with impulsive violent behavior (cases) and men without impulsive violent behavior (controls) in a Han Chinese population
| alleles | allele frequenciesa | statistic | p-valueb | odds ratio | 95%CI | |
| cases (n=407) | controls (n=415) | |||||
| 12 | 6 (0.7%) | 0 (0.0%) | exact test | 0.0146 | ---- | ---- |
| 14 | 37 (4.6%) | 30 (3.6%) | 0.3398 | 1.27 | 0.78-2.08 | |
| 15 | 286 (35.1%) | 310 (37.4%) | 0.3504 | 0.91 | 0.74-1.11 | |
| 16 | 256 (31.5%) | 246 (29.6%) | 0.4253 | 1.09 | 0.88-1.34 | |
| 17 | 177 (21.7%) | 178 (21.5%) | 0.8830 | 1.02 | 0.80-1.29 | |
| 18 | 52 (6.4%) | 56 (6.8%) | 0.7691 | 0.94 | 0.64-1.39 | |
| 19 | 1 (0.1%) | 10 (1.2%) | exact test | 0.0115 | 0.10 | 0.01-0.79 |
| Total | 814 (100%) | 830 (100%) | ---- | ---- | ---- | ---- |
a 2x7 χ=15.34, p=0.0178
b p<0.0071 was considered statistically significant
Comparison of D13S317 locus allele frequencies among men with impulsive violent behavior (cases) and men without impulsive violent behavior (controls) in a Han Chinese population
| alleles | allele frequenciesa | statistic | p-valueb | odds ratio | 95%CI | |
| cases (n=407) | controls (n=415) | |||||
| 7 | 0 (0.0%) | 6 (0.7%) | exact test | 0.0310 | ---- | ---- |
| 8 | 206 (25.3%) | 257 (31.0%) | 0.0108 | 0.76 | 0.61-0.94 | |
| 9 | 118 (14.5%) | 104 (12.5%) | 0.2435 | 1.18 | 0.89-1.57 | |
| 10 | 118 (14.5%) | 124 (14.9%) | 0.7997 | 0.97 | 0.73-1.29 | |
| 11 | 182 (22.4%) | 188 (22.7%) | 0.8873 | 0.98 | 0.78-1.24 | |
| 12 | 138 (17.0%) | 108 (13.0%) | 0.0251 | 1.36 | 1.04-1.79 | |
| 13 | 42 (5.2%) | 35 (4.2%) | 0.3657 | 1.24 | 0.78-1.96 | |
| 14 | 10 (1.2%) | 8 (1.0%) | 0.6062 | 1.28 | 0.50-3.25 | |
| Total | 814 (100%) | 830 (100%) | ---- | ---- | ---- | ---- |
a 2x8 χ=17.11, p=0.0167
b p<0.0062 was considered statistically significant
Comparison of D18S51 locus allele frequencies among men with impulsive violent behavior (cases) and men without impulsive violent behavior (controls) in a Han Chinese population
| alleles | allele frequenciesa | statistic | p-valueb | odds ratio | 95%CI | |
| cases (n=407) | controls (n=415) | |||||
| 9 | 0 (0.0%) | 2 (0.2%) | exact test | 0.4997 | ---- | ---- |
| 11 | 2 (0.3%) | 0 (0.0%) | exact test | 0.2450 | ---- | ---- |
| 12 | 34 (4.2%) | 22 (2.7%) | 0.0880 | 1.60 | 0.92-2.76 | |
| 13 | 156 (19.2%) | 174 (21.0%) | 0.3625 | 0.89 | 0.70-1.14 | |
| 13.2 | 2 (0.3%) | 0 (0.0%) | exact test | 0.2450 | 1.00 | 0.99-1.00 |
| 14 | 172 (21.1%) | 149 (18.0%) | 0.1041 | 1.22 | 0.96-1.56 | |
| 15 | 137 (16.8%) | 144 (17.4%) | 0.7799 | 0.96 | 0.75-1.25 | |
| 16 | 133 (16.3%) | 104 (12.5%) | 0.0279 | 1.36 | 1.03-1.80 | |
| 17 | 54 (6.6%) | 72 (8.7%) | 0.1199 | 0.75 | 0.52-1.08 | |
| 18 | 36 (4.4%) | 44 (5.3%) | 0.4078 | 0.83 | 0.53-1.30 | |
| 19 | 28 (3.4%) | 54 (6.5%) | 0.0043 | 0.51 | 0.32-.82 | |
| 20 | 28 (3.4%) | 21 (2.5%) | 0.2782 | 1.3723 | 0.77-2.44 | |
| 21 | 12 (1.5%) | 22 (2.7%) | 0.0938 | 0.55 | 0.27-1.12 | |
| 22 | 10 (1.2%) | 16 (1.9%) | 0.2559 | 0.63 | 0.29-1.40 | |
| 23 | 6 (0.7%) | 6 (0.7%) | 0.9730 | 1.02 | 0.38-3.18 | |
| 24 | 2 (0.3%) | 0 (0.0%) | exact test | 0.2450 | ---- | ---- |
| 25 | 2 (0.3%) | 0 (0.0%) | exact test | 0.2450 | ---- | ---- |
| Total | 814 (100%) | 830 (100%) | ---- | ---- | ---- | ---- |
a 2x17 χ=35.71, p=0.0032
b p<0.0029 was considered statistically significant