Literature DB >> 24984772

Genetic variation and adaptation in Africa: implications for human evolution and disease.

Felicia Gomez1, Jibril Hirbo2, Sarah A Tishkoff2.   

Abstract

Because modern humans originated in Africa and have adapted to diverse environments, African populations have high levels of genetic and phenotypic diversity. Thus, genomic studies of diverse African ethnic groups are essential for understanding human evolutionary history and how this leads to differential disease risk in all humans. Comparative studies of genetic diversity within and between African ethnic groups creates an opportunity to reconstruct some of the earliest events in human population history and are useful for identifying patterns of genetic variation that have been influenced by recent natural selection. Here we describe what is currently known about genetic variation and evolutionary history of diverse African ethnic groups. We also describe examples of recent natural selection in African genomes and how these data are informative for understanding the frequency of many genetic traits, including those that cause disease susceptibility in African populations and populations of recent African descent.
Copyright © 2014 Cold Spring Harbor Laboratory Press; all rights reserved.

Entities:  

Mesh:

Substances:

Year:  2014        PMID: 24984772      PMCID: PMC4067985          DOI: 10.1101/cshperspect.a008524

Source DB:  PubMed          Journal:  Cold Spring Harb Perspect Biol        ISSN: 1943-0264            Impact factor:   10.005


  165 in total

1.  The ancestry of Brazilian mtDNA lineages.

Authors:  J Alves-Silva; M da Silva Santos; P E Guimarães; A C Ferreira; H J Bandelt; S D Pena; V F Prado
Journal:  Am J Hum Genet       Date:  2000-06-28       Impact factor: 11.025

2.  Strong maternal Khoisan contribution to the South African coloured population: a case of gender-biased admixture.

Authors:  Lluis Quintana-Murci; Christine Harmant; Hélène Quach; Oleg Balanovsky; Valery Zaporozhchenko; Connie Bormans; Paul D van Helden; Eileen G Hoal; Doron M Behar
Journal:  Am J Hum Genet       Date:  2010-03-25       Impact factor: 11.025

3.  Maternal traces of deep common ancestry and asymmetric gene flow between Pygmy hunter-gatherers and Bantu-speaking farmers.

Authors:  Lluís Quintana-Murci; Hélène Quach; Christine Harmant; Francesca Luca; Blandine Massonnet; Etienne Patin; Lucas Sica; Patrick Mouguiama-Daouda; David Comas; Shay Tzur; Oleg Balanovsky; Kenneth K Kidd; Judith R Kidd; Lolke van der Veen; Jean-Marie Hombert; Antoine Gessain; Paul Verdu; Alain Froment; Serge Bahuchet; Evelyne Heyer; Jean Dausset; Antonio Salas; Doron M Behar
Journal:  Proc Natl Acad Sci U S A       Date:  2008-01-23       Impact factor: 11.205

4.  Earliest date for milk use in the Near East and southeastern Europe linked to cattle herding.

Authors:  Richard P Evershed; Sebastian Payne; Andrew G Sherratt; Mark S Copley; Jennifer Coolidge; Duska Urem-Kotsu; Kostas Kotsakis; Mehmet Ozdoğan; Aslý E Ozdoğan; Olivier Nieuwenhuyse; Peter M M G Akkermans; Douglass Bailey; Radian-Romus Andeescu; Stuart Campbell; Shahina Farid; Ian Hodder; Nurcan Yalman; Mihriban Ozbaşaran; Erhan Biçakci; Yossef Garfinkel; Thomas Levy; Margie M Burton
Journal:  Nature       Date:  2008-08-06       Impact factor: 49.962

5.  Archeology in the turkana district, kenya.

Authors:  L H Robbins
Journal:  Science       Date:  1972-04-28       Impact factor: 47.728

6.  Meta-analysis of genome-wide linkage studies for quantitative lipid traits in African Americans.

Authors:  Alka Malhotra; Hilary Coon; Mary F Feitosa; Wei-Dong Li; Kari E North; R Arlen Price; Claude Bouchard; Steven C Hunt; Johanna K Wolford
Journal:  Hum Mol Genet       Date:  2005-11-21       Impact factor: 6.150

7.  T-13910 DNA variant associated with lactase persistence interacts with Oct-1 and stimulates lactase promoter activity in vitro.

Authors:  Rikke H Lewinsky; Tine G K Jensen; Jette Møller; Allan Stensballe; Jørgen Olsen; Jesper T Troelsen
Journal:  Hum Mol Genet       Date:  2005-11-21       Impact factor: 6.150

Review 8.  Positive natural selection in the human lineage.

Authors:  P C Sabeti; S F Schaffner; B Fry; J Lohmueller; P Varilly; O Shamovsky; A Palma; T S Mikkelsen; D Altshuler; E S Lander
Journal:  Science       Date:  2006-06-16       Impact factor: 47.728

9.  mtDNA control-region sequence variation suggests multiple independent origins of an "Asian-specific" 9-bp deletion in sub-Saharan Africans.

Authors:  H Soodyall; L Vigilant; A V Hill; M Stoneking; T Jenkins
Journal:  Am J Hum Genet       Date:  1996-03       Impact factor: 11.025

10.  Genetic and fossil evidence for the origin of modern humans.

Authors:  C B Stringer; P Andrews
Journal:  Science       Date:  1988-03-11       Impact factor: 47.728

View more
  34 in total

1.  Genetic diversity of disease-associated loci in Turkish population.

Authors:  Sefayet Karaca; Tomris Cesuroglu; Mehmet Karaca; Sema Erge; Renato Polimanti
Journal:  J Hum Genet       Date:  2015-02-26       Impact factor: 3.172

Review 2.  Demographic events and evolutionary forces shaping European genetic diversity.

Authors:  Krishna R Veeramah; John Novembre
Journal:  Cold Spring Harb Perspect Biol       Date:  2014-07-24       Impact factor: 10.005

3.  Full-length nucleotide sequences of 30 common SLC44A2 alleles encoding human neutrophil antigen-3.

Authors:  Qing Chen; Kshitij Srivastava; Stefanie C Ardinski; Kevin Lam; Michael J Huvard; Pirmin Schmid; Willy A Flegel
Journal:  Transfusion       Date:  2015-10-05       Impact factor: 3.157

Review 4.  African genetic diversity provides novel insights into evolutionary history and local adaptations.

Authors:  Ananyo Choudhury; Shaun Aron; Dhriti Sengupta; Scott Hazelhurst; Michèle Ramsay
Journal:  Hum Mol Genet       Date:  2018-08-01       Impact factor: 6.150

5.  EPHA2 sequence variants are associated with susceptibility to Kaposi's sarcoma-associated herpesvirus infection and Kaposi's sarcoma prevalence in HIV-infected patients.

Authors:  Melissa J Blumenthal; Charlotte Schutz; Graeme Meintjes; Zainab Mohamed; Marc Mendelson; Jon M Ambler; Denise Whitby; Romel D Mackelprang; Sinead Carse; Arieh A Katz; Georgia Schäfer
Journal:  Cancer Epidemiol       Date:  2018-08-31       Impact factor: 2.984

Review 6.  The peopling of the African continent and the diaspora into the new world.

Authors:  Michael C Campbell; Jibril B Hirbo; Jeffrey P Townsend; Sarah A Tishkoff
Journal:  Curr Opin Genet Dev       Date:  2014-12       Impact factor: 5.578

7.  CDKN2A Germline Rare Coding Variants and Risk of Pancreatic Cancer in Minority Populations.

Authors:  Robert R McWilliams; Eric D Wieben; Kari G Chaffee; Samuel O Antwi; Leon Raskin; Olufunmilayo I Olopade; Donghui Li; W Edward Highsmith; Gerardo Colon-Otero; Lauren G Khanna; Jennifer B Permuth; Janet E Olson; Harold Frucht; Jeanine Genkinger; Wei Zheng; William J Blot; Lang Wu; Luciana L Almada; Martin E Fernandez-Zapico; Hugues Sicotte; Katrina S Pedersen; Gloria M Petersen
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2018-07-23       Impact factor: 4.254

Review 8.  Perspectives on Human Variation through the Lens of Diversity and Race.

Authors:  Aravinda Chakravarti
Journal:  Cold Spring Harb Perspect Biol       Date:  2015-09-01       Impact factor: 10.005

9.  Spatially varying selection shapes life history clines among populations of Drosophila melanogaster from sub-Saharan Africa.

Authors:  D K Fabian; J B Lack; V Mathur; C Schlötterer; P S Schmidt; J E Pool; T Flatt
Journal:  J Evol Biol       Date:  2015-03-13       Impact factor: 2.411

Review 10.  Neurogenomics in Africa: Perspectives, progress, possibilities and priorities.

Authors:  Rufus O Akinyemi; Mayowa O Owolabi; Tolulope Oyeniyi; Bruce Ovbiagele; Donna K Arnett; Hemant K Tiwari; Richard Walker; Adesola Ogunniyi; Raj N Kalaria
Journal:  J Neurol Sci       Date:  2016-05-06       Impact factor: 3.181

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.