Literature DB >> 24979784

Single-residue insertion switches the quaternary structure and exciton states of cryptophyte light-harvesting proteins.

Stephen J Harrop1, Krystyna E Wilk1, Rayomond Dinshaw2, Elisabetta Collini3, Tihana Mirkovic2, Chang Ying Teng4, Daniel G Oblinsky2, Beverley R Green4, Kerstin Hoef-Emden5, Roger G Hiller6, Gregory D Scholes2, Paul M G Curmi7.   

Abstract

Observation of coherent oscillations in the 2D electronic spectra (2D ES) of photosynthetic proteins has led researchers to ask whether nontrivial quantum phenomena are biologically significant. Coherent oscillations have been reported for the soluble light-harvesting phycobiliprotein (PBP) antenna isolated from cryptophyte algae. To probe the link between spectral properties and protein structure, we determined crystal structures of three PBP light-harvesting complexes isolated from different species. Each PBP is a dimer of αβ subunits in which the structure of the αβ monomer is conserved. However, we discovered two dramatically distinct quaternary conformations, one of which is specific to the genus Hemiselmis. Because of steric effects emerging from the insertion of a single amino acid, the two αβ monomers are rotated by ∼73° to an "open" configuration in contrast to the "closed" configuration of other cryptophyte PBPs. This structural change is significant for the light-harvesting function because it disrupts the strong excitonic coupling between two central chromophores in the closed form. The 2D ES show marked cross-peak oscillations assigned to electronic and vibrational coherences in the closed-form PC645. However, such features appear to be reduced, or perhaps absent, in the open structures. Thus cryptophytes have evolved a structural switch controlled by an amino acid insertion to modulate excitonic interactions and therefore the mechanisms used for light harvesting.

Entities:  

Keywords:  X-ray crystallography; excitonic switching; protein evolution; quantum coherence

Mesh:

Substances:

Year:  2014        PMID: 24979784      PMCID: PMC4084447          DOI: 10.1073/pnas.1402538111

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  28 in total

1.  Studies of marine planktonic diatoms. I. Cyclotella nana Hustedt, and Detonula confervacea (cleve) Gran.

Authors:  R R GUILLARD; J H RYTHER
Journal:  Can J Microbiol       Date:  1962-04       Impact factor: 2.419

2.  Quantitative investigations of quantum coherence for a light-harvesting protein at conditions simulating photosynthesis.

Authors:  Daniel B Turner; Rayomond Dinshaw; Kyung-Koo Lee; Michael S Belsley; Krystyna E Wilk; Paul M G Curmi; Gregory D Scholes
Journal:  Phys Chem Chem Phys       Date:  2012-02-29       Impact factor: 3.676

3.  Long-lived quantum coherence in photosynthetic complexes at physiological temperature.

Authors:  Gitt Panitchayangkoon; Dugan Hayes; Kelly A Fransted; Justin R Caram; Elad Harel; Jianzhong Wen; Robert E Blankenship; Gregory S Engel
Journal:  Proc Natl Acad Sci U S A       Date:  2010-07-06       Impact factor: 11.205

Review 4.  Characterization, structure and function of linker polypeptides in phycobilisomes of cyanobacteria and red algae: an overview.

Authors:  Lu-Ning Liu; Xiu-Lan Chen; Yu-Zhong Zhang; Bai-Cheng Zhou
Journal:  Biochim Biophys Acta       Date:  2005-06-30

5.  How solvent controls electronic energy transfer and light harvesting.

Authors:  Gregory D Scholes; Carles Curutchet; Benedetta Mennucci; Roberto Cammi; Jacopo Tomasi
Journal:  J Phys Chem B       Date:  2007-06-06       Impact factor: 2.991

6.  Simultaneous amplification of 5' and 3' cDNA ends based on template-switching effect and inverse PCR.

Authors:  Jun-Chao Huang; Feng Chen
Journal:  Biotechniques       Date:  2006-02       Impact factor: 1.993

7.  Evidence for wavelike energy transfer through quantum coherence in photosynthetic systems.

Authors:  Gregory S Engel; Tessa R Calhoun; Elizabeth L Read; Tae-Kyu Ahn; Tomás Mancal; Yuan-Chung Cheng; Robert E Blankenship; Graham R Fleming
Journal:  Nature       Date:  2007-04-12       Impact factor: 49.962

8.  X-ray crystallographic structure of the light-harvesting biliprotein C-phycocyanin from the thermophilic cyanobacterium Mastigocladus laminosus and its resemblance to globin structures.

Authors:  T Schirmer; W Bode; R Huber; W Sidler; H Zuber
Journal:  J Mol Biol       Date:  1985-07-20       Impact factor: 5.469

9.  Phycobilins of cryptophycean algae. Novel linkage of dihydrobiliverdin in a phycoerythrin 555 and a phycocyanin 645.

Authors:  D E Wemmer; G J Wedemayer; A N Glazer
Journal:  J Biol Chem       Date:  1993-01-25       Impact factor: 5.157

10.  Phaser crystallographic software.

Authors:  Airlie J McCoy; Ralf W Grosse-Kunstleve; Paul D Adams; Martyn D Winn; Laurent C Storoni; Randy J Read
Journal:  J Appl Crystallogr       Date:  2007-07-13       Impact factor: 3.304

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  9 in total

1.  Diversification of light capture ability was accompanied by the evolution of phycobiliproteins in cryptophyte algae.

Authors:  Matthew J Greenwold; Brady R Cunningham; Eric M Lachenmyer; John Michael Pullman; Tammi L Richardson; Jeffry L Dudycha
Journal:  Proc Biol Sci       Date:  2019-05-15       Impact factor: 5.349

Review 2.  Coherent phenomena in photosynthetic light harvesting: part two-observations in biological systems.

Authors:  Harry W Rathbone; Jeffery A Davis; Katharine A Michie; Sophia C Goodchild; Neil O Robertson; Paul M G Curmi
Journal:  Biophys Rev       Date:  2018-09-22

3.  Possible role of interference, protein noise, and sink effects in nonphotochemical quenching in photosynthetic complexes.

Authors:  Gennady P Berman; Alexander I Nesterov; Shmuel Gurvitz; Richard T Sayre
Journal:  J Math Biol       Date:  2016-04-30       Impact factor: 2.259

4.  A far-red cyanobacteriochrome lineage specific for verdins.

Authors:  Marcus V Moreno; Nathan C Rockwell; Manuel Mora; Andrew J Fisher; J Clark Lagarias
Journal:  Proc Natl Acad Sci U S A       Date:  2020-10-26       Impact factor: 11.205

5.  Photosynthesis tunes quantum-mechanical mixing of electronic and vibrational states to steer exciton energy transfer.

Authors:  Jacob S Higgins; Lawson T Lloyd; Sara H Sohail; Marco A Allodi; John P Otto; Rafael G Saer; Ryan E Wood; Sara C Massey; Po-Chieh Ting; Robert E Blankenship; Gregory S Engel
Journal:  Proc Natl Acad Sci U S A       Date:  2021-03-16       Impact factor: 12.779

6.  Proteomic analysis of the phycobiliprotein antenna of the cryptophyte alga Guillardia theta cultured under different light intensities.

Authors:  Thomas Kieselbach; Otilia Cheregi; Beverley R Green; Christiane Funk
Journal:  Photosynth Res       Date:  2017-05-24       Impact factor: 3.573

7.  Controllable Phycobilin Modification: An Alternative Photoacclimation Response in Cryptophyte Algae.

Authors:  Leah C Spangler; Mina Yu; Philip D Jeffrey; Gregory D Scholes
Journal:  ACS Cent Sci       Date:  2022-02-09       Impact factor: 14.553

8.  Presence of state transitions in the cryptophyte alga Guillardia theta.

Authors:  Otilia Cheregi; Eva Kotabová; Ondřej Prášil; Wolfgang P Schröder; Radek Kaňa; Christiane Funk
Journal:  J Exp Bot       Date:  2015-08-06       Impact factor: 6.992

Review 9.  Understanding the fabric of protein crystals: computational classification of biological interfaces and crystal contacts.

Authors:  Guido Capitani; Jose M Duarte; Kumaran Baskaran; Spencer Bliven; Joseph C Somody
Journal:  Bioinformatics       Date:  2015-10-27       Impact factor: 6.937

  9 in total

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