| Literature DB >> 24978811 |
Derek C Johnson1, Madhav P Bhatta2, Jennifer S Smith3, Mirjam-Colette Kempf4, Thomas R Broker5, Sten H Vermund6, Eric Chamot1, Shilu Aryal7, Pema Lhaki8, Sadeep Shrestha1.
Abstract
INTRODUCTION: Nepal has one of the highest cervical cancer rates in South Asia. Only a few studies in populations from urban areas have investigated type specific distribution of human papillomavirus (HPV) in Nepali women. Data on high-risk HPV (HR-HPV) types are not currently available for rural populations in Nepal. We aimed to assess the distribution of HR- HPV among rural Nepali women while assessing self-collected and clinician-collected cervico-vaginal specimens as sample collection methods for HPV screening.Entities:
Mesh:
Substances:
Year: 2014 PMID: 24978811 PMCID: PMC4076302 DOI: 10.1371/journal.pone.0101255
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Figure 1Study Sample Size Algorithm according to Strengthening the Reporting of Observational Studies in Epidemiology (STROBE) Guidelines.
Socio-demographic and Behavioral Characteristics, and Human Papillomavirus (HPV) mRNA Results in Women Participating in a Health Camp in Achham District of the Far western Nepal.
| Characteristics | Mean (SD), median (IQR) or Frequency (%) |
|
| |
| Self-Collected Sample | 20 (7.7) |
| Clinician-Collected Sample | 17 (6.5) |
| Either Sample | 25 (9.6) |
|
| |
| Mean (SD) | 33.8 (8.8) |
| Median (IQR) | 33 (26–40) |
|
| |
| Mean (SD) | 17.3 (2.6) |
| Median (IQR) | 17.5 (15–19) |
|
| |
| Mean (SD) | 3.2 (1.6) |
| Median (IQR) | 3.0 (2.0–4.0) |
|
| |
| Yes | 121 (50.4) |
| No | 119 (49.6) |
|
| |
| Yes | 143 (58.1) |
| No | 103 (41.9) |
|
| |
| Yes | 36 (16.1) |
| No | 187 (83.9) |
|
| |
| Yes | 132 (56.4) |
| No | 102 (43.6) |
SD = Standard Deviation; IQR = Inter-quartile range.
*High Risk HPV (HR-HPV) defined as testing positive for one of the following genotypes: (16, 18, 31, 33, 35, 39, 45, 51, 52, 56, 58, 59, 66, and 68).
**Tested positive for HR-HPV in either clinician- or self-collected biospecimen.
Prevalence and Concordance of High Risk-Human Papillomavirus (HR-HPV) Test Results Between Clinician-collected and Self-collected Cervico-vaginal Samples at a Health Camp in Achham District, Nepal in 261 women.
| Prevalence | Concordance | ||||
| Clinician-collected sample (95% CI) | Self-collectedsample (95%_CI) | % Negative agreement (95%CI) | % Positive agreement (95%CI) | Kappa (95%CI) | |
|
| 7.7 (4.4–10.9) | 6.5 (4.1–10.2) | 94.7 (93.3–96.2) | 48.0 (30.1–65.9) | 0.62 (0.43–0.81) |
|
| 1.9 (0.9–3.5) | 1.9 (0.9–3.5) | 100.0 (100.0–100.0) | 100.0 (100.0–100.0) | 1.00 (1.0–1.0) |
|
| 5.8 (3.0–9.1) | 4.6 (2.7–7.9) | 94.9 (93.5–96.3) | 35.0 (12.1–57.9) | 0.49 (0.26–0.73) |
|
| 87.5 (46.7–99.3) | 75.0 (35.6–95.5) | N/A | N/A | N/A |
95% CI = 95% Confidence Interval;
*High-Risk HPV (HR-HPV) defined as testing positive for one of the following genotypes: (16, 18, 31, 33, 35, 39, 45, 51, 52, 56, 58, 59, 66, 68);
**HSIL = High-grade Squamous Intraepithelial Lesion; SCC = Squamous Cell Carcinoma.
High-risk Human Papillomavirus (HR-HPV) Test* Results on Clinician-collected or Self-collected Cervico-vaginal Specimens Stratified by Liquid-based Cytology, Achham District, Nepal (N = 278).
| Liquid-based Cytology | |||||||||
| SCC | HSIL | ASC-H | LSIL | AGUS | ASCUS | UNSAT | WNL/BCC/ACTINO | Total | |
|
| 1 | 7 | 5 | 4 | 2 | 32 | 16 | 211 | 278 |
|
| 1 | 6 | 1 | 3 | 0 | 2 | 1 | 6 | 20 |
| Type 16/18/45 | 1 | 3 | 0 | 0 | 0 | 0 | 0 | 2 | 6 |
| Other HR-HPV | 0 | 3 | 1 | 3 | 0 | 2 | 1 | 4 | 14 |
|
| 1 | 5 | 0 | 2 | 0 | 3 | 1 | 5 | 17 |
| Type 16/18/45 | 1 | 3 | 0 | 0 | 0 | 0 | 0 | 2 | 5 |
| Other HR-HPV | 0 | 2 | 0 | 2 | 0 | 3 | 1 | 3 | 12 |
*APTIMA HR-HPV mRNA Assay (Hologic/Gen-Probe, San Diego, CA).
**ThinPrep PreservCyt medium ((Hologic/Gen-Probe, San Diego, CA).
SCC = Squamous Cell Carcinoma; HSIL = High-grade Squamous Intraepithelial Lesion; ASC-H = Atypical Squamous Cell-cannot exclude HSIL; AGUS = Atypical Glandular Cells of Undetermined Significance; LSIL = Low-grade Squamous Intraepithelial Lesion; ASCUS = Atypical Squamous Cells of Undetermined Significance; UNSAT = Unsatisfactory; WNL = Within Normal Limits; BCC = benign cellular changes; ACTINO = Actinomycosis.