Literature DB >> 24975945

Effects of long-term averaging of quantitative blood pressure traits on the detection of genetic associations.

Santhi K Ganesh1, Daniel I Chasman2, Martin G Larson3, Xiuqing Guo4, Germain Verwoert5, Joshua C Bis6, Xiangjun Gu7, Albert V Smith8, Min-Lee Yang9, Yan Zhang10, Georg Ehret11, Lynda M Rose12, Shih-Jen Hwang13, George J Papanicolau14, Eric J Sijbrands15, Kenneth Rice16, Gudny Eiriksdottir17, Vasyl Pihur18, Paul M Ridker2, Ramachandran S Vasan19, Christopher Newton-Cheh20, Leslie J Raffel21, Najaf Amin22, Jerome I Rotter4, Kiang Liu23, Lenore J Launer24, Ming Xu25, Mark Caulfield26, Alanna C Morrison27, Andrew D Johnson28, Dhananjay Vaidya29, Abbas Dehghan22, Guo Li6, Claude Bouchard30, Tamara B Harris24, He Zhang9, Eric Boerwinkle27, David S Siscovick31, Wei Gao25, Andre G Uitterlinden32, Fernando Rivadeneira5, Albert Hofman22, Cristen J Willer9, Oscar H Franco22, Yong Huo10, Jacqueline C M Witteman22, Patricia B Munroe26, Vilmundur Gudnason8, Walter Palmas33, Cornelia van Duijn34, Myriam Fornage35, Daniel Levy36, Bruce M Psaty37, Aravinda Chakravarti38.   

Abstract

Blood pressure (BP) is a heritable, quantitative trait with intraindividual variability and susceptibility to measurement error. Genetic studies of BP generally use single-visit measurements and thus cannot remove variability occurring over months or years. We leveraged the idea that averaging BP measured across time would improve phenotypic accuracy and thereby increase statistical power to detect genetic associations. We studied systolic BP (SBP), diastolic BP (DBP), mean arterial pressure (MAP), and pulse pressure (PP) averaged over multiple years in 46,629 individuals of European ancestry. We identified 39 trait-variant associations across 19 independent loci (p < 5 × 10(-8)); five associations (in four loci) uniquely identified by our LTA analyses included those of SBP and MAP at 2p23 (rs1275988, near KCNK3), DBP at 2q11.2 (rs7599598, in FER1L5), and PP at 6p21 (rs10948071, near CRIP3) and 7p13 (rs2949837, near IGFBP3). Replication analyses conducted in cohorts with single-visit BP data showed positive replication of associations and a nominal association (p < 0.05). We estimated a 20% gain in statistical power with long-term average (LTA) as compared to single-visit BP association studies. Using LTA analysis, we identified genetic loci influencing BP. LTA might be one way of increasing the power of genetic associations for continuous traits in extant samples for other phenotypes that are measured serially over time.
Copyright © 2014 The American Society of Human Genetics. Published by Elsevier Inc. All rights reserved.

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Year:  2014        PMID: 24975945      PMCID: PMC4085637          DOI: 10.1016/j.ajhg.2014.06.002

Source DB:  PubMed          Journal:  Am J Hum Genet        ISSN: 0002-9297            Impact factor:   11.025


  91 in total

1.  Expression of the kcnk3 potassium channel gene lessens the injury from cerebral ischemia, most likely by a general influence on blood pressure.

Authors:  S Muhammad; M I Aller; C Maser-Gluth; M Schwaninger; W Wisden
Journal:  Neuroscience       Date:  2010-02-16       Impact factor: 3.590

2.  The 5p12 breast cancer susceptibility locus affects MRPS30 expression in estrogen-receptor positive tumors.

Authors:  David A Quigley; Elisa Fiorito; Silje Nord; Peter Van Loo; Grethe Grenaker Alnæs; Thomas Fleischer; Jorg Tost; Hans Kristian Moen Vollan; Trine Tramm; Jens Overgaard; Ida R Bukholm; Antoni Hurtado; Allan Balmain; Anne-Lise Børresen-Dale; Vessela Kristensen
Journal:  Mol Oncol       Date:  2013-12-03       Impact factor: 6.603

3.  Assessing the validity of childhood blood pressure screening: unbiased estimates of sensitivity, specificity, and predictive values.

Authors:  M W Gillman; N R Cook; B Rosner; D A Evans; M E Keough; J O Taylor; C H Hennekens
Journal:  Epidemiology       Date:  1992-01       Impact factor: 4.822

4.  Circulating insulin-like growth factor-1 and its binding protein-3: metabolic and genetic correlates in the community.

Authors:  Carolyn S P Lam; Ming-Huei Chen; Sean M Lacey; Qiong Yang; Lisa M Sullivan; Vanessa Xanthakis; Radwan Safa; Holly M Smith; Xuyang Peng; Douglas B Sawyer; Ramachandran S Vasan
Journal:  Arterioscler Thromb Vasc Biol       Date:  2010-04-08       Impact factor: 8.311

5.  Genetics of gene expression and its effect on disease.

Authors:  Valur Emilsson; Gudmar Thorleifsson; Bin Zhang; Amy S Leonardson; Florian Zink; Jun Zhu; Sonia Carlson; Agnar Helgason; G Bragi Walters; Steinunn Gunnarsdottir; Magali Mouy; Valgerdur Steinthorsdottir; Gudrun H Eiriksdottir; Gyda Bjornsdottir; Inga Reynisdottir; Daniel Gudbjartsson; Anna Helgadottir; Aslaug Jonasdottir; Adalbjorg Jonasdottir; Unnur Styrkarsdottir; Solveig Gretarsdottir; Kristinn P Magnusson; Hreinn Stefansson; Ragnheidur Fossdal; Kristleifur Kristjansson; Hjortur G Gislason; Tryggvi Stefansson; Bjorn G Leifsson; Unnur Thorsteinsdottir; John R Lamb; Jeffrey R Gulcher; Marc L Reitman; Augustine Kong; Eric E Schadt; Kari Stefansson
Journal:  Nature       Date:  2008-03-16       Impact factor: 49.962

6.  Cohorts for Heart and Aging Research in Genomic Epidemiology (CHARGE) Consortium: Design of prospective meta-analyses of genome-wide association studies from 5 cohorts.

Authors:  Bruce M Psaty; Christopher J O'Donnell; Vilmundur Gudnason; Kathryn L Lunetta; Aaron R Folsom; Jerome I Rotter; André G Uitterlinden; Tamara B Harris; Jacqueline C M Witteman; Eric Boerwinkle
Journal:  Circ Cardiovasc Genet       Date:  2009-02

7.  A cross-platform analysis of 14,177 expression quantitative trait loci derived from lymphoblastoid cell lines.

Authors:  Liming Liang; Nilesh Morar; Anna L Dixon; G Mark Lathrop; Goncalo R Abecasis; Miriam F Moffatt; William O C Cookson
Journal:  Genome Res       Date:  2013-01-23       Impact factor: 9.043

8.  MicroRNA expression in abdominal and gluteal adipose tissue is associated with mRNA expression levels and partly genetically driven.

Authors:  Mattias Rantalainen; Blanca M Herrera; George Nicholson; Rory Bowden; Quin F Wills; Josine L Min; Matt J Neville; Amy Barrett; Maxine Allen; Nigel W Rayner; Jan Fleckner; Mark I McCarthy; Krina T Zondervan; Fredrik Karpe; Chris C Holmes; Cecilia M Lindgren
Journal:  PLoS One       Date:  2011-11-15       Impact factor: 3.240

9.  Tissue-specific genetic control of splicing: implications for the study of complex traits.

Authors:  Erin L Heinzen; Dongliang Ge; Kenneth D Cronin; Jessica M Maia; Kevin V Shianna; Willow N Gabriel; Kathleen A Welsh-Bohmer; Christine M Hulette; Thomas N Denny; David B Goldstein
Journal:  PLoS Biol       Date:  2008-12-23       Impact factor: 8.029

10.  Geographical genomics of human leukocyte gene expression variation in southern Morocco.

Authors:  Youssef Idaghdour; Wendy Czika; Kevin V Shianna; Sang H Lee; Peter M Visscher; Hilary C Martin; Kelci Miclaus; Sami J Jadallah; David B Goldstein; Russell D Wolfinger; Greg Gibson
Journal:  Nat Genet       Date:  2009-12-06       Impact factor: 38.330

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  36 in total

1.  Functional TASK-3-Like Channels in Mitochondria of Aldosterone-Producing Zona Glomerulosa Cells.

Authors:  Junlan Yao; David McHedlishvili; William E McIntire; Nick A Guagliardo; Alev Erisir; Craig A Coburn; Vincent P Santarelli; Douglas A Bayliss; Paula Q Barrett
Journal:  Hypertension       Date:  2017-06-19       Impact factor: 10.190

Review 2.  Personalized Therapy of Hypertension: the Past and the Future.

Authors:  Paolo Manunta; Mara Ferrandi; Daniele Cusi; Patrizia Ferrari; Jan Staessen; Giuseppe Bianchi
Journal:  Curr Hypertens Rep       Date:  2016-03       Impact factor: 5.369

3.  Meta-analysis of correlated traits via summary statistics from GWASs with an application in hypertension.

Authors:  Xiaofeng Zhu; Tao Feng; Bamidele O Tayo; Jingjing Liang; J Hunter Young; Nora Franceschini; Jennifer A Smith; Lisa R Yanek; Yan V Sun; Todd L Edwards; Wei Chen; Mike Nalls; Ervin Fox; Michele Sale; Erwin Bottinger; Charles Rotimi; Yongmei Liu; Barbara McKnight; Kiang Liu; Donna K Arnett; Aravinda Chakravati; Richard S Cooper; Susan Redline
Journal:  Am J Hum Genet       Date:  2014-12-11       Impact factor: 11.025

Review 4.  Over 1000 genetic loci influencing blood pressure with multiple systems and tissues implicated.

Authors:  Claudia P Cabrera; Fu Liang Ng; Hannah L Nicholls; Ajay Gupta; Michael R Barnes; Patricia B Munroe; Mark J Caulfield
Journal:  Hum Mol Genet       Date:  2019-11-21       Impact factor: 6.150

5.  Loss of reticulocalbin 2 lowers blood pressure and restrains ANG II-induced hypertension in vivo.

Authors:  Jing Li; Sylvia Cechova; Lina Wang; Brant E Isakson; Thu H Le; Weibin Shi
Journal:  Am J Physiol Renal Physiol       Date:  2019-04-03

6.  Fast Principal-Component Analysis Reveals Convergent Evolution of ADH1B in Europe and East Asia.

Authors:  Kevin J Galinsky; Gaurav Bhatia; Po-Ru Loh; Stoyan Georgiev; Sayan Mukherjee; Nick J Patterson; Alkes L Price
Journal:  Am J Hum Genet       Date:  2016-02-25       Impact factor: 11.025

7.  Optimizing Genetic Analyses of Serum Lipids in Longitudinal Data.

Authors:  Hung-Hsin Chen; Lauren E Petty; Eric R Gamazon; Quinn S Wells; Jennifer E Below
Journal:  Circ Res       Date:  2020-09-02       Impact factor: 17.367

8.  The role of rare variants in systolic blood pressure: analysis of ExomeChip data in HyperGEN African Americans.

Authors:  Yun Ju Sung; Jacob Basson; Nuo Cheng; Khanh-Dung H Nguyen; Priyanka Nandakumar; Steven C Hunt; Donna K Arnett; Victor G Dávila-Román; Dabeeru C Rao; Aravinda Chakravarti
Journal:  Hum Hered       Date:  2015       Impact factor: 0.444

9.  Resistant Hypertension: Detection, Evaluation, and Management: A Scientific Statement From the American Heart Association.

Authors:  Robert M Carey; David A Calhoun; George L Bakris; Robert D Brook; Stacie L Daugherty; Cheryl R Dennison-Himmelfarb; Brent M Egan; John M Flack; Samuel S Gidding; Eric Judd; Daniel T Lackland; Cheryl L Laffer; Christopher Newton-Cheh; Steven M Smith; Sandra J Taler; Stephen C Textor; Tanya N Turan; William B White
Journal:  Hypertension       Date:  2018-11       Impact factor: 10.190

10.  Rare Exome Sequence Variants in CLCN6 Reduce Blood Pressure Levels and Hypertension Risk.

Authors:  Bing Yu; Sara L Pulit; Shih-Jen Hwang; Jennifer A Brody; Najaf Amin; Paul L Auer; Joshua C Bis; Eric Boerwinkle; Gregory L Burke; Aravinda Chakravarti; Adolfo Correa; Albert W Dreisbach; Oscar H Franco; Georg B Ehret; Nora Franceschini; Albert Hofman; Dan-Yu Lin; Ginger A Metcalf; Solomon K Musani; Donna Muzny; Walter Palmas; Leslie Raffel; Alex Reiner; Ken Rice; Jerome I Rotter; Narayanan Veeraraghavan; Ervin Fox; Xiuqing Guo; Kari E North; Richard A Gibbs; Cornelia M van Duijn; Bruce M Psaty; Daniel Levy; Christopher Newton-Cheh; Alanna C Morrison
Journal:  Circ Cardiovasc Genet       Date:  2015-12-11
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