| Literature DB >> 24971577 |
Carol Lozano-Santos1, Jimena Martinez-Velasquez2, Belen Fernandez-Cuevas1, Natividad Polo1, Belen Navarro1, Isabel Millan3, Jose Miguel Garcia4, Rosa Collado5, Pedro Sanchez-Godoy6, Felix Carbonell5, Jose Antonio Garcia-Vela7, Jose Antonio Garcia-Marco1, Natalia Gomez-Lozano2.
Abstract
Vascular endothelial growth factor (VEGF)-mediated angiogenesis contributes to the pathogenesis of B-cell chronic lymphocytic leukaemia (CLL). We investigated the impact of VEGFA gene diversity on the clinical outcome of patients with this disease. A VEGFA haplotype conformed by positions rs699947 (-1540C>A), rs833061 (-460T>C) and rs2010963 (405C>G) and two additional single-nucleotide polymorphisms (SNPs), rs3025039 (936C>T) and rs25648 (1032C>T), were analysed in 239 patients at the time of their CLL diagnosis. Here, we showed that homozygosity for rs699947/rs833061/rs2010963 ACG haplotype (ACG+/+ genotype) correlated with a reduced survival in CLL patients (ACG+/+ vs other genotypes: HR = 2.3, p = 0.002; recessive model). In multivariate analysis, the ACG+/+ genotype was identified as a novel independent prognostic factor (HR = 2.1, p = 0.005). Moreover, ACG homozygosity subdivided patients with CLL with otherwise indolent parameters into prognostic subgroups with different outcomes. Specifically, patients carrying the ACG+/+ genotype with mutated IgVH, very low and low-risk cytogenetics, initial clinical stage, CD38 negative status or early age at diagnosis showed a shorter survival (ACG+/+ vs other genotypes: HR = 3.5, p = 0.035; HR = 3.4, p = 0.001; HR = 2.2, p = 0.035; HR = 3.4, p = 0.0001 and HR = 3.1, p = 0.009, respectively). In conclusion, VEGFA ACG+/+ genotype confers an adverse effect in overall survival in CLL patients with an indolent course of the disease. These observations support the biological and prognostic implications of VEGFA genetics in CLL.Entities:
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Year: 2014 PMID: 24971577 PMCID: PMC4074164 DOI: 10.1371/journal.pone.0101063
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Clinical and molecular characteristics of the CLL patients.
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| Gender | Male | 136 (56.9) |
| Female | 103 (43.1) | |
| Age | <65 | 116 (48.5) |
| >65 | 123 (51.5) | |
| Binet stage | A | 177 (74.1) |
| B | 51 (21.3) | |
| C | 11 (4.6) | |
| RAI stage | 0 | 116 (48.5) |
| I | 54 (22.6) | |
| II | 56 (23.4) | |
| III | 6 (2.5) | |
| IV | 7 (2.9) | |
| Treatment | Yes | 106 (44.4) |
| No | 132 (55.2) | |
| n.d. | 1 (0.4) | |
| Status | Dead | 81 (33.9) |
| Alive | 158 (66.1) | |
| Cause of death | Disease | 73 (76.8) |
| Other | 8 (8.4) | |
| Richter | Yes | 16 (6.7) |
| No | 223 (93.3) | |
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| Genetic lesions | ||
| Very low-risk (del13q) | 67 (28.0) | |
| Low-Risk (NC, +12) | 116 (48.5) | |
| Intermediate-risk (del11q) | 20 (8.4) | |
| High-risk (Δ | 36 (15.1) | |
| CD38 expression | Negative | 178 (74.5) |
| Positive | 32 (13.4) | |
| n.d. | 29 (12.1) | |
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| Negative | 60 (25.1) |
| Positive | 50 (20.9) | |
| n.d. | 129 (54.0) | |
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| M | 98 (41) |
| UM | 124 (51.9) | |
| n.d. | 17 (7.1) | |
NC: normal karyotype, n.d: not determined.
Minor allele frequencies (MAF) of the VEGF polymorphisms studied in CLL patients.
| Locus | Alleles | Frequencies |
| rs699947 | C:A | 0.45 |
| rs833061 | T:C | 0.46 |
| rs2010963 | G:C | 0.35 |
| rs25648 | C:T | 0.15 |
| rs3025039 | C:T | 0.13 |
Figure 1Association of VEGFA genotypes and OS of 239 CLL patients.
Kaplan-Maier curves according to: (A) a recessive comparison of rs699947/rs833061/rs2010963 ACG+/+ genotype and, (B) number of copies of ACG haplotype.
Multivariate analysis of the associations between VEGFArs699947/rs833061/rs2010963 genotypes and OS of CLL patients.
| Variable | Comparison | HR (95% CI) | p-value |
| Age at diagnosis | >65 vs <65 | 2.7 (1.7–4.4) | 7×10−5 |
| Binet stage | B+C vs A | 2.0 (1.2–3.4) | 0.01 |
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| Yes vs No | 3.8 (2.3–6.5) | 5×10−7 |
| del11q | Yes vs No | 1.9 (1.0–3.5) | 0.051 |
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| UM vs M | 2.3 (1.3–4.3) | 0.01 |
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Patients aged 65 year have been classified >65.
Haplotype rs699947/rs833061/rs2010963.
HR: hazard ratio, Pos: positive, Neg: negative.
Distribution of VEGF genotypes in B-CLL groups with different mutational status of theIgV genes.
| Variant | Genotypes | M % (n) (N = 98) | UM %(n) (N = 124) | OR (95% IC) | p-value |
| haplotype ACG | X/X | 35.7 (35) | 29.0 (36) | 1 | |
| ACG/X | 52.0 (51) | 45.2 (56) | 1.1 (0.6–2.0) | 0.83 | |
| ACG/ACG | 12.2 (12) | 25.8 (32) |
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| rs25648 | C/C | 72.4 (71) | 70.2 (87) | 1 | |
| C/T | 26.5 (26) | 29.0 (36) | 0.9 (0.5–1.6) | 0.69 | |
| T/T | 1.0 (1) | 0.8 (1) | 0.9 (0.5–1.6) | 0.70 | |
| rs3025039 | C/C | 68.4 (67) | 78.2 (97) | 1 | |
| C/T | 31.6 (31) | 20.0 (26) | 1.7 (0.9–3.2) | 0.08 | |
| T/T | 0 | 0.8 (1) | 1.7 (0.9–3) | 0.1 | |
M: patients with mutated IgV genes, UM: patients with unmutatedIgV genes.
OR: odds ratio; CI, confidence interval.
Haplotype rs699947/rs833061/rs2010963. X genotype corresponds to n haplotypes other than ACG (CTC or CTG).
The upper homozygous genotype of each variant is designated the reference with an arbitrary OR value of 1 upon which the OR of the other genotypes are based.
Significant risk factors are shown in bold.
Figure 2Association of VEGFA ACG+/+ genotype and OS of CLL patients with good prognostic features.
Kaplan-Maier curves according to VEGFA ACG+/+ genotype (solid line) and other genotypes (dotted line) in subgroups of patients divided by (A) age at diagnosis, (B) IgVH mutational status, (C) Binet stage, (D) CD38 status and, (E) genetic abnormalities. aVery low (del13q), low (normal karyotype), intermediate (ΔATM) and high-risk (ΔTP53).