Literature DB >> 24968072

Toward development of a comprehensive external quality assurance program for polyfunctional intracellular cytokine staining assays.

Janet S Staats1, Jennifer H Enzor2, Ana M Sanchez3, Wes Rountree3, Cliburn Chan4, Maria Jaimes5, Ray Chun-Fai Chan6, Amitabh Gaur6, Thomas N Denny3, Kent J Weinhold2.   

Abstract

The External Quality Assurance Program Oversight Laboratory (EQAPOL) Flow Cytometry Program assesses the proficiency of NIH/NIAID/DAIDS-supported and potentially other interested research laboratories in performing Intracellular Cytokine Staining (ICS) assays. The goal of the EQAPOL Flow Cytometry External Quality Assurance Program (EQAP) is to provide proficiency testing and remediation for participating sites. The program is not punitive; rather, EQAPOL aims to help sites identify areas for improvement. EQAPOL utilizes a highly standardized ICS assay to minimize variability and readily identify those sites experiencing technical difficulties with their assays. Here, we report the results of External Proficiency 3 (EP3) where participating sites performed a 7-color ICS assay. On average, sites perform well in the Flow Cytometry EQAP (median score is "Good"). The most common technical issues identified by the program involve protocol adherence and data analysis; these areas have been the focus of site remediation. The EQAPOL Flow Cytometry team is now in the process of expanding the program to 8-color ICS assays. Evaluating polyfunctional ICS responses would align the program with assays currently being performed in support of HIV immune monitoring assays.
Copyright © 2014 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Antigen specific; Flow cytometry; Grading; ICS; Proficiency testing; Site performance

Mesh:

Substances:

Year:  2014        PMID: 24968072      PMCID: PMC4138230          DOI: 10.1016/j.jim.2014.05.021

Source DB:  PubMed          Journal:  J Immunol Methods        ISSN: 0022-1759            Impact factor:   2.303


  19 in total

1.  Analyses of quality assessment studies using CD45 for gating lymphocytes for CD3(+)4(+)%.

Authors:  R Gelman; C Wilkening
Journal:  Cytometry       Date:  2000-02-15

2.  Sensitive and viable identification of antigen-specific CD8+ T cells by a flow cytometric assay for degranulation.

Authors:  Michael R Betts; Jason M Brenchley; David A Price; Stephen C De Rosa; Daniel C Douek; Mario Roederer; Richard A Koup
Journal:  J Immunol Methods       Date:  2003-10-01       Impact factor: 2.303

3.  Detection of T-cell degranulation: CD107a and b.

Authors:  Michael R Betts; Richard A Koup
Journal:  Methods Cell Biol       Date:  2004       Impact factor: 1.441

Review 4.  Polyfunctional analysis of human t cell responses: importance in vaccine immunogenicity and natural infection.

Authors:  George Makedonas; Michael R Betts
Journal:  Springer Semin Immunopathol       Date:  2006-08-25

5.  Intracellular cytokine optimization and standard operating procedure.

Authors:  Laurie Lamoreaux; Mario Roederer; Richard Koup
Journal:  Nat Protoc       Date:  2006       Impact factor: 13.491

6.  Evaluating fluorescence sensitivity on flow cytometers: an overview.

Authors:  J C Wood; R A Hoffman
Journal:  Cytometry       Date:  1998-10-01

7.  Leukopak PBMC sample processing for preparing quality control material to support proficiency testing programs.

Authors:  Ambrosia Garcia; Sarah Keinonen; Ana M Sanchez; Guido Ferrari; Thomas N Denny; M Anthony Moody
Journal:  J Immunol Methods       Date:  2014-06-10       Impact factor: 2.303

8.  HIV nonprogressors preferentially maintain highly functional HIV-specific CD8+ T cells.

Authors:  Michael R Betts; Martha C Nason; Sadie M West; Stephen C De Rosa; Stephen A Migueles; Jonathan Abraham; Michael M Lederman; Jose M Benito; Paul A Goepfert; Mark Connors; Mario Roederer; Richard A Koup
Journal:  Blood       Date:  2006-02-07       Impact factor: 22.113

9.  Degradation of T cell receptor (TCR)-CD3-zeta complexes after antigenic stimulation.

Authors:  S Valitutti; S Müller; M Salio; A Lanzavecchia
Journal:  J Exp Med       Date:  1997-05-19       Impact factor: 14.307

10.  Standardization of cytokine flow cytometry assays.

Authors:  Holden T Maecker; Aline Rinfret; Patricia D'Souza; Janice Darden; Eva Roig; Claire Landry; Peter Hayes; Josephine Birungi; Omu Anzala; Miguel Garcia; Alexandre Harari; Ian Frank; Ruth Baydo; Megan Baker; Jennifer Holbrook; Janet Ottinger; Laurie Lamoreaux; C Lorrie Epling; Elizabeth Sinclair; Maria A Suni; Kara Punt; Sandra Calarota; Sophia El-Bahi; Gailet Alter; Hazel Maila; Ellen Kuta; Josephine Cox; Clive Gray; Marcus Altfeld; Nolwenn Nougarede; Jean Boyer; Lynda Tussey; Timothy Tobery; Barry Bredt; Mario Roederer; Richard Koup; Vernon C Maino; Kent Weinhold; Giuseppe Pantaleo; Jill Gilmour; Helen Horton; Rafick P Sekaly
Journal:  BMC Immunol       Date:  2005-06-24       Impact factor: 3.615

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  6 in total

Review 1.  Immune Monitoring for CMV in Transplantation.

Authors:  Michelle K Yong; Sharon R Lewin; Oriol Manuel
Journal:  Curr Infect Dis Rep       Date:  2018-03-14       Impact factor: 3.725

2.  Variability of the IFN-γ ELISpot assay in the context of proficiency testing and bridging studies.

Authors:  Wes Rountree; Mark Berrong; Ana M Sanchez; Thomas N Denny; Guido Ferrari
Journal:  J Immunol Methods       Date:  2016-03-25       Impact factor: 2.303

3.  Introduction to a Special Issue of the Journal of Immunological Methods: Building global resource programs to support HIV/AIDS clinical trial studies.

Authors:  Ana M Sanchez; Thomas N Denny; Maurice O'Gorman
Journal:  J Immunol Methods       Date:  2014-06-06       Impact factor: 2.303

4.  Managing Multi-center Flow Cytometry Data for Immune Monitoring.

Authors:  Scott White; Karoline Laske; Marij Jp Welters; Nicole Bidmon; Sjoerd H van der Burg; Cedrik M Britten; Jennifer Enzor; Janet Staats; Kent J Weinhold; Cécile Gouttefangeas; Cliburn Chan
Journal:  Cancer Inform       Date:  2015-06-10

5.  FlowKit: A Python Toolkit for Integrated Manual and Automated Cytometry Analysis Workflows.

Authors:  Scott White; John Quinn; Jennifer Enzor; Janet Staats; Sarah M Mosier; James Almarode; Thomas N Denny; Kent J Weinhold; Guido Ferrari; Cliburn Chan
Journal:  Front Immunol       Date:  2021-11-05       Impact factor: 7.561

Review 6.  A Cytometrist's Guide to Coordinating and Performing Effective COVID-19 Research.

Authors:  Pratip K Chattopadhyay; Andrew Filby; Evan R Jellison; Guido Ferrari; Cherie Green; Sindhu Cherian; Jonathan Irish; Virginia Litwin
Journal:  Cytometry A       Date:  2020-09-08       Impact factor: 4.714

  6 in total

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