Literature DB >> 24961896

Thermodynamic and conformational insights into the phase transition of a single flexible homopolymer chain using replica exchange Monte Carlo method.

Lei Wang1, Ningning Li, Shiyan Xiao, Haojun Liang.   

Abstract

The phase transition of a single flexible homopolymer chain in the limit condition of dilute solution is systematically investigated using a coarse-grained model. Replica exchange Monte Carlo method is used to enhance the performance of the conformation space exploration, and thus detailed investigation of phase behavior of the system can be provided. With the designed potentials, the coil-globule transition and the liquid-solid-like transition are identified, and the transition temperatures are measured with the conformational and thermodynamic analyses. Additionally, by extrapolating the coil-globule transition temperature, T Θ , and the liquid-solid-like transition temperature T(L → S) to the thermodynamic limit, N → ∞, we found no "tri-critical" point in the current model.

Year:  2014        PMID: 24961896     DOI: 10.1007/s00894-014-2296-3

Source DB:  PubMed          Journal:  J Mol Model        ISSN: 0948-5023            Impact factor:   1.810


  17 in total

1.  Efficient, multiple-range random walk algorithm to calculate the density of states.

Authors:  F Wang; D P Landau
Journal:  Phys Rev Lett       Date:  2001-03-05       Impact factor: 9.161

2.  Determining the density of states for classical statistical models: a random walk algorithm to produce a flat histogram.

Authors:  F Wang; D P Landau
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2001-10-17

3.  Microcanonical analyses of peptide aggregation processes.

Authors:  Christoph Junghans; Michael Bachmann; Wolfhard Janke
Journal:  Phys Rev Lett       Date:  2006-11-21       Impact factor: 9.161

4.  Microcanonical versus canonical analysis of protein folding.

Authors:  J Hernández-Rojas; J M Gomez Llorente
Journal:  Phys Rev Lett       Date:  2008-06-25       Impact factor: 9.161

5.  Canonical and microcanonical analysis of nongrafted homopolymer adsorption by an attractive substrate.

Authors:  Lei Wang; Tao Chen; Xiangsong Lin; Yuan Liu; Haojun Liang
Journal:  J Chem Phys       Date:  2009-12-28       Impact factor: 3.488

6.  Monte Carlo simulations of a single polymer chain under extension above and below the Theta temperature.

Authors: 
Journal:  Phys Rev E Stat Phys Plasmas Fluids Relat Interdiscip Topics       Date:  1996-01

7.  Effects of the interaction range on structural phases of flexible polymers.

Authors:  J Gross; T Neuhaus; T Vogel; M Bachmann
Journal:  J Chem Phys       Date:  2013-02-21       Impact factor: 3.488

8.  Conformational transitions of nongrafted polymers near an absorbing substrate.

Authors:  Michael Bachmann; Wolfhard Janke
Journal:  Phys Rev Lett       Date:  2005-07-29       Impact factor: 9.161

9.  Phase transitions of a single polymer chain: A Wang-Landau simulation study.

Authors:  Mark P Taylor; Wolfgang Paul; Kurt Binder
Journal:  J Chem Phys       Date:  2009-09-21       Impact factor: 3.488

10.  Examining the phase transition behavior of amphiphilic lipids in solution using statistical temperature molecular dynamics and replica-exchange Wang-Landau methods.

Authors:  Lili Gai; Thomas Vogel; Katie A Maerzke; Christopher R Iacovella; David P Landau; Peter T Cummings; Clare McCabe
Journal:  J Chem Phys       Date:  2013-08-07       Impact factor: 3.488

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