Literature DB >> 24961276

Helical organization of blood coagulation factor VIII on lipid nanotubes.

Jaimy Miller1, Daniela Dalm1, Alexey Y Koyfman2, Kirill Grushin1, Svetla Stoilova-McPhie3.   

Abstract

Cryo-electron microscopy (Cryo-EM)(1) is a powerful approach to investigate the functional structure of proteins and complexes in a hydrated state and membrane environment(2). Coagulation Factor VIII (FVIII)(3) is a multi-domain blood plasma glycoprotein. Defect or deficiency of FVIII is the cause for Hemophilia type A - a severe bleeding disorder. Upon proteolytic activation, FVIII binds to the serine protease Factor IXa on the negatively charged platelet membrane, which is critical for normal blood clotting(4). Despite the pivotal role FVIII plays in coagulation, structural information for its membrane-bound state is incomplete(5). Recombinant FVIII concentrate is the most effective drug against Hemophilia type A and commercially available FVIII can be expressed as human or porcine, both forming functional complexes with human Factor IXa(6,7). In this study we present a combination of Cryo-electron microscopy (Cryo-EM), lipid nanotechnology and structure analysis applied to resolve the membrane-bound structure of two highly homologous FVIII forms: human and porcine. The methodology developed in our laboratory to helically organize the two functional recombinant FVIII forms on negatively charged lipid nanotubes (LNT) is described. The representative results demonstrate that our approach is sufficiently sensitive to define the differences in the helical organization between the two highly homologous in sequence (86% sequence identity) proteins. Detailed protocols for the helical organization, Cryo-EM and electron tomography (ET) data acquisition are given. The two-dimensional (2D) and three-dimensional (3D) structure analysis applied to obtain the 3D reconstructions of human and porcine FVIII-LNT is discussed. The presented human and porcine FVIII-LNT structures show the potential of the proposed methodology to calculate the functional, membrane-bound organization of blood coagulation Factor VIII at high resolution.

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Year:  2014        PMID: 24961276      PMCID: PMC4126079          DOI: 10.3791/51254

Source DB:  PubMed          Journal:  J Vis Exp        ISSN: 1940-087X            Impact factor:   1.355


  21 in total

1.  A robust algorithm for the reconstruction of helical filaments using single-particle methods.

Authors:  E H Egelman
Journal:  Ultramicroscopy       Date:  2000-12       Impact factor: 2.689

2.  High level expression of recombinant porcine coagulation factor VIII.

Authors:  Christopher B Doering; John F Healey; Ernest T Parker; Rachel T Barrow; Pete Lollar
Journal:  J Biol Chem       Date:  2002-07-23       Impact factor: 5.157

3.  Automated electron microscope tomography using robust prediction of specimen movements.

Authors:  David N Mastronarde
Journal:  J Struct Biol       Date:  2005-10       Impact factor: 2.867

4.  EMAN2: an extensible image processing suite for electron microscopy.

Authors:  Guang Tang; Liwei Peng; Philip R Baldwin; Deepinder S Mann; Wen Jiang; Ian Rees; Steven J Ludtke
Journal:  J Struct Biol       Date:  2006-06-08       Impact factor: 2.867

5.  Visualizing density maps with UCSF Chimera.

Authors:  Thomas D Goddard; Conrad C Huang; Thomas E Ferrin
Journal:  J Struct Biol       Date:  2006-07-15       Impact factor: 2.867

6.  The iterative helical real space reconstruction method: surmounting the problems posed by real polymers.

Authors:  Edward H Egelman
Journal:  J Struct Biol       Date:  2006-07-11       Impact factor: 2.867

7.  Molecular cloning of a cDNA encoding human antihaemophilic factor.

Authors:  J J Toole; J L Knopf; J M Wozney; L A Sultzman; J L Buecker; D D Pittman; R J Kaufman; E Brown; C Shoemaker; E C Orr
Journal:  Nature       Date:  1984 Nov 22-28       Impact factor: 49.962

8.  Use of porcine factor VIII in the management of seventeen patients with factor VIII antibodies.

Authors:  L Gatti; P M Mannucci
Journal:  Thromb Haemost       Date:  1984-07-29       Impact factor: 5.249

9.  Domain organization of membrane-bound factor VIII.

Authors:  Svetla Stoilova-McPhie; Gillian C Lynch; Steven Ludtke; B Montgomery Pettitt
Journal:  Biopolymers       Date:  2013-07       Impact factor: 2.505

Review 10.  Factor VIII structure and function.

Authors:  Philip J Fay
Journal:  Int J Hematol       Date:  2006-02       Impact factor: 2.490

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  5 in total

1.  Membrane Interaction of the Factor VIIIa Discoidin Domains in Atomistic Detail.

Authors:  Jesper J Madsen; Y Zenmei Ohkubo; Günther H Peters; Johan H Faber; Emad Tajkhorshid; Ole H Olsen
Journal:  Biochemistry       Date:  2015-09-30       Impact factor: 3.162

2.  Lipid nanotechnologies for structural studies of membrane-associated proteins.

Authors:  Svetla Stoilova-McPhie; Kirill Grushin; Daniela Dalm; Jaimy Miller
Journal:  Proteins       Date:  2014-07-03

3.  Dimeric Organization of Blood Coagulation Factor VIII bound to Lipid Nanotubes.

Authors:  Daniela Dalm; Jesus G Galaz-Montoya; Jaimy L Miller; Kirill Grushin; Alex Villalobos; Alexey Y Koyfman; Michael F Schmid; Svetla Stoilova-McPhie
Journal:  Sci Rep       Date:  2015-06-17       Impact factor: 4.379

4.  Binding of Factor VIII to Lipid Nanodiscs Increases its Clotting Function in a Mouse Model of Hemophilia A.

Authors:  Keri Csencsits-Smith; Krill Grushin; Svetla Stoilova-McPhie
Journal:  J Blood Disord Transfus       Date:  2015-12-18

Review 5.  An overview on the investigation of nanomaterials' effect on plasma components: immunoglobulins and coagulation factor VIII, 2010-2020 review.

Authors:  Tahereh Zadeh Mehrizi; Kamran Mousavi Hosseini
Journal:  Nanoscale Adv       Date:  2021-05-18
  5 in total

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