Literature DB >> 24950784

Development of a concentration method for detection of tobacco mosaic virus in irrigation water.

Wei Chen1, Wenting Liu, Honghong Jiao, Huawei Zhang, Julong Cheng, Yunfeng Wu.   

Abstract

Tobacco mosaic virus (TMV) causes significant yield loss in susceptible crops irrigated with contaminated water. However, detection of TMV in water is difficult owing to extremely low concentrations of the virus. Here, we developed a simple method for the detection and quantification of TMV in irrigation water. TMV was reliably detected at concentrations as low as 10 viral copies/μL with real-time PCR. The sensitivity of detection was further improved using polyethylene glycol 6000 (PEG6000, MW 6000) to concentrate TMV from water samples. Among the 28 samples from Shaanxi Province examined with our method, 17 were tested positive after virus concentration. Infectivity of TMV in the original water sample as well as after concentration was confirmed using PCR. The limiting concentration of TMV in water to re-infect plants was determined as 10(2) viral copies/mL. The method developed in this study offers a novel approach to detect TMV in irrigation water, and may provide an effective tool to control crop infection.

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Mesh:

Year:  2014        PMID: 24950784      PMCID: PMC8206383          DOI: 10.1007/s12250-014-3461-7

Source DB:  PubMed          Journal:  Virol Sin        ISSN: 1995-820X            Impact factor:   4.327


  17 in total

1.  A highly sensitive immunocapture polymerase chain reaction method for plum pox potyvirus detection.

Authors:  T Wetzel; T Candresse; G Macquaire; M Ravelonandro; J Dunez
Journal:  J Virol Methods       Date:  1992-09       Impact factor: 2.014

2.  The purification and concentration of viruses by aqueous polymerphase systems.

Authors:  L PHILIPSON; P A ALBERTSSON; G FRICK
Journal:  Virology       Date:  1960-07       Impact factor: 3.616

3.  Development and validation of a concentration method for the detection of influenza a viruses from large volumes of surface water.

Authors:  Nathalie Deboosere; Srey Viseth Horm; Anthony Pinon; Jessica Gachet; Chloé Coldefy; Philippe Buchy; Michèle Vialette
Journal:  Appl Environ Microbiol       Date:  2011-04-15       Impact factor: 4.792

4.  Simultaneous detection of potato viruses, PLRV, PVA, PVX and PVY from dormant potato tubers by TaqMan real-time RT-PCR.

Authors:  Bright O Agindotan; Patrick J Shiel; Philip H Berger
Journal:  J Virol Methods       Date:  2007-02-05       Impact factor: 2.014

5.  A new and simple method for concentration of enteric viruses from water.

Authors:  J W Li; X W Wang; Q Y Rui; N Song; F G Zhang; Y C Ou; F H Chao
Journal:  J Virol Methods       Date:  1998-09       Impact factor: 2.014

6.  Development of a multiplex immunocapture RT-PCR assay for detection and differentiation of tomato and tobacco mosaic tobamoviruses.

Authors:  V Jacobi; G D Bachand; R C Hamelin; J D Castello
Journal:  J Virol Methods       Date:  1998-10       Impact factor: 2.014

7.  Immunoaffinity concentration and purification of waterborne enteric viruses for detection by reverse transcriptase PCR.

Authors:  K J Schwab; R De Leon; M D Sobsey
Journal:  Appl Environ Microbiol       Date:  1996-06       Impact factor: 4.792

8.  Detection of enteroviruses in groundwater with the polymerase chain reaction.

Authors:  M Abbaszadegan; M S Huber; C P Gerba; I L Pepper
Journal:  Appl Environ Microbiol       Date:  1993-05       Impact factor: 4.792

9.  A new method of RNA preparation for detection of hepatitis A virus in environmental samples by the polymerase chain reaction.

Authors:  F Yang; X Xu
Journal:  J Virol Methods       Date:  1993-06       Impact factor: 2.014

10.  Virioplankton 'pegylation': use of PEG (polyethylene glycol) to concentrate and purify viruses in pelagic ecosystems.

Authors:  J Colombet; A Robin; L Lavie; Y Bettarel; H M Cauchie; T Sime-Ngando
Journal:  J Microbiol Methods       Date:  2007-09-04       Impact factor: 2.363

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  2 in total

1.  Application of next generation sequencing technology on contamination monitoring in microbiology laboratory.

Authors:  Yan Xiao; Li Zhang; Bin Yang; Mingkun Li; Lili Ren; Jianwei Wang
Journal:  Biosaf Health       Date:  2019-03-01

2.  Fast detection of tobacco mosaic virus infected tobacco using laser-induced breakdown spectroscopy.

Authors:  Jiyu Peng; Kunlin Song; Hongyan Zhu; Wenwen Kong; Fei Liu; Tingting Shen; Yong He
Journal:  Sci Rep       Date:  2017-03-16       Impact factor: 4.379

  2 in total

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