| Literature DB >> 24940294 |
Sofian Gatfaoui1, Thierry Roisnel2, Hassouna Dhaouadi3, Houda Marouani1.
Abstract
In the structure of the title salt, C6H16N2 (2+)·2NO3 (-), the cations are connected to the anions through bifurcated N-H⋯(O,O) and weak C-H⋯O hydrogen bonds, generating corrugated layers parallel to the (100) plane. The organic cation is centrosymmetric and the diprotonated piperazine ring adopts a chair conformation, with the methyl groups occupying equatorial positions.Entities:
Year: 2014 PMID: 24940294 PMCID: PMC4051050 DOI: 10.1107/S1600536814012100
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C6H16N22+·2NO3− | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 2153 reflections |
| θ = 3.4–27.4° | |
| µ = 0.13 mm−1 | |
| β = 116.149 (8)° | Prism, colourless |
| 0.58 × 0.46 × 0.23 mm | |
| Bruker APEXII diffractometer | 1059 reflections with |
| Graphite monochromator | |
| CCD rotation images, thin slices scans | θmax = 27.5°, θmin = 3.4° |
| Absorption correction: multi-scan ( | |
| 4126 measured reflections | |
| 1195 independent reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 1195 reflections | (Δ/σ)max < 0.001 |
| 74 parameters | Δρmax = 0.30 e Å−3 |
| 0 restraints | Δρmin = −0.23 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| N1 | 0.20352 (15) | −0.09103 (10) | −0.37280 (12) | 0.0173 (2) | |
| O1 | 0.12714 (14) | −0.13760 (9) | −0.27150 (11) | 0.0218 (2) | |
| O2 | 0.24377 (15) | −0.16754 (10) | −0.47090 (11) | 0.0255 (2) | |
| O3 | 0.23709 (16) | 0.03059 (9) | −0.36962 (13) | 0.0312 (3) | |
| N2 | −0.02504 (15) | 0.08866 (10) | −0.14298 (12) | 0.0169 (2) | |
| H2A | −0.0683 | 0.1671 | −0.2001 | 0.020* | |
| H2B | 0.0282 | 0.0397 | −0.2044 | 0.020* | |
| C1 | 0.14685 (18) | 0.11399 (12) | 0.04232 (15) | 0.0165 (3) | |
| H1 | 0.0915 | 0.1730 | 0.1057 | 0.020* | |
| C2 | 0.21154 (17) | −0.01747 (12) | 0.14274 (15) | 0.0176 (3) | |
| H2C | 0.2778 | −0.0736 | 0.0869 | 0.021* | |
| H2D | 0.3146 | −0.0007 | 0.2653 | 0.021* | |
| C3 | 0.33291 (19) | 0.18189 (13) | 0.03060 (17) | 0.0224 (3) | |
| H3A | 0.3930 | 0.1230 | −0.0257 | 0.034* | |
| H3B | 0.4381 | 0.2036 | 0.1490 | 0.034* | |
| H3C | 0.2854 | 0.2621 | −0.0389 | 0.034* |
| N1 | 0.0184 (5) | 0.0158 (5) | 0.0155 (5) | 0.0005 (4) | 0.0054 (4) | 0.0005 (4) |
| O1 | 0.0288 (5) | 0.0212 (5) | 0.0202 (4) | −0.0019 (3) | 0.0153 (4) | −0.0007 (3) |
| O2 | 0.0331 (5) | 0.0274 (5) | 0.0203 (4) | 0.0033 (4) | 0.0158 (4) | −0.0025 (4) |
| O3 | 0.0356 (5) | 0.0134 (5) | 0.0400 (6) | −0.0040 (4) | 0.0125 (4) | 0.0023 (4) |
| N2 | 0.0199 (5) | 0.0162 (5) | 0.0150 (5) | 0.0030 (4) | 0.0081 (4) | 0.0023 (4) |
| C1 | 0.0185 (5) | 0.0144 (6) | 0.0161 (5) | 0.0018 (4) | 0.0071 (4) | −0.0010 (4) |
| C2 | 0.0166 (5) | 0.0168 (6) | 0.0178 (5) | 0.0020 (4) | 0.0062 (4) | 0.0016 (4) |
| C3 | 0.0207 (6) | 0.0178 (6) | 0.0287 (6) | 0.0003 (5) | 0.0112 (5) | 0.0009 (5) |
| N1—O2 | 1.2398 (13) | C1—C2 | 1.5188 (17) |
| N1—O3 | 1.2403 (14) | C1—H1 | 0.9800 |
| N1—O1 | 1.2706 (13) | C2—N2i | 1.4945 (15) |
| N2—C2i | 1.4945 (15) | C2—H2C | 0.9700 |
| N2—C1 | 1.5024 (14) | C2—H2D | 0.9700 |
| N2—H2A | 0.9000 | C3—H3A | 0.9600 |
| N2—H2B | 0.9000 | C3—H3B | 0.9600 |
| C1—C3 | 1.5163 (17) | C3—H3C | 0.9600 |
| O2—N1—O3 | 121.73 (10) | C2—C1—H1 | 108.8 |
| O2—N1—O1 | 119.62 (10) | N2i—C2—C1 | 111.39 (9) |
| O3—N1—O1 | 118.65 (10) | N2i—C2—H2C | 109.4 |
| C2i—N2—C1 | 112.95 (9) | C1—C2—H2C | 109.4 |
| C2i—N2—H2A | 109.0 | N2i—C2—H2D | 109.4 |
| C1—N2—H2A | 109.0 | C1—C2—H2D | 109.4 |
| C2i—N2—H2B | 109.0 | H2C—C2—H2D | 108.0 |
| C1—N2—H2B | 109.0 | C1—C3—H3A | 109.5 |
| H2A—N2—H2B | 107.8 | C1—C3—H3B | 109.5 |
| N2—C1—C3 | 109.74 (9) | H3A—C3—H3B | 109.5 |
| N2—C1—C2 | 109.11 (9) | C1—C3—H3C | 109.5 |
| C3—C1—C2 | 111.53 (10) | H3A—C3—H3C | 109.5 |
| N2—C1—H1 | 108.8 | H3B—C3—H3C | 109.5 |
| C3—C1—H1 | 108.8 |
| H··· | ||||
| N2—H2 | 0.90 | 1.99 | 2.8471 (14) | 158 |
| N2—H2 | 0.90 | 2.45 | 2.9899 (13) | 119 |
| N2—H2 | 0.90 | 2.07 | 2.9057 (13) | 153 |
| N2—H2 | 0.90 | 2.42 | 3.2172 (14) | 149 |
| C1—H1···O1i | 0.98 | 2.50 | 3.2614 (14) | 134 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N2—H2 | 0.90 | 1.99 | 2.8471 (14) | 158 |
| N2—H2 | 0.90 | 2.45 | 2.9899 (13) | 119 |
| N2—H2 | 0.90 | 2.07 | 2.9057 (13) | 153 |
| N2—H2 | 0.90 | 2.42 | 3.2172 (14) | 149 |
| C1—H1⋯O1iii | 0.98 | 2.50 | 3.2614 (14) | 134 |
Symmetry codes: (i) ; (ii) ; (iii) .