Literature DB >> 24940233

(Z)-1-[(2E)-3,4-Diphenyl-2,3-di-hydro-1,3-thia-zol-2-yl-idene]-2-[1-(4-hy-droxy-phen-yl)ethyl-idene]hydrazinium bromide including an unknown solvate.

Joel T Mague1, Shaaban K Mohamed2, Mehmet Akkurt3, Alaa A Hassan4, Mustafa R Albayati5.   

Abstract

In the title compound, C23H20N3OS(+)·Br(-), the di-hydro-thia-zole ring (r.m.s. deviation = 0.015 Å) is twisted with respect to each of the C- and N-bound phenyl rings and the hy-droxy-benzene ring, making dihedral angles of 76.0 (2), 71.2 (2) and 9.8 (2)°, respectively. In the crystal, inversion-related mol-ecules are linked by association of the bromide ions with the cations via N-H⋯Br and O-H⋯Br hydrogen-bonding inter-actions. These mol-ecules run in channels parallel to the a axis through face-to-face π-π stacking inter-actions between the hy-droxy-benzene rings [centroid-centroid distances = 3.785 (3) Å] which, in turn, are connected into layers parallel to (110) by weak C-H⋯π inter-actions. A small region of electron density well removed from the main mol-ecule and appearing disordered over a center of symmetry was removed with PLATON SQUEEZE [Spek (2009 ▶). Acta Cryst. D65, 148-15] following unsuccessful attempts to model it as plausible solvent molecule. The nature of the solvent was not known and hence, this is not taken into account when calculating M r and related data.

Entities:  

Year:  2014        PMID: 24940233      PMCID: PMC4051081          DOI: 10.1107/S1600536814010125

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general medicinal and industrial applications of five-membered S,N-heterocycles thia­zolines, see: Abhinit et al. (2009 ▶). For chemical and diverse medicinal properties of thia­zoles, see: Sreedevi et al. (2013 ▶); Milne (2000 ▶); De Souza & De Almeida (2003 ▶); Lednicer et al. (1990 ▶); Rehman et al. (2005 ▶); Knadler et al. (1986 ▶). For a similar structure, see: Mague et al. (2014 ▶).

Experimental

Crystal data

C23H20N3OSBr M = 466.39 Triclinic, a = 7.5987 (12) Å b = 12.3017 (19) Å c = 13.786 (2) Å α = 68.0760 (17)° β = 88.1540 (18)° γ = 72.6540 (18)° V = 1136.6 (3) Å3 Z = 2 Mo Kα radiation μ = 1.92 mm−1 T = 220 K 0.17 × 0.17 × 0.12 mm

Data collection

Bruker SMART APEX CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2013 ▶) T min = 0.56, T max = 0.80 11044 measured reflections 5146 independent reflections 3398 reflections with I > 2σ(I) R int = 0.042

Refinement

R[F 2 > 2σ(F 2)] = 0.058 wR(F 2) = 0.157 S = 1.01 5146 reflections 263 parameters 73 restraints H-atom parameters constrained Δρmax = 1.09 e Å−3 Δρmin = −0.48 e Å−3 Data collection: APEX2 (Bruker, 2013 ▶); cell refinement: SAINT (Bruker, 2013 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS2013 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL2013 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶); software used to prepare material for publication: WinGX (Farrugia, 2012 ▶) and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536814010125/tk5311sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814010125/tk5311Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S1600536814010125/tk5311Isup3.cml CCDC reference: 1000895 Additional supporting information: crystallographic information; 3D view; checkCIF report
C23H20N3OS+·BrZ = 2
Mr = 466.39F(000) = 476
Triclinic, P1Dx = 1.363 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 7.5987 (12) ÅCell parameters from 4151 reflections
b = 12.3017 (19) Åθ = 2.8–26.7°
c = 13.786 (2) ŵ = 1.92 mm1
α = 68.0760 (17)°T = 220 K
β = 88.1540 (18)°Block, colourless
γ = 72.6540 (18)°0.17 × 0.17 × 0.12 mm
V = 1136.6 (3) Å3
Bruker SMART APEX CCD diffractometer5146 independent reflections
Radiation source: fine-focus sealed tube3398 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.042
Detector resolution: 8.3660 pixels mm-1θmax = 27.5°, θmin = 1.9°
φ and ω scansh = −9→9
Absorption correction: multi-scan (SADABS; Bruker, 2013)k = −15→15
Tmin = 0.56, Tmax = 0.80l = −17→17
11044 measured reflections
Refinement on F273 restraints
Least-squares matrix: fullHydrogen site location: mixed
R[F2 > 2σ(F2)] = 0.058H-atom parameters constrained
wR(F2) = 0.157w = 1/[σ2(Fo2) + (0.0867P)2] where P = (Fo2 + 2Fc2)/3
S = 1.01(Δ/σ)max < 0.001
5146 reflectionsΔρmax = 1.09 e Å3
263 parametersΔρmin = −0.48 e Å3
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. H-atoms attached to carbon were placed in calculated positions (C—H = 0.95 - 0.98 Å) while those attached to nitrogen were placed in locations derived from a difference map and their coordinates adjusted to give N—H = 0.91 Å. That attached to oxygen was placed in an idealized position and the C—C—O—H torsion angle refined (AFIX 147)·All were included as riding contributions with isotropic displacement parameters 1.2 - 1.5 times those of the attached atoms. A small region of electron density well removed from the main molecule and appearing disordered over a center of symmetry was removed with PLATON SQUEEZE following unsuccessful attempts to model it as plausible lattice solvent (Spek, 2014).
xyzUiso*/Ueq
S10.24831 (13)0.51039 (10)0.99502 (8)0.0418 (3)
O1−0.1920 (4)1.0140 (3)1.2638 (2)0.0599 (11)
N10.1776 (4)0.5582 (3)0.8008 (2)0.0376 (10)
N2−0.0083 (4)0.7072 (3)0.8605 (2)0.0427 (11)
N3−0.0284 (5)0.7434 (3)0.9459 (2)0.0434 (11)
C10.3784 (5)0.4108 (4)0.9384 (3)0.0433 (12)
C20.3282 (5)0.4476 (4)0.8368 (3)0.0399 (12)
C30.1253 (5)0.6024 (4)0.8761 (3)0.0393 (12)
C40.4141 (5)0.3930 (4)0.7614 (3)0.0398 (12)
C50.3820 (6)0.2897 (4)0.7589 (3)0.0480 (16)
C60.4610 (6)0.2396 (4)0.6870 (4)0.0510 (16)
C70.5711 (7)0.2920 (5)0.6183 (4)0.0604 (17)
C80.6055 (8)0.3930 (5)0.6209 (5)0.085 (3)
C90.5280 (7)0.4447 (5)0.6915 (4)0.070 (2)
C100.0904 (5)0.6216 (4)0.6942 (3)0.0389 (12)
C11−0.0203 (6)0.5700 (4)0.6591 (4)0.0543 (17)
C12−0.1016 (7)0.6310 (5)0.5574 (4)0.0689 (19)
C13−0.0764 (6)0.7396 (5)0.4938 (4)0.0608 (18)
C140.0333 (6)0.7896 (5)0.5299 (4)0.0576 (17)
C150.1188 (6)0.7291 (4)0.6313 (3)0.0495 (14)
C16−0.1282 (5)0.8544 (4)0.9258 (3)0.0380 (12)
C17−0.2232 (6)0.9401 (4)0.8202 (3)0.0478 (14)
C18−0.1445 (5)0.8977 (4)1.0145 (3)0.0388 (12)
C19−0.0230 (6)0.8316 (4)1.1041 (3)0.0443 (12)
C20−0.0409 (6)0.8719 (4)1.1875 (3)0.0480 (16)
C21−0.1813 (6)0.9791 (4)1.1794 (3)0.0446 (14)
C22−0.2998 (6)1.0452 (4)1.0906 (3)0.0470 (14)
C23−0.2808 (6)1.0045 (4)1.0093 (3)0.0451 (14)
Br10.46263 (6)0.27288 (4)0.21975 (3)0.0504 (2)
H10.474200.338400.975700.0520*
H1O−0.278701.078701.251000.0900*
H2−0.091600.733600.804300.0510*
H50.305600.252800.806500.0570*
H60.438000.169000.686000.0620*
H70.623600.258700.569000.0730*
H80.683700.428300.573700.1020*
H90.552800.514900.692000.0830*
H11−0.039500.495800.703200.0650*
H12−0.175600.597000.531500.0830*
H13−0.134400.780400.425000.0730*
H140.050500.864500.486000.0690*
H150.195500.762200.656300.0590*
H17A−0.268201.023300.818600.0720*
H17B−0.326600.915600.806000.0720*
H17C−0.136700.936900.767300.0720*
H190.071600.759701.109000.0530*
H200.041100.827001.248600.0580*
H22−0.393401.117801.085000.0570*
H23−0.362701.050600.948300.0540*
U11U22U33U12U13U23
S10.0397 (6)0.0478 (6)0.0404 (5)−0.0129 (5)0.0012 (4)−0.0197 (5)
O10.068 (2)0.069 (2)0.0568 (19)−0.0195 (17)0.0135 (15)−0.0413 (17)
N10.0332 (17)0.0438 (19)0.0401 (17)−0.0070 (14)0.0016 (13)−0.0244 (15)
N20.0413 (19)0.050 (2)0.0405 (18)−0.0047 (15)−0.0006 (14)−0.0282 (16)
N30.050 (2)0.050 (2)0.0363 (17)−0.0139 (17)0.0061 (14)−0.0244 (16)
C10.038 (2)0.045 (2)0.047 (2)−0.0093 (18)0.0020 (17)−0.0202 (19)
C20.036 (2)0.040 (2)0.046 (2)−0.0114 (17)0.0024 (16)−0.0192 (18)
C30.036 (2)0.044 (2)0.044 (2)−0.0112 (17)0.0021 (16)−0.0243 (18)
C40.035 (2)0.036 (2)0.049 (2)−0.0077 (17)0.0045 (16)−0.0193 (18)
C50.047 (2)0.052 (3)0.057 (3)−0.026 (2)0.0103 (19)−0.026 (2)
C60.049 (3)0.045 (2)0.067 (3)−0.009 (2)−0.001 (2)−0.034 (2)
C70.059 (3)0.058 (3)0.068 (3)−0.008 (2)0.018 (2)−0.037 (3)
C80.092 (4)0.073 (4)0.114 (5)−0.043 (3)0.065 (4)−0.054 (4)
C90.076 (4)0.059 (3)0.104 (4)−0.038 (3)0.050 (3)−0.054 (3)
C100.033 (2)0.046 (2)0.042 (2)−0.0056 (17)0.0046 (16)−0.0266 (18)
C110.052 (3)0.060 (3)0.055 (3)−0.020 (2)0.000 (2)−0.024 (2)
C120.060 (3)0.090 (4)0.070 (3)−0.024 (3)−0.013 (2)−0.043 (3)
C130.045 (3)0.085 (4)0.044 (2)−0.006 (2)−0.0011 (19)−0.026 (2)
C140.049 (3)0.062 (3)0.050 (3)−0.011 (2)0.003 (2)−0.013 (2)
C150.044 (2)0.060 (3)0.047 (2)−0.020 (2)0.0041 (18)−0.020 (2)
C160.031 (2)0.043 (2)0.045 (2)−0.0111 (17)0.0097 (16)−0.0230 (18)
C170.051 (3)0.049 (2)0.048 (2)−0.016 (2)0.0018 (18)−0.023 (2)
C180.038 (2)0.046 (2)0.043 (2)−0.0223 (18)0.0144 (16)−0.0223 (18)
C190.047 (2)0.048 (2)0.048 (2)−0.0208 (19)0.0112 (18)−0.025 (2)
C200.050 (3)0.055 (3)0.044 (2)−0.022 (2)0.0069 (18)−0.020 (2)
C210.049 (2)0.053 (3)0.050 (2)−0.026 (2)0.0232 (19)−0.033 (2)
C220.043 (2)0.055 (3)0.052 (2)−0.015 (2)0.0135 (18)−0.031 (2)
C230.041 (2)0.052 (3)0.051 (2)−0.0170 (19)0.0138 (18)−0.028 (2)
Br10.0562 (3)0.0514 (3)0.0488 (3)−0.0152 (2)−0.0025 (2)−0.0252 (2)
S1—C11.741 (5)C16—C181.494 (6)
S1—C31.710 (4)C18—C231.388 (7)
O1—C211.375 (5)C18—C191.384 (6)
O1—H1O0.8300C19—C201.401 (6)
N1—C31.341 (5)C20—C211.396 (7)
N1—C101.451 (5)C21—C221.365 (6)
N1—C21.418 (6)C22—C231.376 (6)
N2—C31.329 (6)C1—H10.9400
N2—N31.395 (4)C5—H50.9400
N3—C161.277 (6)C6—H60.9400
N2—H20.9100C7—H70.9400
C1—C21.331 (5)C8—H80.9400
C2—C41.474 (6)C9—H90.9400
C4—C91.378 (7)C11—H110.9400
C4—C51.376 (7)C12—H120.9400
C5—C61.386 (7)C13—H130.9400
C6—C71.352 (7)C14—H140.9400
C7—C81.357 (9)C15—H150.9400
C8—C91.379 (9)C17—H17A0.9700
C10—C111.385 (7)C17—H17B0.9700
C10—C151.360 (6)C17—H17C0.9700
C11—C121.380 (7)C19—H190.9400
C12—C131.363 (8)C20—H200.9400
C13—C141.372 (8)C22—H220.9400
C14—C151.387 (6)C23—H230.9400
C16—C171.490 (6)
C1—S1—C389.3 (2)O1—C21—C20116.9 (4)
C21—O1—H1O109.00C20—C21—C22120.5 (4)
C2—N1—C10125.3 (3)C21—C22—C23119.3 (5)
C3—N1—C10122.2 (4)C18—C23—C22122.1 (4)
C2—N1—C3112.5 (3)S1—C1—H1124.00
N3—N2—C3114.7 (3)C2—C1—H1123.00
N2—N3—C16115.3 (3)C4—C5—H5120.00
C3—N2—H2115.00C6—C5—H5120.00
N3—N2—H2128.00C5—C6—H6120.00
S1—C1—C2113.1 (4)C7—C6—H6120.00
N1—C2—C1111.8 (4)C6—C7—H7120.00
N1—C2—C4119.4 (3)C8—C7—H7120.00
C1—C2—C4128.7 (4)C7—C8—H8119.00
S1—C3—N1113.3 (3)C9—C8—H8119.00
N1—C3—N2123.7 (3)C4—C9—H9120.00
S1—C3—N2123.0 (3)C8—C9—H9120.00
C5—C4—C9118.5 (4)C10—C11—H11121.00
C2—C4—C5120.9 (4)C12—C11—H11121.00
C2—C4—C9120.6 (5)C11—C12—H12119.00
C4—C5—C6120.7 (4)C13—C12—H12119.00
C5—C6—C7120.1 (5)C12—C13—H13120.00
C6—C7—C8119.7 (5)C14—C13—H13120.00
C7—C8—C9121.2 (6)C13—C14—H14120.00
C4—C9—C8119.8 (6)C15—C14—H14120.00
C11—C10—C15121.6 (4)C10—C15—H15120.00
N1—C10—C11118.6 (4)C14—C15—H15120.00
N1—C10—C15119.8 (4)C16—C17—H17A109.00
C10—C11—C12117.9 (5)C16—C17—H17B109.00
C11—C12—C13121.2 (5)C16—C17—H17C109.00
C12—C13—C14120.1 (5)H17A—C17—H17B110.00
C13—C14—C15119.8 (5)H17A—C17—H17C110.00
C10—C15—C14119.4 (4)H17B—C17—H17C109.00
C17—C16—C18120.0 (4)C18—C19—H19120.00
N3—C16—C18116.5 (3)C20—C19—H19120.00
N3—C16—C17123.5 (4)C19—C20—H20120.00
C16—C18—C19120.4 (4)C21—C20—H20120.00
C16—C18—C23121.1 (4)C21—C22—H22120.00
C19—C18—C23118.5 (4)C23—C22—H22120.00
C18—C19—C20120.0 (4)C18—C23—H23119.00
C19—C20—C21119.6 (4)C22—C23—H23119.00
O1—C21—C22122.6 (4)
C3—S1—C1—C20.0 (4)C2—C4—C9—C8−179.3 (5)
C1—S1—C3—N11.4 (3)C5—C4—C9—C80.4 (7)
C1—S1—C3—N2−178.5 (4)C4—C5—C6—C70.1 (7)
C3—N1—C2—C12.3 (5)C5—C6—C7—C80.7 (8)
C3—N1—C2—C4−174.3 (4)C6—C7—C8—C9−1.0 (9)
C10—N1—C2—C1−179.8 (4)C7—C8—C9—C40.4 (9)
C10—N1—C2—C43.6 (6)N1—C10—C11—C12−179.7 (4)
C2—N1—C3—S1−2.4 (4)C15—C10—C11—C120.2 (7)
C2—N1—C3—N2177.5 (4)N1—C10—C15—C14−179.4 (4)
C10—N1—C3—S1179.6 (3)C11—C10—C15—C140.8 (7)
C10—N1—C3—N2−0.5 (6)C10—C11—C12—C13−1.0 (8)
C2—N1—C10—C1172.5 (5)C11—C12—C13—C140.9 (9)
C2—N1—C10—C15−107.4 (5)C12—C13—C14—C150.1 (8)
C3—N1—C10—C11−109.8 (5)C13—C14—C15—C10−0.9 (8)
C3—N1—C10—C1570.3 (5)N3—C16—C18—C1915.2 (6)
C3—N2—N3—C16166.3 (4)N3—C16—C18—C23−164.8 (4)
N3—N2—C3—S16.3 (5)C17—C16—C18—C19−163.8 (4)
N3—N2—C3—N1−173.6 (4)C17—C16—C18—C2316.2 (6)
N2—N3—C16—C171.9 (6)C16—C18—C19—C20−179.1 (4)
N2—N3—C16—C18−177.1 (3)C23—C18—C19—C200.9 (7)
S1—C1—C2—N1−1.3 (5)C16—C18—C23—C22179.2 (4)
S1—C1—C2—C4175.0 (4)C19—C18—C23—C22−0.9 (7)
N1—C2—C4—C5−105.2 (5)C18—C19—C20—C21−0.2 (7)
N1—C2—C4—C974.5 (6)C19—C20—C21—O1180.0 (4)
C1—C2—C4—C578.8 (6)C19—C20—C21—C22−0.6 (7)
C1—C2—C4—C9−101.5 (6)O1—C21—C22—C23−179.9 (4)
C2—C4—C5—C6179.1 (4)C20—C21—C22—C230.6 (7)
C9—C4—C5—C6−0.6 (7)C21—C22—C23—C180.1 (7)
D—H···AD—HH···AD···AD—H···A
O1—H1O···Br1i0.832.503.328 (4)178
N2—H2···Br1ii0.912.883.570 (3)134
C5—H5···Cg4iii0.942.763.610 (5)152
Table 1

Hydrogen-bond geometry (Å, °)

Cg4 is the centroid of the C18–C23 benzene ring.

D—H⋯A D—HH⋯A DA D—H⋯A
O1—H1O⋯Br1i 0.832.503.328 (4)178
N2—H2⋯Br1ii 0.912.883.570 (3)134
C5—H5⋯Cg4iii 0.942.763.610 (5)152

Symmetry codes: (i) ; (ii) ; (iii) .

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3.  Nizatidine, an H2-blocker. Its metabolism and disposition in man.

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4.  2-((1E)-1-{2-[(2Z)-4-(4-Bromo-phen-yl)-3-phenyl-2,3-di-hydro-1,3-thia-zol-2-yl-idene]hydrazin-1-yl-idene}eth-yl)pyridin-1-ium bromide monohydrate.

Authors:  Joel T Mague; Shaaban K Mohamed; Mehmet Akkurt; Ahmed T Abd El-Alaziz; Mustafa R Albayati
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-02-22

5.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
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1.  Crystal structure of (E)-1-(3-benzyl-5-phenyl-1,3-thia-zol-2-yl-idene)-2-[(E)-1,2,3,4-tetra-hydro-naphthalen-1-yl-idene]hydrazin-1-ium bromide.

Authors:  Shaaban K Mohamed; Sahar M I Elgarhy; Alaa A Hassan; Güneş Demirtaş; Joel T Mague; Youssef Ramli
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