| Literature DB >> 24940214 |
Wojciech Starosta1, Janusz Leciejewicz1.
Abstract
The title coordination polymer, {[Li2(C8H2N2O8)(H2O)2]·2.5H2O} n , is built up from mol-ecular ribbons propagating in the c-axis direction of the ortho-rhom-bic unit cell; the ligand bridges two Li(+) ions using both its N,O,O'-bonding sites and adjacent Li(+) ions are bridged by pairs of water mol-ecules. The coordination geometry of the metal ion is distorted trigonal bipyramidal, with the ligand O atoms in the axial sites. Two of the carboxyl-ate groups of the ligand remain protonated and form short symmetric O-H⋯O hydrogen bonds. In the crystal, the ribbons inter-act via a network of O-H⋯O hydrogen bonds in which coordinating water mol-ecules act as donors and carboxyl-ate O atoms within adjacent ribbons act as acceptors, giving rise to a three-dimensional framework. O-H⋯N inter-actions are also observed. The asymmetric unit contains quarter of the ligand and the complete ligand has 2/m symmetry; the Li(+) ion lies on a special position with m.. site symmetry. Both bridging water mol-ecules have m2m site symmetry and both lattice water mol-ecules have m.. site symmetry; one of the latter was modelled with a site occupancy of 0.25.Entities:
Year: 2014 PMID: 24940214 PMCID: PMC4050999 DOI: 10.1107/S160053681401174X
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Li(C8H2N2O8)(H2O)2]·2.5H2O | |
| Orthorhombic, | Mo |
| Hall symbol: -C 2c 2 | Cell parameters from 3296 reflections |
| θ = 3.8–31.9° | |
| µ = 0.15 mm−1 | |
| Block, colourless | |
| 0.24 × 0.20 × 0.05 mm |
| Agilent SuperNova (Dual, Cu at zero, Eos) diffractometer | 1151 independent reflections |
| Radiation source: SuperNova (Mo) X-ray Source | 997 reflections with |
| Mirror monochromator | |
| Detector resolution: 16.0131 pixels mm-1 | θmax = 30.0°, θmin = 3.4° |
| ω scans | |
| Absorption correction: multi-scan ( | |
| 7496 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 1151 reflections | (Δ/σ)max < 0.001 |
| 85 parameters | Δρmax = 0.25 e Å−3 |
| 3 restraints | Δρmin = −0.29 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Occ. (<1) | |||||
| O1 | 0.67161 (8) | 0.07053 (19) | 0.35355 (5) | 0.0435 (3) | |
| O4 | 0.5000 | −0.1345 (3) | 0.2500 | 0.0388 (4) | |
| O2 | 0.79263 (8) | 0.04117 (18) | 0.43921 (5) | 0.0413 (3) | |
| O5 | 0.33035 (11) | 0.4166 (2) | 0.7500 | 0.0379 (3) | |
| O3 | 0.5000 | 0.3004 (4) | 0.2500 | 0.0533 (6) | |
| N1 | 0.5000 | 0.0321 (2) | 0.43101 (7) | 0.0270 (3) | |
| C2 | 0.59630 (8) | 0.01679 (18) | 0.46407 (6) | 0.0259 (3) | |
| C7 | 0.69421 (10) | 0.0441 (2) | 0.41465 (6) | 0.0310 (3) | |
| Li1 | 0.5000 | 0.0823 (7) | 0.32284 (17) | 0.0463 (8) | |
| H4 | 0.555 (2) | −0.229 (5) | 0.2500 | 0.070 (9)* | |
| H3 | 0.445 (3) | 0.377 (7) | 0.2500 | 0.097 (13)* | |
| H5 | 0.2920 (19) | 0.432 (3) | 0.7135 (10) | 0.068 (7)* | |
| H2 | 0.797 (3) | 0.0000 | 0.5000 | 0.097 (12)* | |
| O6 | 0.5000 | 0.4486 (17) | 0.3733 (5) | 0.077 (2) | 0.25 |
| H61 | 0.5000 | 0.578 (7) | 0.386 (7) | 0.115* | 0.25 |
| H62 | 0.5000 | 0.39 (2) | 0.413 (4) | 0.115* | 0.25 |
| O1 | 0.0302 (5) | 0.0732 (8) | 0.0270 (5) | −0.0022 (4) | 0.0051 (3) | 0.0037 (4) |
| O4 | 0.0299 (9) | 0.0406 (10) | 0.0459 (11) | 0.000 | 0.000 | 0.000 |
| O2 | 0.0207 (4) | 0.0659 (7) | 0.0374 (5) | −0.0024 (4) | 0.0029 (3) | 0.0018 (4) |
| O5 | 0.0240 (6) | 0.0562 (9) | 0.0334 (7) | 0.0024 (6) | 0.000 | 0.000 |
| O3 | 0.0336 (11) | 0.0356 (11) | 0.0908 (18) | 0.000 | 0.000 | 0.000 |
| N1 | 0.0207 (6) | 0.0370 (7) | 0.0232 (6) | 0.000 | 0.000 | −0.0010 (5) |
| C2 | 0.0198 (5) | 0.0335 (6) | 0.0244 (5) | −0.0005 (4) | 0.0010 (4) | −0.0025 (4) |
| C7 | 0.0226 (5) | 0.0410 (7) | 0.0295 (6) | −0.0015 (4) | 0.0048 (4) | −0.0021 (5) |
| Li1 | 0.0421 (18) | 0.070 (2) | 0.0271 (15) | 0.000 | 0.000 | 0.0075 (15) |
| O6 | 0.049 (4) | 0.101 (7) | 0.081 (5) | 0.000 | 0.000 | −0.020 (5) |
| O1—C7 | 1.2242 (16) | O3—Li1ii | 1.982 (4) |
| Li1—O1 | 2.1538 (13) | O3—H3 | 0.82 (4) |
| Li1—O1i | 2.1538 (13) | N1—C2 | 1.3289 (12) |
| Li1—O3 | 1.982 (4) | N1—C2i | 1.3289 (12) |
| Li1—O4 | 1.976 (4) | C2—C2iii | 1.406 (2) |
| Li1—N1 | 2.116 (3) | C2—C7 | 1.5287 (15) |
| O4—Li1ii | 1.976 (4) | Li1—O6 | 2.536 (11) |
| O4—H4 | 0.90 (3) | Li1—Li1ii | 2.817 (7) |
| O2—C7 | 1.2780 (15) | O6—H61 | 0.86 (2) |
| O2—H2 | 1.2057 (19) | O6—H62 | 0.87 (2) |
| O5—H5 | 0.85 (2) | ||
| C7—O1—Li1 | 119.00 (12) | O3—Li1—O1 | 102.74 (10) |
| Li1ii—O4—Li1 | 91.0 (2) | N1—Li1—O1 | 73.87 (9) |
| Li1ii—O4—H4 | 118.2 (11) | O4—Li1—O1i | 99.91 (12) |
| Li1—O4—H4 | 118.2 (11) | O3—Li1—O1i | 102.74 (10) |
| C7—O2—H2 | 113.8 (18) | N1—Li1—O1i | 73.87 (9) |
| Li1—O3—Li1ii | 90.6 (3) | O1—Li1—O1i | 147.72 (17) |
| Li1—O3—H3 | 114.8 (18) | O4—Li1—O6 | 157.2 (3) |
| Li1ii—O3—H3 | 114.8 (18) | O3—Li1—O6 | 67.9 (3) |
| C2—N1—C2i | 121.76 (13) | N1—Li1—O6 | 76.1 (3) |
| C2—N1—Li1 | 119.12 (7) | O1—Li1—O6 | 85.76 (13) |
| C2i—N1—Li1 | 119.12 (7) | O1i—Li1—O6 | 85.76 (13) |
| N1—C2—C2iii | 119.12 (7) | O4—Li1—Li1ii | 44.52 (11) |
| N1—C2—C7 | 111.44 (10) | O3—Li1—Li1ii | 44.70 (13) |
| C2iii—C2—C7 | 129.43 (6) | N1—Li1—Li1ii | 171.28 (12) |
| O1—C7—O2 | 124.56 (11) | O1—Li1—Li1ii | 106.01 (9) |
| O1—C7—C2 | 116.56 (11) | O1i—Li1—Li1ii | 106.01 (9) |
| O2—C7—C2 | 118.87 (11) | O6—Li1—Li1ii | 112.6 (3) |
| O4—Li1—O3 | 89.22 (15) | Li1—O6—H61 | 174 (10) |
| O4—Li1—N1 | 126.8 (2) | Li1—O6—H62 | 85 (10) |
| O3—Li1—N1 | 144.0 (2) | H61—O6—H62 | 101 (3) |
| O4—Li1—O1 | 99.91 (12) | ||
| C2i—N1—C2—C2iii | 0.1 (3) | Li1ii—O3—Li1—O6 | 180.000 (2) |
| Li1—N1—C2—C2iii | −179.94 (18) | C2—N1—Li1—O4 | 90.02 (13) |
| C2i—N1—C2—C7 | −178.85 (10) | C2i—N1—Li1—O4 | −90.02 (13) |
| Li1—N1—C2—C7 | 1.1 (2) | C2—N1—Li1—O3 | −89.98 (13) |
| Li1—O1—C7—O2 | −177.66 (16) | C2i—N1—Li1—O3 | 89.98 (13) |
| Li1—O1—C7—C2 | 1.3 (2) | C2—N1—Li1—O1 | −0.42 (18) |
| N1—C2—C7—O1 | −1.57 (17) | C2i—N1—Li1—O1 | 179.54 (12) |
| C2iii—C2—C7—O1 | 179.61 (16) | C2—N1—Li1—O1i | −179.55 (12) |
| N1—C2—C7—O2 | 177.46 (12) | C2i—N1—Li1—O1i | 0.42 (18) |
| C2iii—C2—C7—O2 | −1.4 (2) | C2—N1—Li1—O6 | −89.98 (13) |
| Li1ii—O4—Li1—O3 | 0.0 | C2i—N1—Li1—O6 | 89.98 (13) |
| Li1ii—O4—Li1—N1 | 180.0 | C2—N1—Li1—Li1ii | 90.02 (13) |
| Li1ii—O4—Li1—O1 | −102.80 (12) | C2i—N1—Li1—Li1ii | −90.02 (13) |
| Li1ii—O4—Li1—O1i | 102.80 (12) | C7—O1—Li1—O4 | −126.14 (15) |
| Li1ii—O4—Li1—O6 | 0.000 (4) | C7—O1—Li1—O3 | 142.40 (14) |
| Li1ii—O3—Li1—O4 | 0.0 | C7—O1—Li1—N1 | −0.56 (19) |
| Li1ii—O3—Li1—N1 | 180.0 | C7—O1—Li1—O1i | 1.0 (5) |
| Li1ii—O3—Li1—O1 | 99.99 (14) | C7—O1—Li1—O6 | 76.2 (3) |
| Li1ii—O3—Li1—O1i | −99.99 (14) | C7—O1—Li1—Li1ii | −171.48 (10) |
| H··· | ||||
| O6—H62···N1 | 0.87 (2) | 2.28 (11) | 2.886 (12) | 127 (12) |
| O5—H5···O1iv | 0.85 (2) | 1.95 (2) | 2.7711 (13) | 163 (2) |
| O3—H3···O5v | 0.82 (4) | 1.92 (4) | 2.730 (2) | 173 (4) |
| O4—H4···O5vi | 0.90 (3) | 1.83 (3) | 2.726 (2) | 179 (3) |
| O2—H2···O2iii | 1.21 (1) | 1.21 (1) | 2.409 (3) | 175 (1) |
Selected bond lengths (Å)
| Li1—O1 | 2.1538 (13) |
| Li1—O3 | 1.982 (4) |
| Li1—O4 | 1.976 (4) |
| Li1—N1 | 2.116 (3) |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| O6—H62⋯N1 | 0.87 (2) | 2.28 (11) | 2.886 (12) | 127 (12) |
| O5—H5⋯O1i | 0.85 (2) | 1.95 (2) | 2.7711 (13) | 163 (2) |
| O3—H3⋯O5ii | 0.82 (4) | 1.92 (4) | 2.730 (2) | 173 (4) |
| O4—H4⋯O5iii | 0.90 (3) | 1.83 (3) | 2.726 (2) | 179 (3) |
| O2—H2⋯O2iv | 1.21 (1) | 1.21 (1) | 2.409 (3) | 175 (1) |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .