| Literature DB >> 24940036 |
Wafaa A Emam1, Haidy E Zidan1, Bahaa-Eldin H Abdulhalim2, Sherif A Dabour2, Manar A Ghali2, Aliaa T Kamal1.
Abstract
PURPOSE: To analyze the association of polymorphisms of the endothelial nitric oxide synthase (NOS3) gene and nitric oxide (NO) levels with high-tension primary open-angle glaucoma (POAG) in an Egyptian population.Entities:
Mesh:
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Year: 2014 PMID: 24940036 PMCID: PMC4057245
Source DB: PubMed Journal: Mol Vis ISSN: 1090-0535 Impact factor: 2.367
Primers used for genotyping of endothelial nitric oxide synthase (NOS3) polymorphisms*.
| Gene name | Primer (5’-3’) |
|---|---|
| T-786C ( | TGGAGAGTGCTGGTGTACCCCA |
| GCCTCCACCCCCACCCTGTC | |
| Glu298Asp ( | AAGGCAGGAGACAGTGGATGGA |
| CCCAGTCAATCCCTTTGGTGCTCA | |
| VNTR-a/b intron 4 [ | AGGCCCTATGGTAGTGCCTTT |
| TCTCTTAGTGCTGTGCTCAC |
Demographic characteristics of the high-tension primary open-angle glaucoma (POAG) patient (n=160) and controls (n=110).
| Parameters | POAG patients | Controls | P value |
|---|---|---|---|
| Age (years) | |||
| Range | 41–75 | 55–78 | |
| Mean ± SD | 48.9±7.0 | 63.8±6.3 | <0.001* |
| Sex; n (%) | |||
| Male | 76 (47.5) | 56 (50.9) | |
| Female | 84 (52.5) | 54 (49.1) | 0.58** |
* Two-tailed Student t test **Two-tailed chi square (χ2) test p is significant at <0.05
Genotype and allele distributions of polymorphisms of endothelial nitric oxide synthase (NOS3) gene* in primary high-tension open-angle glaucoma patients (n=160) and controls (n=110) in Egyptians.
| Genotype | Patients, No (%) | Controls, No (%) | Odds ratio (95%CI) | P value** |
|---|---|---|---|---|
| TT | 63 (39.4) | 60 (54.5) | 1 (reference) | – |
| TC | 59 (36.9) | 38 (34.5) | 1.11 (0.67–1.84) | 0.70 |
| CC | 38 (23.8) | 12 (10.9) | 2.54 (1.26–5.13) | 0.007 |
| T allele | 185 (57.8) | 158 (71.8) | 1 (reference) | <0.001 |
| C allele | 135 (42.2) | 62 (28.2) | 1.86 (1.29–2.69) | |
| Glu/Glu | 81 (50.6) | 63 (57.3) | 1 (reference) | – |
| Glu/Asp | 59 (36.9) | 37 (33.6) | 1.15 (0.69–1.92) | 0.58 |
| Asp/Asp | 20 (12.5) | 10 (9.1) | 1.43 (0.64–3.18) | 0.38 |
| Glu allele | 221 (69.1) | 163 (74.1) | 1 (reference) | 0.21 |
| Asp allele | 99 (30.9) | 57 (25.9) | 1.28 (0.87–1.88) | |
| Intron 4 polymorphism of | ||||
| b/b | 110 (68.8) | 70 (63.6) | 1 (reference) | – |
| b/a | 41 (25.6) | 32 (29.1) | 0.84 (0.49–1.45) | 0.53 |
| a/a | 9 (5.6) | 8 (7.3) | 0.76 (0.28–2.03) | 0.58 |
| b allele | 261 (81.6) | 172 (78.2) | 1 (reference) | 0.33 |
| a allele | 59 (18.4) | 48 (21.8) | 0.81 (0.53–1.24) | |
*Hardy–Weinberg equilibrium among controls (p=0.12 for T-786C, 0.19 for Glu298Asp, and 0.12 for intron 4 genotypes) **Two-tailed chi square (χ2) test significant at <0.05; CI: confidence interval
Genotype and allele distributions of polymorphisms of endothelial nitric oxide synthase (NOS3) gene in high-tension primary open-angle glaucoma patients and controls in Egyptians.
| Parameters | Males | Females | ||||||
|---|---|---|---|---|---|---|---|---|
| Cases; n=76 | Controls; n=56 | Odds ratio (95%CI) | P value* | Cases; n=84 | Controls; n=54 | Odds ratio (95%CI) | P value* | |
| TT | 32 (42.1%) | 30 (53.6%) | Reference | – | 31 (36.9%) | 30 (55.6%) | Reference | – |
| TC | 26 (34.2%) | 19 (33.9%) | 1.01 (0.49–2.10) | 0.97 | 33 (39.3%) | 19 (35.2%) | 1.19 (0.59–2.42) | 0.63 |
| CC | 18 (23.7%) | 7 (12.5%) | 2.17 (0.84–5.63) | 0.11 | 20 (23.8%) | 5 (9.3%) | 3.06 (1.07–8.74) | 0.03 |
| T allele | 90 (59.2%) | 79 (69.6%) | Reference | – | 95 (57.6%) | 79 (73.1%) | Reference | – |
| C allele | 62 (40.8%) | 33 (30.4%) | 1.65 (0.98–2.77) | 0.06 | 73 (43.5%) | 29 (26.9%) | 2.09 (1.24–3.53) | 0.005 |
| Glu/Glu | 41 (53.9%) | 32 (57.1%) | Reference | – | 40 (46.6%) | 31 (57.4%) | Reference | – |
| Glu/Asp | 24 (31.6%) | 19 (33.9%) | 0.90 (0.43–1.87) | 0.78 | 35 (41.7%) | 18 (33.3%) | 1.43 (0.70–2.91) | 0.33 |
| Asp/Asp | 11 (14.5%) | 5 (8.9%) | 1.73 (0.56–5.28) | 0.33 | 9 (10.7%) | 5 (9.3%) | 1.18 (0.37–3.72) | 0.78 |
| Glu allele | 106 (69.7%) | 83 (74.1%) | Reference | – | 115 (68.5%) | 80 (74.0%) | Reference | – |
| Asp allele | 46 (30.3%) | 29 (25.9%) | 1.24 (0.72–2.14) | 0.44 | 53 (31.6%) | 28 (26.0%) | 1.32 (0.77–2.26) | 0.32 |
| Intron 4 polymorphism of | ||||||||
| b/b | 53 (69.7%) | 38 (67.9%) | Reference | – | 57 (67.9%) | 32 (59.3%) | Reference | – |
| b/a | 18 (23.7%) | 14 (25.0%) | 0.93 (0.42–2.08) | 0.86 | 23 (27.4%) | 18 (33.3%) | 0.75 (0.36–1.58) | 0.46 |
| a/a | 5 (6.6%) | 4 (7.1%) | 0.92 (0.23–3.58) | 0.90 | 4 (4.8%) | 4 (7.4%) | 0.63 (0.15–2.61) | 0.52 |
| b allele | 124 (81.6%) | 90 (80.3%) | Reference | – | 137 (81.6%) | 82 (75.9%) | Reference | – |
| a allele | 28 (18.4%) | 22 (19.6%) | 0.92 (0.50–1.72) | 0.80 | 31 (18.5%) | 26 (24.1%) | 0.71 (0.40–1.29) | 0.26 |
*Two-tailed chi square (χ2) test significant at <0.05; CI: confidence interval
Nitrite/nitrate (NOX) plasma level (μM) in high-tension primary open-angle glaucoma patients (n=160) and controls (n=110) in Egyptians.
| Parameters | Patients | Controls | P value* | ||||
|---|---|---|---|---|---|---|---|
| Number | NOX level | P value** | Number | NOX level | P value** | ||
| TT | 63 | 26.3±4.2 | 60 | 26.4±4.1 | 0.89 | ||
| TC+CC | 97 | 21.1±3.9 | <0.001 | 50 | 21.8±3.7 | <0.001 | 0.3 |
| Glu/Glu | 81 | 23.6±4.0 | 63 | 24.6±4.1 | 0.14 | ||
| Glu/Asp+Asp/Asp | 79 | 22.7±3.9 | 0.15 | 47 | 23.9±3.9 | 0.37 | 0.1 |
| NOS3 intron 4 polymorphism | |||||||
| b/b | 110 | 23.4±3.9 | 70 | 24.5±4.1 | 0.07 | ||
| b/a+a/a | 50 | 22.6±4.2 | 0.24 | 40 | 24.0±4.1 | 0.54 | 0.12 |
| Total | 160 | 23.1±3.8 | 110 | 24.3±4.1 | 0.01 | ||
* Two-tailed Student t test between patients and controls ** Two-tailed Student t test between genotypes of the same polymorphism.