Literature DB >> 24936681

Beyond fractional anisotropy: extraction of bundle-specific structural metrics from crossing fiber models.

Till W Riffert1, Jan Schreiber1, Alfred Anwander2, Thomas R Knösche3.   

Abstract

Diffusion MRI (dMRI) measurements are used for inferring the microstructural properties of white matter and to reconstruct fiber pathways. Very often voxels contain complex fiber configurations comprising multiple bundles, rendering the simple diffusion tensor model unsuitable. Multi-compartment models deliver a convenient parameterization of the underlying complex fiber architecture, but pose challenges for fitting and model selection. Spherical deconvolution, in contrast, very economically produces a fiber orientation density function (fODF) without any explicit model assumptions. Since, however, the fODF is represented by spherical harmonics, a direct interpretation of the model parameters is impossible. Based on the fact that the fODF can often be interpreted as superposition of multiple peaks, each associated to one relatively coherent fiber population (bundle), we offer a solution that seeks to combine the advantages of both approaches: first the fiber configuration is modeled as fODF represented by spherical harmonics and then each of the peaks is parameterized separately in order to characterize the underlying bundle. In this work, the fODF peaks are approximated by Bingham distributions, capturing first and second-order statistics of the fiber orientations, from which we derive metrics for the parametric quantification of fiber bundles. We propose meaningful relationships between these measures and the underlying microstructural properties. We focus on metrics derived directly from properties of the Bingham distribution, such as peak length, peak direction, peak spread, integral over the peak, as well as a metric derived from the comparison of the largest peaks, which probes the complexity of the underlying microstructure. We compare these metrics to the conventionally used fractional anisotropy (FA) and show how they may help to increase the specificity of the characterization of microstructural properties. While metrics relying on the first moments of the Bingham distributions provide relatively robust results, second-order metrics representing the peak spread are only meaningful, if the SNR is very high and no fiber crossings are present in the voxel.
Copyright © 2014 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Bingham distribution; Diffusion MRI; Fiber orientation density function; Microstructural metrics; Spherical deconvolution

Mesh:

Year:  2014        PMID: 24936681     DOI: 10.1016/j.neuroimage.2014.06.015

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  19 in total

1.  Multi-Tissue Decomposition of Diffusion MRI Signals via Sparse-Group Estimation.

Authors: 
Journal:  IEEE Trans Image Process       Date:  2016-07-07       Impact factor: 10.856

2.  White matter microstructural changes in short-term learning of a continuous visuomotor sequence.

Authors:  Christopher J Steele; Claudine J Gauthier; Stéfanie A Tremblay; Anna-Thekla Jäger; Julia Huck; Chiara Giacosa; Stephanie Beram; Uta Schneider; Sophia Grahl; Arno Villringer; Christine L Tardif; Pierre-Louis Bazin
Journal:  Brain Struct Funct       Date:  2021-04-22       Impact factor: 3.270

3.  Microglial Density Alters Measures of Axonal Integrity and Structural Connectivity.

Authors:  Sue Y Yi; Nicholas A Stowe; Brian R Barnett; Keith Dodd; John-Paul J Yu
Journal:  Biol Psychiatry Cogn Neurosci Neuroimaging       Date:  2020-04-24

4.  Kernel regression estimation of fiber orientation mixtures in diffusion MRI.

Authors:  Ryan P Cabeen; Mark E Bastin; David H Laidlaw
Journal:  Neuroimage       Date:  2015-12-09       Impact factor: 6.556

5.  A multi-shell multi-tissue diffusion study of brain connectivity in early multiple sclerosis.

Authors:  Carmen Tur; Francesco Grussu; Ferran Prados; Thalis Charalambous; Sara Collorone; Baris Kanber; Niamh Cawley; Daniel R Altmann; Sébastien Ourselin; Frederik Barkhof; Jonathan D Clayden; Ahmed T Toosy; Claudia Am Gandini Wheeler-Kingshott; Olga Ciccarelli
Journal:  Mult Scler       Date:  2019-05-10       Impact factor: 6.312

6.  Diffusion Tensor Imaging Group Analysis Using Tract Profiling and Directional Statistics.

Authors:  Mehmet Özer Metin; Didem Gökçay
Journal:  Front Neurosci       Date:  2021-03-22       Impact factor: 4.677

7.  Histological validation of diffusion MRI fiber orientation distributions and dispersion.

Authors:  Kurt G Schilling; Vaibhav Janve; Yurui Gao; Iwona Stepniewska; Bennett A Landman; Adam W Anderson
Journal:  Neuroimage       Date:  2017-10-23       Impact factor: 6.556

8.  Altered white matter microstructure is associated with social cognition and psychotic symptoms in 22q11.2 microdeletion syndrome.

Authors:  Maria Jalbrzikowski; Julio E Villalon-Reina; Katherine H Karlsgodt; Damla Senturk; Carolyn Chow; Paul M Thompson; Carrie E Bearden
Journal:  Front Behav Neurosci       Date:  2014-11-11       Impact factor: 3.558

Review 9.  Recent advancements in diffusion MRI for investigating cortical development after preterm birth-potential and pitfalls.

Authors:  J Dudink; K Pieterman; A Leemans; M Kleinnijenhuis; A M van Cappellen van Walsum; F E Hoebeek
Journal:  Front Hum Neurosci       Date:  2015-01-21       Impact factor: 3.169

10.  Age-Related Differences in White Matter: Understanding Tensor-Based Results Using Fixel-Based Analysis.

Authors:  Shannon Kelley; John Plass; Andrew R Bender; Thad A Polk
Journal:  Cereb Cortex       Date:  2021-07-05       Impact factor: 5.357

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