Literature DB >> 24936526

On the importance of image formation optics in the design of infrared spectroscopic imaging systems.

David Mayerich1, Thomas van Dijk, Michael J Walsh, Matthew V Schulmerich, P Scott Carney, Rohit Bhargava.   

Abstract

Infrared spectroscopic imaging provides micron-scale spatial resolution with molecular contrast. While recent work demonstrates that sample morphology affects the recorded spectrum, considerably less attention has been focused on the effects of the optics, including the condenser and objective. This analysis is extremely important, since it will be possible to understand effects on recorded data and provides insight for reducing optical effects through rigorous microscope design. Here, we present a theoretical description and experimental results that demonstrate the effects of commonly-employed cassegranian optics on recorded spectra. We first combine an explicit model of image formation and a method for quantifying and visualizing the deviations in recorded spectra as a function of microscope optics. We then verify these simulations with measurements obtained from spatially heterogeneous samples. The deviation of the computed spectrum from the ideal case is quantified via a map which we call a deviation map. The deviation map is obtained as a function of optical elements by systematic simulations. Examination of deviation maps demonstrates that the optimal optical configuration for minimal deviation is contrary to prevailing practice in which throughput is maximized for an instrument without a sample. This report should be helpful for understanding recorded spectra as a function of the optics, the analytical limits of recorded data determined by the optical design, and potential routes for optimization of imaging systems.

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Year:  2014        PMID: 24936526      PMCID: PMC4104806          DOI: 10.1039/c3an01687k

Source DB:  PubMed          Journal:  Analyst        ISSN: 0003-2654            Impact factor:   4.616


  18 in total

1.  Analysis of variance in spectroscopic imaging data from human tissues.

Authors:  Jin Tae Kwak; Rohith Reddy; Saurabh Sinha; Rohit Bhargava
Journal:  Anal Chem       Date:  2011-12-28       Impact factor: 6.986

2.  Resonant Mie scattering (RMieS) correction applied to FTIR images of biological tissue samples.

Authors:  Keith R Bambery; Bayden R Wood; Don McNaughton
Journal:  Analyst       Date:  2011-11-10       Impact factor: 4.616

3.  RMieS-EMSC correction for infrared spectra of biological cells: extension using full Mie theory and GPU computing.

Authors:  Paul Bassan; Achim Kohler; Harald Martens; Joe Lee; Edward Jackson; Nicholas Lockyer; Paul Dumas; Michael Brown; Noel Clarke; Peter Gardner
Journal:  J Biophotonics       Date:  2010-08       Impact factor: 3.207

4.  Theory of infrared microspectroscopy for intact fibers.

Authors:  Brynmor J Davis; P Scott Carney; Rohit Bhargava
Journal:  Anal Chem       Date:  2011-01-15       Impact factor: 6.986

5.  The detection and enhancement of latent fingermarks using infrared chemical imaging.

Authors:  Mark Tahtouh; John R Kalman; Claude Roux; Chris Lennard; Brian J Reedy
Journal:  J Forensic Sci       Date:  2005-01       Impact factor: 1.832

6.  Correcting the effect of refraction and dispersion of light in FT-IR spectroscopic imaging in transmission through thick infrared windows.

Authors:  K L Andrew Chan; Sergei G Kazarian
Journal:  Anal Chem       Date:  2012-12-28       Impact factor: 6.986

7.  Aberration-free FTIR spectroscopic imaging of live cells in microfluidic devices.

Authors:  K L Andrew Chan; Sergei G Kazarian
Journal:  Analyst       Date:  2013-03-21       Impact factor: 4.616

8.  Resonant Mie scattering in infrared spectroscopy of biological materials--understanding the 'dispersion artefact'.

Authors:  Paul Bassan; Hugh J Byrne; Franck Bonnier; Joe Lee; Paul Dumas; Peter Gardner
Journal:  Analyst       Date:  2009-06-11       Impact factor: 4.616

Review 9.  Infrared spectroscopic imaging: the next generation.

Authors:  Rohit Bhargava
Journal:  Appl Spectrosc       Date:  2012-10       Impact factor: 2.388

10.  Discrete frequency infrared microspectroscopy and imaging with a tunable quantum cascade laser.

Authors:  Matthew R Kole; Rohith K Reddy; Matthew V Schulmerich; Matthew K Gelber; Rohit Bhargava
Journal:  Anal Chem       Date:  2012-11-19       Impact factor: 6.986

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  10 in total

Review 1.  Infrared Spectroscopic Imaging Advances as an Analytical Technology for Biomedical Sciences.

Authors:  Tomasz P Wrobel; Rohit Bhargava
Journal:  Anal Chem       Date:  2018-02-06       Impact factor: 6.986

2.  Stain-less staining for computed histopathology.

Authors:  David Mayerich; Michael J Walsh; Andre Kadjacsy-Balla; Partha S Ray; Stephen M Hewitt; Rohit Bhargava
Journal:  Technology (Singap World Sci)       Date:  2015-03

3.  Background-Suppressed High-Throughput Mid-Infrared Photothermal Microscopy via Pupil Engineering.

Authors:  Haonan Zong; Celalettin Yurdakul; Yeran Bai; Meng Zhang; M Selim Ünlü; Ji-Xin Cheng
Journal:  ACS Photonics       Date:  2021-10-14       Impact factor: 7.077

4.  Multicolor Discrete Frequency Infrared Spectroscopic Imaging.

Authors:  Kevin Yeh; Dongkwan Lee; Rohit Bhargava
Journal:  Anal Chem       Date:  2019-01-16       Impact factor: 6.986

5.  All-digital histopathology by infrared-optical hybrid microscopy.

Authors:  Martin Schnell; Shachi Mittal; Kianoush Falahkheirkhah; Anirudh Mittal; Kevin Yeh; Seth Kenkel; Andre Kajdacsy-Balla; P Scott Carney; Rohit Bhargava
Journal:  Proc Natl Acad Sci U S A       Date:  2020-02-03       Impact factor: 11.205

6.  The effect of deformation of absorbing scatterers on Mie-type signatures in infrared microspectroscopy.

Authors:  Maren Anna Brandsrud; Reinhold Blümel; Johanne Heitmann Solheim; Achim Kohler
Journal:  Sci Rep       Date:  2021-02-25       Impact factor: 4.379

7.  Multi-functionality Redefined with Colloidal Carotene Carbon Nanoparticles for Synchronized Chemical Imaging, Enriched Cellular Uptake and Therapy.

Authors:  Santosh K Misra; Prabuddha Mukherjee; Huei-Huei Chang; Saumya Tiwari; Mark Gryka; Rohit Bhargava; Dipanjan Pan
Journal:  Sci Rep       Date:  2016-07-11       Impact factor: 4.379

8.  BIM-Sim: Interactive Simulation of Broadband Imaging Using Mie Theory.

Authors:  Sebastian Berisha; Thomas van Dijk; Rohit Bhargava; P Scott Carney; David Mayerich
Journal:  Front Phys       Date:  2017-02-20

9.  Analysis of Fixed and Live Single Cells Using Optical Photothermal Infrared with Concomitant Raman Spectroscopy.

Authors:  Alice Spadea; Joanna Denbigh; M Jayne Lawrence; Mustafa Kansiz; Peter Gardner
Journal:  Anal Chem       Date:  2021-02-17       Impact factor: 6.986

10.  The Use of Constituent Spectra and Weighting in Extended Multiplicative Signal Correction in Infrared Spectroscopy.

Authors:  Johanne Heitmann Solheim; Boris Zimmermann; Valeria Tafintseva; Simona Dzurendová; Volha Shapaval; Achim Kohler
Journal:  Molecules       Date:  2022-03-15       Impact factor: 4.411

  10 in total

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