Literature DB >> 24936030

Domestic dogs and cancer research: a breed-based genomics approach.

Brian W Davis, Elaine A Ostrander.   

Abstract

Domestic dogs are unique from other animal models of cancer in that they generally experience spontaneous disease. In addition, most types of cancer observed in humans are found in dogs, suggesting that canines may be an informative system for the study of cancer genetics. Domestic dogs are divided into over 175 breeds, with members of each breed sharing significant phenotypes. The breed barrier enhances the utility of the model, especially for genetic studies where small numbers of genes are hypothesized to account for the breed cancer susceptibility. These facts, combined with recent advances in high-throughput sequencing technologies allows for an unrivaled ability to use pet dog populations to find often subtle mutations that promote cancer susceptibility and progression in dogs as a whole. The meticulous record keeping associated with dog breeding makes the model still more powerful, as it facilitates both association analysis and family-based linkage studies. Key to the success of these studies is their cooperative nature, with owners, scientists, veterinarians and breed clubs working together to avoid the cost and unpopularity of developing captive populations. In this article we explore these principals and advocate for colony-free, genetic studies that will enhance our ability to diagnose and treat cancer in dogs and humans alike. Published by Oxford University Press 2014. This work is written by (a) US Government employee(s) and is in the public domain in the US.

Entities:  

Keywords:  RNA-seq; canine cancer; chip-seq, dog colony; exome; histiocytic sarcoma; osteosarcoma; squamous cell carcinoma of the digit; transitional cell carcinoma; tumor sequencing; whole genome

Mesh:

Year:  2014        PMID: 24936030      PMCID: PMC4158346          DOI: 10.1093/ilar/ilu017

Source DB:  PubMed          Journal:  ILAR J        ISSN: 1084-2020


  90 in total

1.  Data from the Danish veterinary cancer registry on the occurrence and distribution of neoplasms in dogs in Denmark.

Authors:  L B Brønden; S S Nielsen; N Toft; A T Kristensen
Journal:  Vet Rec       Date:  2010-05-08       Impact factor: 2.695

Review 2.  Cross talk from pets to people: translational osteosarcoma treatments.

Authors:  Stephen J Withrow; Ross M Wilkins
Journal:  ILAR J       Date:  2010

Review 3.  Dog models of naturally occurring cancer.

Authors:  Jennie L Rowell; Donna O McCarthy; Carlos E Alvarez
Journal:  Trends Mol Med       Date:  2011-03-24       Impact factor: 11.951

4.  Breed relationships facilitate fine-mapping studies: a 7.8-kb deletion cosegregates with Collie eye anomaly across multiple dog breeds.

Authors:  Heidi G Parker; Anna V Kukekova; Dayna T Akey; Orly Goldstein; Ewen F Kirkness; Kathleen C Baysac; Dana S Mosher; Gustavo D Aguirre; Gregory M Acland; Elaine A Ostrander
Journal:  Genome Res       Date:  2007-10-04       Impact factor: 9.043

5.  A population study of neutering status as a risk factor for canine prostate cancer.

Authors:  Jeffrey N Bryan; Matthew R Keeler; Carolyn J Henry; Margaret E Bryan; Allen W Hahn; Charles W Caldwell
Journal:  Prostate       Date:  2007-08-01       Impact factor: 4.104

Review 6.  RNA-Seq: a revolutionary tool for transcriptomics.

Authors:  Zhong Wang; Mark Gerstein; Michael Snyder
Journal:  Nat Rev Genet       Date:  2009-01       Impact factor: 53.242

7.  Variation in age at death of dogs of different sexes and breeds.

Authors:  R T Bronson
Journal:  Am J Vet Res       Date:  1982-11       Impact factor: 1.156

8.  Neutering dogs: effects on joint disorders and cancers in golden retrievers.

Authors:  Gretel Torres de la Riva; Benjamin L Hart; Thomas B Farver; Anita M Oberbauer; Locksley L McV Messam; Neil Willits; Lynette A Hart
Journal:  PLoS One       Date:  2013-02-13       Impact factor: 3.240

9.  Transcriptome sequencing across a prostate cancer cohort identifies PCAT-1, an unannotated lincRNA implicated in disease progression.

Authors:  John R Prensner; Matthew K Iyer; O Alejandro Balbin; Saravana M Dhanasekaran; Qi Cao; J Chad Brenner; Bharathi Laxman; Irfan A Asangani; Catherine S Grasso; Hal D Kominsky; Xuhong Cao; Xiaojun Jing; Xiaoju Wang; Javed Siddiqui; John T Wei; Daniel Robinson; Hari K Iyer; Nallasivam Palanisamy; Christopher A Maher; Arul M Chinnaiyan
Journal:  Nat Biotechnol       Date:  2011-07-31       Impact factor: 54.908

10.  Transcriptome sequencing to detect gene fusions in cancer.

Authors:  Christopher A Maher; Chandan Kumar-Sinha; Xuhong Cao; Shanker Kalyana-Sundaram; Bo Han; Xiaojun Jing; Lee Sam; Terrence Barrette; Nallasivam Palanisamy; Arul M Chinnaiyan
Journal:  Nature       Date:  2009-01-11       Impact factor: 49.962

View more
  38 in total

Review 1.  Dissecting evolution and disease using comparative vertebrate genomics.

Authors:  Jennifer R S Meadows; Kerstin Lindblad-Toh
Journal:  Nat Rev Genet       Date:  2017-07-24       Impact factor: 53.242

Review 2.  Demographic history, selection and functional diversity of the canine genome.

Authors:  Elaine A Ostrander; Robert K Wayne; Adam H Freedman; Brian W Davis
Journal:  Nat Rev Genet       Date:  2017-09-25       Impact factor: 53.242

3.  A PIECE OF MY MIND. A Wild Rotation.

Authors:  Gilad D Evrony
Journal:  JAMA       Date:  2016-08-16       Impact factor: 56.272

Review 4.  Peto's paradox and the hallmarks of cancer: constructing an evolutionary framework for understanding the incidence of cancer.

Authors:  L Nunney; B Muir
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2015-07-19       Impact factor: 6.237

Review 5.  Comparative oncology: what dogs and other species can teach us about humans with cancer.

Authors:  Joshua D Schiffman; Matthew Breen
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2015-07-19       Impact factor: 6.237

Review 6.  Beyond tradition and convention: benefits of non-traditional model organisms in cancer research.

Authors:  Rebecca M Harman; Sanjna P Das; Arianna P Bartlett; Gat Rauner; Leanne R Donahue; Gerlinde R Van de Walle
Journal:  Cancer Metastasis Rev       Date:  2020-10-28       Impact factor: 9.264

Review 7.  RNA sequencing as a powerful tool in searching for genes influencing health and performance traits of horses.

Authors:  Monika Stefaniuk; Katarzyna Ropka-Molik
Journal:  J Appl Genet       Date:  2015-10-07       Impact factor: 3.240

8.  Multi-omics approach identifies germline regulatory variants associated with hematopoietic malignancies in retriever dog breeds.

Authors:  Jacquelyn M Evans; Heidi G Parker; Gerard R Rutteman; Jocelyn Plassais; Guy C M Grinwis; Alexander C Harris; Susan E Lana; Elaine A Ostrander
Journal:  PLoS Genet       Date:  2021-05-13       Impact factor: 5.917

9.  Treatment of canine and feline sarcoma using MR-guided focused ultrasound system.

Authors:  Anastasia Antoniou; Nikolas Evripidou; Stelios Panayiotou; Kyriakos Spanoudes; Christakis Damianou
Journal:  J Ultrasound       Date:  2022-03-12

Review 10.  The role of COX expression in the prognostication of overall survival of canine and feline cancer: A systematic review.

Authors:  Hugo Gregório; Tomás R Magalhães; Isabel Pires; Justina Prada; Maria I Carvalho; Felisbina L Queiroga
Journal:  Vet Med Sci       Date:  2021-03-10
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.