Literature DB >> 24923990

Emerging mechanisms of mRNP remodeling regulation.

Chyi-Ying A Chen1, Ann-Bin Shyu.   

Abstract

The assembly and remodeling of the components of messenger ribonucleoprotein particles (mRNPs) are important in determining the fate of a messenger RNA (mRNA). A combination of biochemical and cell biology research, recently complemented by genome-wide high-throughput approaches, has led to significant progress on understanding the formation, dynamics, and function of mRNPs. These studies also advanced the challenging process of identifying the evolving constituents of individual mRNPs at various stages during an mRNA's lifetime. While research on mRNP remodeling in general has been gaining momentum, there has been relatively little attention paid to the regulatory aspect of mRNP remodeling. Here, we discuss the results of some new studies and potential mechanisms for regulation of mRNP remodeling.
© 2014 John Wiley & Sons, Ltd.

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Year:  2014        PMID: 24923990      PMCID: PMC4323169          DOI: 10.1002/wrna.1241

Source DB:  PubMed          Journal:  Wiley Interdiscip Rev RNA        ISSN: 1757-7004            Impact factor:   9.957


  91 in total

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Journal:  EMBO J       Date:  2000-02-01       Impact factor: 11.598

Review 2.  Integrated analytical strategies for the study of phosphorylation and glycosylation in proteins.

Authors:  Caterina Temporini; Enrica Calleri; Gabriella Massolini; Gabriele Caccialanza
Journal:  Mass Spectrom Rev       Date:  2008 May-Jun       Impact factor: 10.946

Review 3.  Keeping mRNPs in check during assembly and nuclear export.

Authors:  Evelina Tutucci; Françoise Stutz
Journal:  Nat Rev Mol Cell Biol       Date:  2011-06       Impact factor: 94.444

Review 4.  How cells get the message: dynamic assembly and function of mRNA-protein complexes.

Authors:  Michaela Müller-McNicoll; Karla M Neugebauer
Journal:  Nat Rev Genet       Date:  2013-03-12       Impact factor: 53.242

5.  Complexity of the structure of particles containing heterogeneous nuclear RNA as demonstrated by ribonuclease treatment.

Authors:  J Stevenin; H Gallinaro-Matringe; R Gattoni; M Jacob
Journal:  Eur J Biochem       Date:  1977-04-15

6.  Insights into RNA biology from an atlas of mammalian mRNA-binding proteins.

Authors:  Alfredo Castello; Bernd Fischer; Katrin Eichelbaum; Rastislav Horos; Benedikt M Beckmann; Claudia Strein; Norman E Davey; David T Humphreys; Thomas Preiss; Lars M Steinmetz; Jeroen Krijgsveld; Matthias W Hentze
Journal:  Cell       Date:  2012-05-31       Impact factor: 41.582

7.  Large-scale Arabidopsis phosphoproteome profiling reveals novel chloroplast kinase substrates and phosphorylation networks.

Authors:  Sonja Reiland; Gaëlle Messerli; Katja Baerenfaller; Bertran Gerrits; Anne Endler; Jonas Grossmann; Wilhelm Gruissem; Sacha Baginsky
Journal:  Plant Physiol       Date:  2009-04-17       Impact factor: 8.340

8.  Cdc6 stability is regulated by the Huwe1 ubiquitin ligase after DNA damage.

Authors:  Jonathan R Hall; Evelyn Kow; Kathleen R Nevis; Chiajung Karen Lu; K Scott Luce; Qing Zhong; Jeanette Gowen Cook
Journal:  Mol Biol Cell       Date:  2007-06-13       Impact factor: 4.138

9.  Global analysis of yeast mRNPs.

Authors:  Sarah F Mitchell; Saumya Jain; Meipei She; Roy Parker
Journal:  Nat Struct Mol Biol       Date:  2012-12-09       Impact factor: 15.369

Review 10.  Molecular control of the NEMO family of ubiquitin-binding proteins.

Authors:  Kristopher Clark; Sambit Nanda; Philip Cohen
Journal:  Nat Rev Mol Cell Biol       Date:  2013-08-29       Impact factor: 94.444

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  11 in total

Review 1.  Regulation of RNA binding proteins in trypanosomatid protozoan parasites.

Authors:  María Albertina Romaniuk; Gabriela Cervini; Alejandro Cassola
Journal:  World J Biol Chem       Date:  2016-02-26

Review 2.  A brave new world of RNA-binding proteins.

Authors:  Matthias W Hentze; Alfredo Castello; Thomas Schwarzl; Thomas Preiss
Journal:  Nat Rev Mol Cell Biol       Date:  2018-01-17       Impact factor: 94.444

Review 3.  Roles of Prolyl Isomerases in RNA-Mediated Gene Expression.

Authors:  Roopa Thapar
Journal:  Biomolecules       Date:  2015-05-18

Review 4.  Regulation of AU-Rich Element RNA Binding Proteins by Phosphorylation and the Prolyl Isomerase Pin1.

Authors:  Zhong-Jian Shen; James S Malter
Journal:  Biomolecules       Date:  2015-04-14

5.  Y-box protein-associated acidic protein (YBAP1/C1QBP) affects the localization and cytoplasmic functions of YB-1.

Authors:  Ken Matsumoto; Shingo Kose; Iku Kuwahara; Mami Yoshimura; Naoko Imamoto; Minoru Yoshida
Journal:  Sci Rep       Date:  2018-04-18       Impact factor: 4.379

Review 6.  Emerging Evidence of Translational Control by AU-Rich Element-Binding Proteins.

Authors:  Hiroshi Otsuka; Akira Fukao; Yoshinori Funakami; Kent E Duncan; Toshinobu Fujiwara
Journal:  Front Genet       Date:  2019-05-02       Impact factor: 4.599

7.  Recruitment, Duplex Unwinding and Protein-Mediated Inhibition of the Dead-Box RNA Helicase Dbp2 at Actively Transcribed Chromatin.

Authors:  Wai Kit Ma; Bishnu P Paudel; Zheng Xing; Ivan G Sabath; David Rueda; Elizabeth J Tran
Journal:  J Mol Biol       Date:  2016-02-11       Impact factor: 5.469

8.  The Cardiomyocyte RNA-Binding Proteome: Links to Intermediary Metabolism and Heart Disease.

Authors:  Yalin Liao; Alfredo Castello; Bernd Fischer; Stefan Leicht; Sophia Föehr; Christian K Frese; Chikako Ragan; Sebastian Kurscheid; Eloisa Pagler; Hao Yang; Jeroen Krijgsveld; Matthias W Hentze; Thomas Preiss
Journal:  Cell Rep       Date:  2016-07-21       Impact factor: 9.423

9.  Oxidative Stress Causes Enhanced Secretion of YB-1 Protein that Restrains Proliferation of Receiving Cells.

Authors:  Andrea Maria Guarino; Annaelena Troiano; Elio Pizzo; Andrea Bosso; Maria Vivo; Gabriella Pinto; Angela Amoresano; Alessandra Pollice; Girolama La Mantia; Viola Calabrò
Journal:  Genes (Basel)       Date:  2018-10-22       Impact factor: 4.096

10.  System-wide Profiling of RNA-Binding Proteins Uncovers Key Regulators of Virus Infection.

Authors:  Manuel Garcia-Moreno; Marko Noerenberg; Shuai Ni; Aino I Järvelin; Esther González-Almela; Caroline E Lenz; Marcel Bach-Pages; Victoria Cox; Rosario Avolio; Thomas Davis; Svenja Hester; Thibault J M Sohier; Bingnan Li; Gregory Heikel; Gracjan Michlewski; Miguel A Sanz; Luis Carrasco; Emiliano P Ricci; Vicent Pelechano; Ilan Davis; Bernd Fischer; Shabaz Mohammed; Alfredo Castello
Journal:  Mol Cell       Date:  2019-02-21       Impact factor: 17.970

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