| Literature DB >> 24922520 |
Baoping Guo1, Hong Cen1, Xiaohong Tan1, Wenjian Liu1, Qing Ke1.
Abstract
BACKGROUND: The prognostic value of the copy number (GCN) and protein expression of the mesenchymal-epithelial transition (MET) gene for survival of patients with non-small cell lung cancer (NSCLC) remains controversial. This study aims to comprehensively and quantitatively asses the suitability of MET GCN and protein expression to predict patients' survival.Entities:
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Year: 2014 PMID: 24922520 PMCID: PMC4055667 DOI: 10.1371/journal.pone.0099399
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Figure 1Flow chart of the strategy used for the selection of reports used in our analysis.
MET, mesenchymal-epithelial transition; GCN, gene copy number.
Evaluation of human mesenchymal-epithelial transition (MET) gene copy number in the selected studies.
| First author | Year | Country | Inclusion period | No. of Patients (Male/Female) | Age in years | Stage | Method | Cut-off | Histology | No. of patients with high MET | Follow-up (month) | Survival analysis/HR | Adjusted founders |
| Sun | 2013 | China | 2004–2008 | 61(47/14) | Mean 58.7 range 32–75 | I–IV | RT-PCR | >3 copies | NSCLC | 11 (18%) | Mean 29.6±14.7 | R (U,M) | TNM stage, MET expression |
| Dziadziuszko | 2012 | USA | NA | 189(144/45) | Mean 64 range 37–85 | I–IV | SISH | Cappuzzo system | NSCLC | 14 (10%) | Median 5.3 y; range 1.1–6.9 y | R (U,M) | Demographic and clinical features |
| Park | 2012 | Korea | Sep.1994- Dem.2001 | 380(308/72) | Mean 62 range 54–67 | I–IV | FISH | Cappuzzo system or the UCCC criteria | NSCLC | 42 (11.1%); 27(7%) | Mean 42.2; range 1–167 | R (U,M) | Age, sex, smoking, histology, stage, MET IHC, EGFR IHC, and EGFR FISH |
| Tanaka | 2012 | Japan | 2004–2009 | 138(69/69) | NA | I–IV | FISH | Cappuzzo system | ADC | 21 (15%); 6 (4%) | ≥5 years | E(U) | - |
| Tsuta | 2012 | Japan | 1997–2007 | 844(532/312) | Mean 61.7 range 30–88 | I–IV | BISH | UCCC criteria | NSCLC | 92 (10.9%) | Median 53.3; range 0.3–150 | R (U) | - |
| Tachibana | 2012 | Japan | 2001–2008 | 106(51/55) | Median 64 range 31–89 | I–III | FISH | >3 copies | ADC | 11(10.4%) | Median 50; range 5–99 | R (U,M) | Pleural or vascular invasion, lymphatic permeation, nuclear grading, immunoreactivity for MET and HGF |
| Chen | 2011 | Taiwan | Jan.1996- May 2004 | 208(128/80) | Median 65 | I–IV | FISH | MET gene copies ≥3 | NSCLC | 22 (10.58%) | Range 27days-158 months | R (U,M) | Age, sex, smoking, histology, stage, EGFR copy, EGFR and KRAS mutations |
| Onitsuka | 2010 | Japan | 2003–2007 | 183(102/81) | Mean 68.5 range 23–88 | IA–IIIB | RT-PCR | ≥1.31 copies | ADC | 8 (4%) | Median 34.2; range 1.0–70.0 | R (U,M) | Sex, age, stage, EGFR and KRAS mutations, p-MET, HGF expression |
| Go | 2010 | Korea | Jan.1995- Jan.2000 | 97(90/7) | Median 60 range 28–81 | I–IV | FISH | Cappuzzo system or the UCCC criteria | SCC | 12 (6.7%) | Median 56; range 1–121 | R (U,M) | Age, sex, smoking, stage, EGFR FISH |
| Cappuzzo | 2009 | Italy | 2000–2004 | 447(373/74) | Median 66 range 33–86 | I–IV | FISH | Cappuzzo system | NSCLC | 48 (11.1%) | Median 43.9 | R (U,M) | Sex, smoking, histology, stage, grade, EGFR FISH |
| Okuda | 2008 | Japan | 1997–2007 | 213(148/65) | Median 66 range 33–88 | I–IV | RT-PCR | >3 copies | NSCLC | 12 (5.6%) | ≥5 years | E (U), R(M) | Age, sex, smoking, histology, stage, differentiation, EGFR mutations |
NA: not available; NSCLC, non-small cell lung cancer; ADC, adenocarcinoma; SCC, squamous cell carcinoma; RT-PCR, real-time polymerase chain reaction; FISH, fluorescent in situ hybridization; SISH, silver in situ hybridization; BISH, bright-field in situ hybridization; IHC, immunohistochemistry; Cappuzzo scoring system: MET FISH-positive group was defined mean MET gene copy number≥5 copies per cell; UCCC criteria: the University of Colorado Cancer Center) criteria, MET gene status was classified into two groups according to the frequency of tumor cells with specific copy numbers of the MET gene and the chromosome 7 centromere: FISH-positive MET MET to CEP7 ratio ≥2; >15 copies of the MET signals in >10% of tumor cells; small gene cluster [4–10 copies]; or innumerable tight gene clusters in >10% the tumor cells); EGFR, epidermal growth factor receptor; HR: hazard ratio, obtained by estimated (E) or reported in text (R). “M” means the HR come from multivariate analysis, and “U” means HR come from univariate analysis.
Evaluation of human mesenchymal-epithelial transition (MET) by immunohistochemistry (IHC) in the selected studies in the selected studies.
| First author | Year | Country | Inclusion period | No. of Patients(Male/Female) | Age in years | Histology | Stage | Method | Specimen | Cut-off | Antibody | No. of patients with high MET | Follow-up (month) | Survival analysis/HR | Co-founders | Blinding of MET evaluation |
| Sun | 2013 | China | 2004–2008 | 61(47/14) | Mean 58.7 range 32–75 | NSCLC | I–IV | IHC | Paraffin | > 3 score | Rabbit polyclonal; Santa Cruz, CA | 36 (59%) | Mean 29.6±14.7 | R (U,M) | TNM stage, MET expression | NA |
| Dziadziuszko | 2012 | USA | NA | 189(144/45) | Mean 64 range 37–85 | NSCLC | I–IV | IHC | Paraffin | Median score 60; range (0–400) | catalog # 7904430, rabbit monoclonal antibody; Tucson, AZ | 83 (44%) | Median 5.3 y; range 1.1–6.9 y | R (U) | - | NA |
| Tsuta | 2012 | Japan | 1997–2007 | 883(563/320) | Mean:61.7; range:30–88 | NSCLC | I–IV | IHC | Paraffin | ≥10% | Clone SP44; Ventana | 196 (22.2%) | Median 53.3; range 0.3–150 | R (U) | - | NA |
| Tachibana | 2012 | Japan | 2001–2008 | 106(51/55) | Median 64 range 31–89 | ADC | I–III | IHC | Paraffin | ≥40% tumor cells | Rabbit polyclonal, Gumma, Japan | 30 (28%) | Median 50; range 5–99 | R (U) | - | Yes |
| Park | 2012 | Korea | Sep.1994– Dem.2001 | 380(308/72) | Mean 62 range 54–67 | NSCLC | I–IV | IHC | Paraffin | 4 to 12 score | 3D4, rabbit polyclonal, 1:100; San Francisco, CA | 52 (13.7%) | Mean 42.2; range 1–167 | R (U,M) | Age, sex, smoking, histology, stage, MET IHC, EGFR IHC, and EGFR FISH | Yes |
| Hu | 2012 | China | Jan.2003– Jan.2006 | 103(77/26) | Median: 60 | NSCLC | I–III | IHC | Paraffin | ≥3 score | Rabbit polyclonal, China | 71 (68.9%) | Range: 4–60 | R (M) | Differentiation, T stages, Lymphatic metastasis,TNM stages, MACC1 | Yes |
| Onitsuka | 2010 | Japan | 2003–2007 | 183(102/81) | Mean 68.5 range 23–88 | ADC | IA–IIIB | IHC | Paraffin | 3 to 8 score | sc-7949, rabbit polyclonal, 1:100; Santa Cruz, CA | 104 (57%) | Median 34.2; range 1.0–70.0 | R (U,M) | Sex, age, stage, EGFR and KRAS mutations, p-MET, HGF expression | Yes |
| Liu | 2010 | China | Mar.2001– Mar.2004 | 98(62/36) | Median 56 range 25–73 | NSCLC | I–IV | IHC | Paraffin | ≥25% | Rabbit polyclonal, China | 62 (63.3%) | Median 46; range 8–69 | R (M) | Stage | Yes |
| Ruiz | 2009 | USA | NA | 178 (127/51) | NA | NSCLC | I–III | IHC | Paraffin | Score >5 | NA | 72(40%) | ≥5 years | R (M) | Stage, KARS mutation, Type of resection, EGFR. | Yes |
| Nakamura | 2007 | Japan | 1999–2003 | 130(82/48) | Mean:65.4; range:36–81 | ADC | IA–IIIB | IHC | Paraffin | ≥2+ | Rabbit polyclonal, Gumma, Japan | 47 (36.1%) | Median 31.4; range 0.8–57.3 | E (U) | - | Yes |
| Masuya | 2004 | Japan | Jan.1993- Mar.2001 | 88 | - | NSCLC | I–IIIB | IHC | Paraffin | Staining intensity≥1 grade | SC-10, rabbit polyclonal, 1:100; Santa Cruz, CA | 36 (41%) | Mean: 49.8±36.1 | R (U) | - | Yes |
| Tokunou | 2001 | Japan | 1984–1993 | 131 (73/58) | Median 59 range 26–80 | ADC | I–IV | IHC | Paraffin | More than one microscopic area | Rabbit polyclonal, no. 18321,Gumma, Japan | 69 (53%) | Median 5.7 y; range 0.6–12 y | R (U,M) | Stage, nodal involvement, vascular invasion, lymphatic invasion | NA |
| Takanami | 1996 | Japan | 1982–1989 | 120 (69/51) | Mean:61; range:28–81 | ADC | I–IV | IHC | Paraffin | ≥2+ | C-28, rabbit polyclonal, 1:50; Santa Cruz, CA | 56 (47%) | ≥5 years | R (M) | Stage, HGF expression | Yes |
NA: not available; NSCLC, non-small cell lung cancer; ADC, adenocarcinoma; IHC, immunohistochemistry; HR: hazard ratio, obtained by estimated (E) or reported in text (R). “M” means the HR come from multivariate analysis, and “U” means HR come from univariate analysis; EGFR, epidermal growth factor receptor; HGF, hepatocyte growth factor.
Figure 2Meta-analysis of effects of the MET gene copy number on overall survival of patients with non-small cell lung cancer (NSCLC).
Forest plot showing (A) the combined relative HR for OS by univariate analysis; (B) the combined relative HR for OS by multivariate analysis.
Figure 3Forest plot (A) assessing MET gene copy number in NSCLC stratified by histological subtypes; Forest plot (B) assessing MET gene copy number in NSCLC stratified by ethnic source.
Main meta-analysis results.
| Random-effects model | Fixed-effects model | Heterogeneity | |||||
| Analysis (overall survival) |
| HR (95% CI) |
| HR (95% CI) |
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| Univariate analysis | 11 | 1.90(1.35–2.68) | <0.001 | 1.73(1.42–2.11) | <0.001 | 58% | 0.008 |
| All studies except Sun, Dziadziuszko | 9 | 1.74(1.40–2.15) | <0.001 | 1.73(1.40–2.13) | <0.001 | 4.2% | 0.400 |
| Multivariable analysis | 9 | 1.61(1.15–2.25) | 0.005 | 1.21(1.05–1.40) | 0.008 | 71.50% | <0.001 |
| All studies except Sun, Dziadziuszko | 7 | 1.53(1.26–1.87) | <0.001 | 1.53(1.26–1.87) | <0.001 | 0.00% | 0.488 |
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| Univariate analysis | 9 | 1.52(1.08–2.15) | 0.017 | 1.25(1.07–1.45) | 0.004 | 75.80% | <0.001 |
| All studies except Tsuta | 7 | 1.84(1.45–2.33) | <0.001 | 1.78(1.45–2.18) | <0.001 | 15.20% | 0.314 |
| Multivariable analysis | 8 | 2.18(1.60–2.97) | <0.001 | 1.98(1.64–2.38) | <0.001 | 57.50% | 0.021 |
| All studies except Onitsuka, Liu | 6 | 2.07(1.52–2.81) | <0.001 | 2.00(1.55–2.57) | <0.001 | 25.90% | 0.24 |
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| FISH (include BISH and SISH) | 8 | 1.66(1.28–2.16) | <0.001 | 1.65(1.33–2.04) | <0.001 | 19.1% | 0.154 |
| RT-PCR | 3 | 2.95(0.80–10.91) | 0.106 | 2.20(1.37–3.55) | 0.001 | 85.7% | 0.001 |
| IHC | 13 | 1.76(1.28–2.42) | <0.001 | 1.42(1.24–1.63) | <0.001 | 78.5% | <0.001 |
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| MET gene copy number | |||||||
| NSCLC | 7 | 1.89(1.26–2.84) | 0.002 | 1.73(1.39–2.14) | <0.001 | 66.60% | 0.008 |
| ADC | 5 | 1.49(1.05–2.10) | 0.025 | 1.48(1.12–1.97) | 0.006 | 12.50% | 0.334 |
| SCC | 2 | 1.64 (0.58–4.60) | 0.35 | 1.51(0.88–2.61) | 0.137 | 70.70% | 0.065 |
| MET protein expression | |||||||
| NSCLC | 8 | 1.72(1.10–2.69) | 0.017 | 1.33(1.14–1.56) | <0.001 | 85% | <0.001 |
| ADC | 5 | 1.69(1.31–2.19) | <0.001 | 1.69(1.31–2.19) | <0.001 | 0% | 0.441 |
| SCC | - | - | - | - | - | - | - |
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| MET gene copy number | |||||||
| Asian | 9 | 2.22(1.46–3.38) | <0.001 | 1.90 (1.49–2.43) | <0.001 | 57.10% | 0.017 |
| Non-Asian | 2 | 1.21(0.55–2.67) | 0.630 | 1.33 (0.98–1.81) | 0.054 | 64.20% | 0.037 |
| MET protein expression | |||||||
| Asian | 11 | 1.89(1.34–2.68) | <0.001 | 1.52(1.31–1.77) | <0.001 | 76.60% | <0.001 |
| Non-Asian | 2 | 1.28(0.48–3.43) | 0.623 | 1.08(0.80–1.47) | 0.603 | 89.10% | 0.002 |
N: number of studies; HR: hazard ratio; RT-PCR, real-time polymerase chain reaction; FISH, fluorescent in situ hybridization; SISH, silver in situ hybridization; BISH, bright-field in situ hybridization; IHC, immunohistochemistry; NSCLC, non-small cell lung cancer; ADC, adenocarcinoma; SCC, squamous cell carcinoma; EGFR, epidermal growth factor receptor; WT, wild type.
Figure 4Meta-analysis that according to different methods of MET detection used.
Figure 5Meta-analysis of effects of the MET protein expression on overall survival of patients with NSCLC.
Forest plot showing (A) the combined relative HR for OS by univariate analysis; (B) the combined relative HR for OS by multivariate analysis.
Figure 6Forest plot (A) assessing MET protein expression in NSCLC stratified by histological subtypes; Forest plot (B) assessing MET protein expression in NSCLC stratified by ethnic source.