Literature DB >> 24905779

Molecular robots with sensors and intelligence.

Masami Hagiya1, Akihiko Konagaya, Satoshi Kobayashi, Hirohide Saito, Satoshi Murata.   

Abstract

CONSPECTUS: What we can call a molecular robot is a set of molecular devices such as sensors, logic gates, and actuators integrated into a consistent system. The molecular robot is supposed to react autonomously to its environment by receiving molecular signals and making decisions by molecular computation. Building such a system has long been a dream of scientists; however, despite extensive efforts, systems having all three functions (sensing, computation, and actuation) have not been realized yet. This Account introduces an ongoing research project that focuses on the development of molecular robotics funded by MEXT (Ministry of Education, Culture, Sports, Science and Technology, Japan). This 5 year project started in July 2012 and is titled "Development of Molecular Robots Equipped with Sensors and Intelligence". The major issues in the field of molecular robotics all correspond to a feedback (i.e., plan-do-see) cycle of a robotic system. More specifically, these issues are (1) developing molecular sensors capable of handling a wide array of signals, (2) developing amplification methods of signals to drive molecular computing devices, (3) accelerating molecular computing, (4) developing actuators that are controllable by molecular computers, and (5) providing bodies of molecular robots encapsulating the above molecular devices, which implement the conformational changes and locomotion of the robots. In this Account, the latest contributions to the project are reported. There are four research teams in the project that specialize on sensing, intelligence, amoeba-like actuation, and slime-like actuation, respectively. The molecular sensor team is focusing on the development of molecular sensors that can handle a variety of signals. This team is also investigating methods to amplify signals from the molecular sensors. The molecular intelligence team is developing molecular computers and is currently focusing on a new photochemical technology for accelerating DNA-based computations. They also introduce novel computational models behind various kinds of molecular computers necessary for designing such computers. The amoeba robot team aims at constructing amoeba-like robots. The team is trying to incorporate motor proteins, including kinesin and microtubules (MTs), for use as actuators implemented in a liposomal compartment as a robot body. They are also developing a methodology to link DNA-based computation and molecular motor control. The slime robot team focuses on the development of slime-like robots. The team is evaluating various gels, including DNA gel and BZ gel, for use as actuators, as well as the body material to disperse various molecular devices in it. They also try to control the gel actuators by DNA signals coming from molecular computers.

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Year:  2014        PMID: 24905779     DOI: 10.1021/ar400318d

Source DB:  PubMed          Journal:  Acc Chem Res        ISSN: 0001-4842            Impact factor:   22.384


  28 in total

Review 1.  Synchronous operation of biomolecular engines.

Authors:  Jakia Jannat Keya; Arif Md Rashedul Kabir; Akira Kakugo
Journal:  Biophys Rev       Date:  2020-03-03

2.  DNA nanotechnology for nucleic acid analysis: multifunctional molecular DNA machine for RNA detection.

Authors:  A J Cox; H N Bengtson; K H Rohde; D M Kolpashchikov
Journal:  Chem Commun (Camb)       Date:  2016-12-06       Impact factor: 6.222

Review 3.  Non-equilibrium assembly of microtubules: from molecules to autonomous chemical robots.

Authors:  H Hess; Jennifer L Ross
Journal:  Chem Soc Rev       Date:  2017-09-18       Impact factor: 54.564

4.  A survey of advancements in nucleic acid-based logic gates and computing for applications in biotechnology and biomedicine.

Authors:  Cuichen Wu; Shuo Wan; Weijia Hou; Liqin Zhang; Jiehua Xu; Cheng Cui; Yanyue Wang; Jun Hu; Weihong Tan
Journal:  Chem Commun (Camb)       Date:  2015-03-04       Impact factor: 6.222

5.  Logic Gate Operation by DNA Translocation through Biological Nanopores.

Authors:  Hiroki Yasuga; Ryuji Kawano; Masahiro Takinoue; Yutaro Tsuji; Toshihisa Osaki; Koki Kamiya; Norihisa Miki; Shoji Takeuchi
Journal:  PLoS One       Date:  2016-02-18       Impact factor: 3.240

6.  Pulse-density modulation control of chemical oscillation far from equilibrium in a droplet open-reactor system.

Authors:  Haruka Sugiura; Manami Ito; Tomoya Okuaki; Yoshihito Mori; Hiroyuki Kitahata; Masahiro Takinoue
Journal:  Nat Commun       Date:  2016-01-20       Impact factor: 14.919

7.  Complex-shaped three-dimensional multi-compartmental microparticles generated by diffusional and Marangoni microflows in centrifugally discharged droplets.

Authors:  Masayuki Hayakawa; Hiroaki Onoe; Ken H Nagai; Masahiro Takinoue
Journal:  Sci Rep       Date:  2016-02-10       Impact factor: 4.379

8.  Protein-driven RNA nanostructured devices that function in vitro and control mammalian cell fate.

Authors:  Tomonori Shibata; Yoshihiko Fujita; Hirohisa Ohno; Yuki Suzuki; Karin Hayashi; Kaoru R Komatsu; Shunsuke Kawasaki; Kumi Hidaka; Shin Yonehara; Hiroshi Sugiyama; Masayuki Endo; Hirohide Saito
Journal:  Nat Commun       Date:  2017-09-14       Impact factor: 14.919

9.  Deformable Self-Propelled Micro-Object Comprising Underwater Oil Droplets.

Authors:  Taisuke Banno; Arisa Asami; Naoko Ueno; Hiroyuki Kitahata; Yuki Koyano; Kouichi Asakura; Taro Toyota
Journal:  Sci Rep       Date:  2016-08-09       Impact factor: 4.379

10.  DNA-assisted swarm control in a biomolecular motor system.

Authors:  Jakia Jannat Keya; Ryuhei Suzuki; Arif Md Rashedul Kabir; Daisuke Inoue; Hiroyuki Asanuma; Kazuki Sada; Henry Hess; Akinori Kuzuya; Akira Kakugo
Journal:  Nat Commun       Date:  2018-01-31       Impact factor: 14.919

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