Literature DB >> 28329028

Non-equilibrium assembly of microtubules: from molecules to autonomous chemical robots.

H Hess1, Jennifer L Ross.   

Abstract

Biological systems have evolved to harness non-equilibrium processes from the molecular to the macro scale. It is currently a grand challenge of chemistry, materials science, and engineering to understand and mimic biological systems that have the ability to autonomously sense stimuli, process these inputs, and respond by performing mechanical work. New chemical systems are responding to the challenge and form the basis for future responsive, adaptive, and active materials. In this article, we describe a particular biochemical-biomechanical network based on the microtubule cytoskeletal filament - itself a non-equilibrium chemical system. We trace the non-equilibrium aspects of the system from molecules to networks and describe how the cell uses this system to perform active work in essential processes. Finally, we discuss how microtubule-based engineered systems can serve as testbeds for autonomous chemical robots composed of biological and synthetic components.

Entities:  

Year:  2017        PMID: 28329028      PMCID: PMC5603359          DOI: 10.1039/c7cs00030h

Source DB:  PubMed          Journal:  Chem Soc Rev        ISSN: 0306-0012            Impact factor:   54.564


  158 in total

1.  Nanoscale transport enables active self-assembly of millimeter-scale wires.

Authors:  Ofer Idan; Amy Lam; Jovan Kamcev; John Gonzales; Ashutosh Agarwal; Henry Hess
Journal:  Nano Lett       Date:  2011-12-02       Impact factor: 11.189

2.  Multiscale modeling of the nanomechanics of microtubule protofilaments.

Authors:  Kelly E Theisen; Artem Zhmurov; Maycee E Newberry; Valeri Barsegov; Ruxandra I Dima
Journal:  J Phys Chem B       Date:  2012-04-27       Impact factor: 2.991

3.  "Gliding assays" for motor proteins: A theoretical analysis.

Authors: 
Journal:  Phys Rev Lett       Date:  1995-01-09       Impact factor: 9.161

4.  Katanin Severing and Binding Microtubules Are Inhibited by Tubulin Carboxy Tails.

Authors:  Megan E Bailey; Dan L Sackett; Jennifer L Ross
Journal:  Biophys J       Date:  2015-12-15       Impact factor: 4.033

5.  A smart dust biosensor powered by kinesin motors.

Authors:  Thorsten Fischer; Ashutosh Agarwal; Henry Hess
Journal:  Nat Nanotechnol       Date:  2009-01-18       Impact factor: 39.213

6.  Velocity Fluctuations in Kinesin-1 Gliding Motility Assays Originate in Motor Attachment Geometry Variations.

Authors:  Henri Palacci; Ofer Idan; Megan J Armstrong; Ashutosh Agarwal; Takahiro Nitta; Henry Hess
Journal:  Langmuir       Date:  2016-07-26       Impact factor: 3.882

7.  Parallel computation with molecular-motor-propelled agents in nanofabricated networks.

Authors:  Dan V Nicolau; Mercy Lard; Till Korten; Falco C M J M van Delft; Malin Persson; Elina Bengtsson; Alf Månsson; Stefan Diez; Heiner Linke; Dan V Nicolau
Journal:  Proc Natl Acad Sci U S A       Date:  2016-02-22       Impact factor: 11.205

8.  Intraflagellar transport balances continuous turnover of outer doublet microtubules: implications for flagellar length control.

Authors:  W F Marshall; J L Rosenbaum
Journal:  J Cell Biol       Date:  2001-10-29       Impact factor: 10.539

9.  Tubulin bond energies and microtubule biomechanics determined from nanoindentation in silico.

Authors:  Olga Kononova; Yaroslav Kholodov; Kelly E Theisen; Kenneth A Marx; Ruxandra I Dima; Fazly I Ataullakhanov; Ekaterina L Grishchuk; Valeri Barsegov
Journal:  J Am Chem Soc       Date:  2014-11-25       Impact factor: 15.419

10.  Remote control of myosin and kinesin motors using light-activated gearshifting.

Authors:  Muneaki Nakamura; Lu Chen; Stuart C Howes; Tony D Schindler; Eva Nogales; Zev Bryant
Journal:  Nat Nanotechnol       Date:  2014-08-03       Impact factor: 39.213

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  23 in total

Review 1.  Enzyme-Instructed Self-Assembly for Cancer Therapy and Imaging.

Authors:  Beom Jin Kim; Bing Xu
Journal:  Bioconjug Chem       Date:  2020-02-07       Impact factor: 4.774

2.  Nanowired Bioelectric Interfaces.

Authors:  Bozhi Tian; Charles M Lieber
Journal:  Chem Rev       Date:  2019-04-17       Impact factor: 60.622

3.  Dissipative biocatalytic cascades and gated transient biocatalytic cascades driven by nucleic acid networks.

Authors:  Yu Ouyang; Pu Zhang; Itamar Willner
Journal:  Sci Adv       Date:  2022-05-06       Impact factor: 14.957

4.  Minimizing Structural Bias in Single-Molecule Super-Resolution Microscopy.

Authors:  Hesam Mazidi; Jin Lu; Arye Nehorai; Matthew D Lew
Journal:  Sci Rep       Date:  2018-09-03       Impact factor: 4.379

5.  The Fuzziness of the Molecular World and Its Perspectives.

Authors:  Pier Luigi Gentili
Journal:  Molecules       Date:  2018-08-19       Impact factor: 4.411

6.  Temperature-controlled repeatable scrambling and induced-sorting of building blocks between cubic assemblies.

Authors:  Yi-Yang Zhan; Tatsuo Kojima; Kentaro Ishii; Satoshi Takahashi; Yohei Haketa; Hiromitsu Maeda; Susumu Uchiyama; Shuichi Hiraoka
Journal:  Nat Commun       Date:  2019-03-29       Impact factor: 14.919

7.  DNA-assisted swarm control in a biomolecular motor system.

Authors:  Jakia Jannat Keya; Ryuhei Suzuki; Arif Md Rashedul Kabir; Daisuke Inoue; Hiroyuki Asanuma; Kazuki Sada; Henry Hess; Akinori Kuzuya; Akira Kakugo
Journal:  Nat Commun       Date:  2018-01-31       Impact factor: 14.919

8.  Nonequilibrium associative retrieval of multiple stored self-assembly targets.

Authors:  Gili Bisker; Jeremy L England
Journal:  Proc Natl Acad Sci U S A       Date:  2018-10-22       Impact factor: 11.205

9.  Molecular Encapsulation Inside Microtubules Based on Tau-Derived Peptides.

Authors:  Hiroshi Inaba; Takahisa Yamamoto; Arif Md Rashedul Kabir; Akira Kakugo; Kazuki Sada; Kazunori Matsuura
Journal:  Chemistry       Date:  2018-09-24       Impact factor: 5.236

10.  Growth rate-dependent flexural rigidity of microtubules influences pattern formation in collective motion.

Authors:  Hang Zhou; Naoto Isozaki; Kazuya Fujimoto; Ryuji Yokokawa
Journal:  J Nanobiotechnology       Date:  2021-07-19       Impact factor: 10.435

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