| Literature DB >> 24903966 |
Dan Bi, Mingjie Chen, Xiaoli Zhang, Honglian Wang, Lei Xia, Qing Shang, Tongchuan Li, Dengna Zhu, Klas Blomgren, Lin He, Xiaoyang Wang, Qinghe Xing1, Changlian Zhu.
Abstract
BACKGROUND: The relationship between genetic factors and the development of cerebral palsy (CP) has recently attracted much attention. Polymorphisms in the genes encoding proinflammatory cytokines have been shown to be associated with susceptibility to perinatal brain injury and development of CP. Interleukin-6 (IL-6) is a proinflammatory cytokine that plays a pivotal role in neonatal brain injury, but conflicting results have been reported regarding the association between IL-6 single nucleotide polymorphisms (SNPs) and CP. The purpose of this study was to analyze IL-6 gene polymorphisms and protein expression and to explore the role of IL-6 in the Chinese CP population.Entities:
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Year: 2014 PMID: 24903966 PMCID: PMC4060844 DOI: 10.1186/1742-2094-11-100
Source DB: PubMed Journal: J Neuroinflammation ISSN: 1742-2094 Impact factor: 8.322
Sample description for gene polymorphism analysis
| | | | | |
| Spastic CP | 456 (64.0) | 325/131 | – | – |
| Non-spastic CP | 257 (36.0) | 169/88 | – | – |
| Total | 713 (100) | 494/219 | 753 (100) | 491/262 |
| | | | | |
| Term (≥37 weeks) | 496 (69.6) | 338/158 | 742 (98.5) | 481/261 |
| Preterm (<37 weeks) | 217 (30.4) | 156/61 | 11 (1.5) | 10/1 |
| Total | 713 (100) | 494/219 | 753 (100) | 491/262 |
| | | | | |
| ≥2,500 g | 552 (77.4) | 390/162 | 731 (97.1) | 475/256 |
| <2,500 g | 161 (22.6) | 104/57 | 22 (2.9) | 16/6 |
| Total | 713 (100) | 494/219 | 753 (100) | 491/262 |
| | | | | |
| No asphyxia | 484 (67.9) | 326/158 | 741 (98.4) | 482/259 |
| Asphyxia | 229 (32.1) | 168/61 | 12 (1.6) | 9/3 |
| Total | 713 (100) | 494/219 | 753 (100) | 491/262 |
| | | | | |
| With PVL | 75 (10.5) | 56/19 | – | – |
| Without PVL | 638 (89.5) | 438/200 | – | – |
| With MR | 274 (38.4) | 185/89 | – | – |
| Without MR | 439 (61.6) | 309/130 | – | – |
| With HIE | 342 (48.0) | 245/97 | – | – |
| Without HIE | 371 (52.0) | 249/122 | – | – |
| | | | | |
| PROM | 88 (12.3) | 62/26 | 14 (1.9) | 11/3 |
| No PROM | 625 (87.7) | 432/193 | 739 (98.1) | 480/259 |
| TPL | 57 (8.0) | 42/15 | 23 (3.1) | 17/6 |
| No TPL | 656 (92.0) | 452/204 | 730 (96.9) | 474/256 |
| PIH | 35 (4.9) | 23/12 | 14 (1.9) | 12/2 |
| No PIH | 678 (95.1) | 471/207 | 739 (98.1) | 479/260 |
CP, cerebral palsy; M, male; F, female; PVL, periventricular leukomalacia; MR, mental retardation; HIE, hypoxic ischemic encephalopathy; PROM, premature rupture of membrane; TPL, threatened premature labor; PIH, pregnancy-induced hypertension.
Sample description for cytokine quantification
| | | | | |
| CP with spastic | 58 (68.2) | 35/23 | – | – |
| CP without spastic | 27 (31.8) | 19/8 | – | – |
| Total | 85 (100) | 54/31 | 75 (100) | 62/13 |
| | | | | |
| Term (≥37 weeks) | 56 (65.9) | 41/15 | 70 (93.3) | 57/13 |
| Preterm (<37 weeks) | 29 (34.1) | 13/16 | 5 (6.7) | 5/0 |
| Total | 85 (100) | 54/31 | 75 (100) | 62/13 |
| | | | | |
| ≥2,500 g | 61 (71.8) | 43/18 | 71 (94.7) | 59/12 |
| <2,500 g | 24 (28.2) | 11/13 | 4 (5.3) | 3/1 |
| Total | 85 (100) | 54/31 | 75 (100) | 62/13 |
| | | | | |
| No asphyxia | 51 (60.0) | 32/19 | 73 (97.3) | 61/12 |
| Asphyxia | 34 (40.0) | 22/12 | 2 (2.7) | 1/1 |
| Total | 85 (100) | 54/31 | 75 (100) | 62/13 |
| | | | | |
| With PVL | 17 (20.0) | 11/6 | – | – |
| Without PVL | 68 (80.0) | 43/25 | – | – |
| With MR | 62 (72.9) | 37/25 | – | – |
| Without MR | 23 (27.1) | 17/6 | – | – |
| With HIE | 31 (36.5) | 20/11 | – | – |
| Without HIE | 54 (63.5) | 34/20 | – | – |
| | | | | |
| PROM | 19 (22.4) | 8/11 | 7 (9.3) | 5/2 |
| No PROM | 66 (77.6) | 46/20 | 68 (90.7) | 57/11 |
| TPL | 20 (23.5) | 15/5 | 15 (20.0) | 11/4 |
| No TPL | 65 (76.5) | 39/26 | 60 (80.0) | 51/9 |
| PIH | 8 (9.4) | 5/3 | 6 (8.0) | 5/1 |
| No PIH | 77 (90.6) | 49/28 | 69 (92.0) | 57/12 |
CP, cerebral palsy; M, male; F, female; PVL, periventricular leukomalacia; MR, mental retardation; HIE, hypoxic ischemic encephalopathy; PROM, premature rupture of membrane; TPL, threatened premature labor; PIH, pregnancy-induced hypertension.
Allele and genotype distribution of the five selected SNPs in cerebral palsy patients and controls
| rs1800796 | | C | G | | C/C | C/G | G/G | | |
| Case | 977 (0.690) | 439 (0.310) | 0.256 | 347 (0.490) | 283 (0.400) | 78 (0.110) | 0.300 | 0.081 | |
| Control | 992 (0.670) | 488 (0.330) | 334 (0.451) | 324 (0.438) | 82 (0.111) | 0.797 | |||
| rs2069837 | | A | G | | A/A | A/G | G/G | | |
| Case | 1138 (0.807) | 272 (0.193) | 0.062 | 469 (0.665) | 200 (0.284) | 36 (0.051) | 0.144 | 0.018 | |
| Control | 1134 (0.779) | 322 (0.221) | 448 (0.615) | 238 (0.327) | 42 (0.058) | 0.169 | |||
| rs2066992 | | G | T | | G/G | G/T | T/T | | |
| Case | 441 (0.311) | 977 (0.689) | 0.389 | 77 (0.109) | 287 (0.405) | 345 (0.487) | 0.316 | 0.140 | |
| Control | 483 (0.326) | 999 (0.674) | 77 (0.104) | 329 (0.444) | 335 (0.452) | 0.775 | |||
| rs2069840 | | C | G | | C/C | C/G | G/G | | |
| Case | 1300 (0.913) | 124 (0.087) | 0.503 | 591 (0.830) | 118 (0.166) | 3 (0.004) | 0.787 | 0.258 | |
| Control | 1346 (0.906) | 140 (0.094) | 607 (0.817) | 132 (0.178) | 4 (0.005) | 0.265 | |||
| rs10242595 | | A | G | | A/A | A/G | G/G | | |
| Case | 1255 (0.891) | 153 (0.109) | 0.435 | 560 (0.795) | 135 (0.192) | 9 (0.013) | 0.498 | 0.789 | |
| Control | 1279 (0.882) | 171 (0.118) | 569 (0.785) | 141 (0.194) | 15 (0.021) | 0.079 | |||
The linkage disequilibrium among the SNPs
|
| |||||
|---|---|---|---|---|---|
| rs1800796 | | 0.884 | 0.981 | 0.971 | 0.899 |
| rs2069837 | 0.463 | | 0.903 | 0.998 | 0.777 |
| rs2066992 | 0.948 | 0.497 | | 0.986 | 0.912 |
| rs2069840 | 0.203 | 0.026 | 0.211 | | 0.949 |
| rs10242595 | 0.228 | 0.025 | 0.235 | 0.704 |
The standardized D’ values are shown above the diagonal, and the r2 values are shown below the diagonal.
Allele and genotype distribution of the five selected SNPs in male cerebral palsy cases and controls
| rs1800796 | | C | G | | C/C | C/G | G/G | | |
| Case | 678 (0.690) | 304 (0.310) | 0.092 | 242 (0.493) | 194 (0.395) | 55 (0.112) | 0.113 | 0.093 | |
| Control | 631 (0.655) | 333 (0.345) | 206 (0.427) | 219 (0.454) | 57 (0.118) | 0.917 | |||
| rs2069837 | | A | G | | A/A | A/G | G/G | | |
| Case | 790 (0.808) | 188 (0.192) | 326 (0.667) | 138 (0.282) | 25 (0.051) | 0.044 | |||
| Control | 718 (0.759) | 228 (0.241) | 279 (0.590) | 160 (0.338) | 34 (0.072) | 0.101 | |||
| rs2066992 | | G | T | | G/G | G/T | T/T | | |
| Case | 303 (0.309) | 677 (0.691) | 0.119 | 53 (0.108) | 197 (0.402) | 240 (0.490) | 0.159 | 0.193 | |
| Control | 330 (0.342) | 634 (0.658) | 55 (0.114) | 220 (0.456) | 207 (0.429) | 0.764 | |||
| rs2069840 | | C | G | | C/C | C/G | G/G | | |
| Case | 901 (0.914) | 85 (0.086) | 0.646 | 411 (0.834) | 79 (0.160) | 3 (0.006) | 0.742 | 0.704 | |
| Control | 877 (0.908) | 89 (0.092) | 396 (0.820) | 85 (0.176) | 2 (0.004) | 0.253 | |||
| rs10242595 | | A | G | | A/A | A/G | G/G | | |
| Case | 870 (0.895) | 102 (0.105) | 0.304 | 391 (0.805) | 88 (0.181) | 7 (0.014) | 0.578 | 0.426 | |
| Control | 838 (0.880) | 114 (0.120) | 372 (0.782) | 94 (0.197) | 10 (0.021) | 0.168 | |||
aAfter the SNPSpD correction, the P value is 0.027.
Allele and genotype distributions of the SNPs in male spastic cerebral palsy patients and controls
| rs1800796 | | C | G | | C/C | C/G | G/G | | |
| Spastic | 458 (0.709) | 188 (0.291) | 169 (0.523) | 120 (0.372) | 34 (0.105) | 0.073 | |||
| Non-spastic | 220 (0.655) | 116 (0.345) | 0.995 | 73 (0.435) | 74 (0.440) | 21 (0.125) | 0.944 | 0.739 | |
| | Control | 631 (0.655) | 333 (0.345) | | 206 (0.427) | 219 (0.454) | 57 (0.118) | | 0.917 |
| rs2069837 | | A | G | | A/A | A/G | G/G | | |
| Spastic | 524 (0.816) | 118 (0.184) | 220 (0.685) | 84 (0.262) | 17 (0.053) | 0.022 | |||
| Non-spastic | 266 (0.792) | 70 (0.208) | 0.223 | 106 (0.631) | 54 (0.321) | 8 (0.048) | 0.457 | 0.740 | |
| | Control | 718 (0.759) | 228 (0.241) | | 279 (0.590) | 160 (0.338) | 34 (0.072) | | 0.101 |
| rs2066992 | | G | T | | G/G | G/T | T/T | | |
| Spastic | 189 (0.293) | 455 (0.707) | 34 (0.106) | 121 (0.376) | 167 (0.519) | 0.092 | |||
| Non-spastic | 114 (0.339) | 222 (0.661) | 0.919 | 19 (0.113) | 76 (0.452) | 73 (0.435) | 0.994 | 0.907 | |
| | Control | 330 (0.342) | 634 (0.658) | | 55 (0.114) | 220 (0.456) | 207 (0.429) | | 0.764 |
| rs2069840 | | C | G | | C/C | C/G | G/G | | |
| Spastic | 599 (0.924) | 49 (0.076) | 0.245 | 276 (0.852) | 47 (0.145) | 1 (0.003) | 0.489 | 0.498 | |
| Non-spastic | 302 (0.893) | 36 (0.107) | 0.440 | 135 (0.799) | 32 (0.189) | 2 (0.012) | 0.496 | 0.947 | |
| | Control | 877 (0.908) | 89 (0.092) | | 396 (0.820) | 85 (0.176) | 2 (0.004) | | 0.253 |
| rs10242595 | | A | G | | A/A | A/G | G/G | | |
| Spastic | 575 (0.901) | 63 (0.099) | 0.192 | 261 (0.818) | 53 (0.166) | 5 (0.016) | 0.444 | 0.235 | |
| Non-spastic | 295 (0.883) | 39 (0.117) | 0.885 | 130 (0.778) | 35 (0.210) | 2 (0.012) | 0.729 | 0.835 | |
| Control | 838 (0.880) | 114 (0.120) | 372 (0.782) | 94 (0.197) | 10 (0.021) | 0.168 | |||
aAfter the SNPSpD correction, the P value is 0.021.
Estimated IL-6 haplotype frequencies
| CAT | 446.99 (0.705) | 586.16 (0.634) | 0.011a | 1.331 [1.068–1.659] |
| GGG | 113.50 (0.179) | 202.19 (0.219) | 0.039 | 0.764 [0.591–0.987] |
| Global results | 0.037 |
Loci chosen for haplotype analysis: rs1800796, rs2069837, and rs2066992.
Haplotype frequency <0.03 in both controls and cases have been dropped.
aAfter Bonferroni correction the P value is 0.033.
OR, odds ratio; CI, confidence interval.
Allele and genotype distributions of the SNPs in male cerebral palsy (CP) patients with or without periventricular leukomalacia (PVL)
| rs1800796 | | C | G | | C/C | C/G | G/G | | |
| CP + PVL | 80 (0.714) | 32 (0.286) | 0.206 | 33 (0.589) | 14 (0.250) | 9 (0.161) | 0.004 | ||
| CP − PVL | 598 (0.687) | 272 (0.331) | 0.136 | 209 (0.480) | 180 (0.414) | 46 (0.106) | 0.272 | 0.437 | |
| | Control | 631 (0.655) | 333 (0.345) | | 206 (0.427) | 219 (0.454) | 57 (0.118) | | 0.917 |
| rs2069837 | | A | G | | A/A | A/G | G/G | | |
| CP + PVL | 91 (0.812) | 21 (0.188) | 0.207 | 39 (0.696) | 13 (0.232) | 4 (0.071) | 0.263 | 0.075 | |
| CP − PVL | 699 (0.807) | 167 (0.193) | 287 (0.663) | 125 (0.289) | 21 (0.048) | 0.057 | 0.131 | ||
| | Control | 718 (0.759) | 228 (0.241) | | 279 (0.590) | 160 (0.338) | 34 (0.072) | | 0.101 |
| rs2066992 | | G | T | | G/G | G/T | T/T | | |
| CP + PVL | 32 (0.286) | 80 (0.714) | 0.230 | 9 (0.161) | 14 (0.250) | 33 (0.589) | 0.004 | ||
| CP − PVL | 271 (0.312) | 597 (0.688) | 0.171 | 44 (0.101) | 183 (0.422) | 207 (0.477) | 0.348 | 0.705 | |
| | Control | 330 (0.342) | 634 (0.658) | | 55 (0.114) | 220 (0.456) | 207 (0.429) | | 0.764 |
| rs2069840 | | C | G | | C/C | C/G | G/G | | |
| CP + PVL | 105 (0.938) | 7 (0.062) | 0.554 | 49 (0.875) | 7 (0.125) | 0 (0.000) | 0.554 | 0.618 | |
| CP − PVL | 796 (0.911) | 78 (0.890) | 0.830 | 362 (0.828) | 72 (0.165) | 3 (0.007) | 0.778 | 0.777 | |
| | Control | 877 (0.908) | 89 (0.092) | | 396 (0.820) | 85 (0.176) | 2 (0.004) | | 0.253 |
| rs10242595 | | A | G | | A/A | A/G | G/G | | |
| CP + PVL | 99 (0.900) | 11 (0.100) | 0.543 | 45 (0.818) | 9 (0.164) | 1 (0.018) | 0.821 | 0.500 | |
| CP − PVL | 771 (0.894) | 91 (0.106) | 0.341 | 346 (0.803) | 79 (0.183) | 6 (0.014) | 0.603 | 0.542 | |
| Control | 838 (0.880) | 114 (0.120) | 372 (0.782) | 94 (0.197) | 10 (0.021) | 0.168 | |||
aAfter the SNPSpD correction, the P value is 0.039.
bAfter the SNPSpD correction, the P value is 0.042.
cAfter the SNPSpD correction, the P value is 0.039.
Allele and genotype distributions of the SNPs in male term cerebral palsy patients and controls
| rs1800796 | | C | G | | C/C | C/G | G/G | | |
| Case | 463 (0.689) | 209 (0.311) | 0.137 | 162 (0.482) | 139 (0.414) | 35 (0.104) | 0.282 | 0.525 | |
| | Control | 617 (0.654) | 327 (0.346) | | 20 (0.426) | 215 (0.456) | 56 (0.119) | | 0.897 |
| rs2069837 | | A | G | | A/A | A/G | G/G | | |
| Case | 540 (0.811) | 126 (0.189) | 220 (0.661) | 100 (0.300) | 13 (0.039) | 0.699 | |||
| | Control | 702 (0.758) | 224 (0.242) | | 272 (0.587) | 158 (0.341) | 33 (0.071) | | 0.134 |
| rs2066992 | | G | T | | G/G | G/T | T/T | | |
| Case | 209 (0.312) | 461 (0.688) | 0.203 | 33 (0.099) | 143 (0.427) | 159 (0.475) | 0.430 | 0.918 | |
| | Control | 323 (0.342) | 621 (0.658) | | 54 (0.114) | 215 (0.456) | 203 (0.430) | | 0.797 |
| rs2069840 | | C | G | | C/C | C/G | G/G | | |
| Case | 610 (0.905) | 64 (0.095) | 0.838 | 276 (0.819) | 58 (0.172) | 3 (0.009) | 0.701 | 0.980 | |
| | Control | 859 (0.908) | 87 (0.092) | | 388 (0.820) | 83 (0.175) | 2 (0.004) | | 0.271 |
| rs10242595 | | A | G | | A/A | A/G | G/G | | |
| Case | 595 (0.891) | 73 (0.109) | 0.544 | 266 (0.796) | 63 (0.189) | 5 (0.015) | 0.769 | 0.570 | |
| Control | 821 (0.881) | 111 (0.119) | 365 (0.783) | 91 (0.195) | 10 (0.021) | 0.134 | |||
aAfter the SNPSpD correction, the P value is 0.036.
Allele and genotype distributions of the SNPs in patients with or without maternal premature rupture of membrane (PROM)
| rs1800796 | | C | G | | C/C | C/G | G/G | | |
| CP + PROM | 121 (0.695) | 53 (0.305) | 0.504 | 49 (0.563) | 23 (0.264) | 15 (0.172) | 0.001 | ||
| CP − PROM | 856 (0.689) | 386 (0.311) | 0.292 | 298 (0.480) | 260 (0.419) | 63 (0.101) | 0.560 | 0.572 | |
| | Control | 992 (0.670) | 488 (0.330) | | 334 (0.451) | 324 (0.438) | 82 (0.111) | 0.797 | |
| rs2069837 | | A | G | | A/A | A/G | G/G | | |
| CP + PROM | 145 (0.824) | 31 (0.176) | 0.171 | 62 (0.705) | 21 (0.239) | 5 (0.057) | 0.231 | 0.095 | |
| CP − PROM | 993 (0.805) | 241 (0.195) | 0.101 | 407 (0.660) | 179 (0.290) | 31 (0.050) | 0.243 | 0.056 | |
| | Control | 1134 (0.779) | 322 (0.221) | | 448 (0.615) | 238 (0.327) | 42 (0.058) | | 0.169 |
| rs2066992 | | G | T | | G/G | G/T | T/T | | |
| CP + PROM | 54 (0.307) | 122 (0.693) | 0.609 | 15 (0.170) | 24 (0.273) | 49 (0.557) | 0.001 | ||
| CP − PROM | 387 (0.312) | 855 (0.688) | 0.425 | 62 (0.100) | 263 (0.424) | 296 (0.477) | 0.663 | 0.750 | |
| | Control | 483 (0.326) | 999 (0.674) | | 77 (0.104) | 329 (0.444) | 335 (0.452) | 0.775 | |
| rs2069840 | | C | G | | C/C | C/G | G/G | | |
| CP + PROM | 163 (0.926) | 13 (0.0734 | 0.377 | 75 (0.852) | 13 (0.148) | 0 (0.000) | 0.607 | 0.454 | |
| CP − PROM | 1137 (0.911) | 111 (0.089) | 0.635 | 516 (0.827) | 105 (0.168) | 3 (0.005) | 0.889 | 0.339 | |
| | Control | 1346 (0.906) | 140 (0.094) | | 607 (0.817) | 132 (0.178) | 4 (0.005) | | 0.265 |
| rs10242595 | | A | G | | A/A | A/G | G/G | | |
| CP + PROM | 153 (0.879) | 21 (0.121) | 0.915 | 68 (0.782) | 17 (0.195) | 2 (0.023) | 0.990 | 0.459 | |
| CP − PROM | 1102 (0.893) | 132 (0.107) | 0.371 | 492 (0.797) | 118 (0.191) | 7 (0.011) | 0.395 | 0.980 | |
| Control | 1279 (0.882) | 171 (0.118) | 569 (0.785) | 141 (0.194) | 15 (0.021) | 0.079 | |||
*Comparison between total CP patients with maternal PROM and without PROM.
aAfter the SNPSpD correction, the P value is 0.0018.
bAfter the SNPSpD correction, the P value is 0.033.
cAfter the SNPSpD correction, the P value is 0.015.
dAfter the SNPSpD correction, the P value is 0.036.
Figure 1Plasma IL-6 concentrations in CP patients and controls. (A) Distribution of plasma IL-6 concentrations between total CP patients (85 patients) and total controls (75 participants) and between subgroups analyzed by sex. (B) Plasma IL-6 concentrations among spastic CP patients (58 patients), non-spastic CP patients (27 patients), and controls. (C) Plasma concentrations among term CP patients (56 patients), preterm CP patients (29 patients), and controls. (D) Plasma IL-6 concentrations among CP patients with PVL (17 patients), CP patients without PVL (68 patients), and controls. Each dot represents one patient and each bar represents the mean value. *P <0.05; Mann-Whitney U-test. CP, cerebral palsy; PVL, periventricular leukomalacia.
Figure 2Comparison of genotypes and plasma IL-6 levels in CP patients and controls. (A) The comparison at rs1800796. (B) The comparison at rs2069837. (C) The comparison at rs2066992. Each dot represents one patient and each bar represents the mean value. *P <0.05; Mann-Whitney U-test. CP, cerebral palsy.