Literature DB >> 24900501

Biotin analogues with antibacterial activity are potent inhibitors of biotin protein ligase.

Tatiana P Soares da Costa1, William Tieu1, Min Y Yap2, Ondrej Zvarec1, Jan M Bell3, John D Turnidge4, John C Wallace1, Grant W Booker1, Matthew C J Wilce2, Andrew D Abell1, Steven W Polyak1.   

Abstract

There is a desperate need to develop new antibiotic agents to combat the rise of drug-resistant bacteria, such as clinically important Staphylococcus aureus. The essential multifunctional enzyme, biotin protein ligase (BPL), is one potential drug target for new antibiotics. We report the synthesis and characterization of a series of biotin analogues with activity against BPLs from S. aureus, Escherichia coli, and Homo sapiens. Two potent inhibitors with K i < 100 nM were identified with antibacterial activity against a panel of clinical isolates of S. aureus (MIC 2-16 μg/mL). Compounds with high ligand efficiency and >20-fold selectivity between the isozymes were identified and characterized. The antibacterial mode of action was shown to be via inhibition of BPL. The bimolecular interactions between the BPL and the inhibitors were defined by surface plasmon resonance studies and X-ray crystallography. These findings pave the way for second-generation inhibitors and antibiotics with greater potency and selectivity.

Entities:  

Keywords:  antibiotic; biotin protein ligase; enzyme; enzyme inhibitor; medicinal chemistry

Year:  2012        PMID: 24900501      PMCID: PMC4025796          DOI: 10.1021/ml300106p

Source DB:  PubMed          Journal:  ACS Med Chem Lett        ISSN: 1948-5875            Impact factor:   4.345


  22 in total

1.  A biotin analog inhibits acetyl-CoA carboxylase activity and adipogenesis.

Authors:  Keith L Levert; Grover L Waldrop; Jacqueline M Stephens
Journal:  J Biol Chem       Date:  2002-03-20       Impact factor: 5.157

Review 2.  Is bacterial fatty acid synthesis a valid target for antibacterial drug discovery?

Authors:  Joshua B Parsons; Charles O Rock
Journal:  Curr Opin Microbiol       Date:  2011-08-20       Impact factor: 7.934

3.  Selective inhibition of biotin protein ligase from Staphylococcus aureus.

Authors:  Tatiana P Soares da Costa; William Tieu; Min Y Yap; Nicole R Pendini; Steven W Polyak; Daniel Sejer Pedersen; Renato Morona; John D Turnidge; John C Wallace; Matthew C J Wilce; Grant W Booker; Andrew D Abell
Journal:  J Biol Chem       Date:  2012-03-21       Impact factor: 5.157

4.  Bisubstrate adenylation inhibitors of biotin protein ligase from Mycobacterium tuberculosis.

Authors:  Benjamin P Duckworth; Todd W Geders; Divya Tiwari; Helena I Boshoff; Paul A Sibbald; Clifton E Barry; Dirk Schnappinger; Barry C Finzel; Courtney C Aldrich
Journal:  Chem Biol       Date:  2011-11-23

5.  Biotin protein ligase from Saccharomyces cerevisiae. The N-terminal domain is required for complete activity.

Authors:  S W Polyak; A Chapman-Smith; P J Brautigan; J C Wallace
Journal:  J Biol Chem       Date:  1999-11-12       Impact factor: 5.157

6.  Naturally occurring antimetabolite antibiotic related to biotin.

Authors:  L J Hanka; M E Bergy; R B Kelly
Journal:  Science       Date:  1966-12-30       Impact factor: 47.728

7.  Inhibition of biotin carboxylase by a reaction intermediate analog: implications for the kinetic mechanism.

Authors:  C Z Blanchard; D Amspacher; R Strongin; G L Waldrop
Journal:  Biochem Biophys Res Commun       Date:  1999-12-20       Impact factor: 3.575

8.  Biotin sensing at the molecular level.

Authors:  Dorothy Beckett
Journal:  J Nutr       Date:  2008-12-04       Impact factor: 4.798

9.  Evidence for distinct ligand-bound conformational states of the multifunctional Escherichia coli repressor of biotin biosynthesis.

Authors:  Y Xu; E Nenortas; D Beckett
Journal:  Biochemistry       Date:  1995-12-26       Impact factor: 3.162

10.  Purification, crystallization and preliminary crystallographic analysis of biotin protein ligase from Staphylococcus aureus.

Authors:  Nicole R Pendini; Steve W Polyak; Grant W Booker; John C Wallace; Matthew C J Wilce
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2008-05-23
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  14 in total

1.  Targeting Mycobacterium tuberculosis Biotin Protein Ligase (MtBPL) with Nucleoside-Based Bisubstrate Adenylation Inhibitors.

Authors:  Matthew R Bockman; Alvin S Kalinda; Riccardo Petrelli; Teresa De la Mora-Rey; Divya Tiwari; Feng Liu; Surrendra Dawadi; Madhumitha Nandakumar; Kyu Y Rhee; Dirk Schnappinger; Barry C Finzel; Courtney C Aldrich
Journal:  J Med Chem       Date:  2015-09-03       Impact factor: 7.446

2.  Structural characterization of Staphylococcus aureus biotin protein ligase and interaction partners: an antibiotic target.

Authors:  Nicole R Pendini; Min Y Yap; D A K Traore; Steven W Polyak; Nathan P Cowieson; Andrew Abell; Grant W Booker; John C Wallace; Jacqueline A Wilce; Matthew C J Wilce
Journal:  Protein Sci       Date:  2013-06       Impact factor: 6.725

3.  Improved Synthesis of Biotinol-5'-AMP: Implications for Antibacterial Discovery.

Authors:  William Tieu; Steven W Polyak; Ashleigh S Paparella; Min Y Yap; Tatiana P Soares da Costa; Belinda Ng; Geqing Wang; Richard Lumb; Jan M Bell; John D Turnidge; Matthew C J Wilce; Grant W Booker; Andrew D Abell
Journal:  ACS Med Chem Lett       Date:  2014-12-11       Impact factor: 4.345

4.  New Series of BPL Inhibitors To Probe the Ribose-Binding Pocket of Staphylococcus aureus Biotin Protein Ligase.

Authors:  Jiage Feng; Ashleigh S Paparella; William Tieu; David Heim; Sarah Clark; Andrew Hayes; Grant W Booker; Steven W Polyak; Andrew D Abell
Journal:  ACS Med Chem Lett       Date:  2016-10-10       Impact factor: 4.345

5.  An environment-friendly methodology for the construction of diversified bicycloacenaphtho[1,2-d]imidazole-8-thione scaffolds using spinel NiFe2O4 nanoparticles as a sustainable catalyst.

Authors:  Soumitra Rana; Soumyadip Basu; Chhanda Mukhopadhyay
Journal:  Mol Divers       Date:  2022-01-03       Impact factor: 3.364

6.  Bisubstrate Inhibitors of Biotin Protein Ligase in Mycobacterium tuberculosis Resistant to Cyclonucleoside Formation.

Authors:  Ce Shi; Divya Tiwari; Daniel J Wilson; Christopher L Seiler; Dirk Schnappinger; Courtney C Aldrich
Journal:  ACS Med Chem Lett       Date:  2013-12-12       Impact factor: 4.345

Review 7.  The Mechanistic Targets of Antifungal Agents: An Overview.

Authors:  Tryphon K Mazu; Barbara A Bricker; Hernan Flores-Rozas; Seth Y Ablordeppey
Journal:  Mini Rev Med Chem       Date:  2016       Impact factor: 3.862

8.  Chloromethyl-triazole: a new motif for site-selective pseudo-acylation of proteins.

Authors:  Richard C Brewster; Georgina C Gavins; Barbara Günthardt; Sarah Farr; Kimberly M Webb; Philipp Voigt; Alison N Hulme
Journal:  Chem Commun (Camb)       Date:  2016-10-06       Impact factor: 6.222

Review 9.  Biotin Protein Ligase Is a Target for New Antibacterials.

Authors:  Jiage Feng; Ashleigh S Paparella; Grant W Booker; Steven W Polyak; Andrew D Abell
Journal:  Antibiotics (Basel)       Date:  2016-07-25

10.  Advanced Resistance Studies Identify Two Discrete Mechanisms in Staphylococcus aureus to Overcome Antibacterial Compounds that Target Biotin Protein Ligase.

Authors:  Andrew J Hayes; Jiulia Satiaputra; Louise M Sternicki; Ashleigh S Paparella; Zikai Feng; Kwang J Lee; Beatriz Blanco- Rodriguez; William Tieu; Bart A Eijkelkamp; Keith E Shearwin; Tara L Pukala; Andrew D Abell; Grant W Booker; Steven W Polyak
Journal:  Antibiotics (Basel)       Date:  2020-04-06
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