Literature DB >> 2489104

Structural versatility of peptides containing C alpha, alpha-dialkylated glycines. An X-ray diffraction study of six 1-aminocyclopropane-1-carboxylic acid rich peptides.

E Benedetti1, B Di Blasio, V Pavone, C Pedone, A Santini, V Barone, F Fraternali, F Lelj, A Bavoso, M Crisma.   

Abstract

The molecular and crystal structures of six fully blocked, Ac3c-rich peptides to the tetramer level were determined by X-ray diffraction. The peptides are Fmoc-(Ac3c)2-OMe-CH3OH, Ac-(Ac3c)2-OMe, t-Boc-Ac3c-L-Phe-OMe, pBrBz-(Ac3c)3-OMe.H2O, Z-Gly-Ac3c-Gly-OTmb.(CH3)2CO, and t-Boc-(Ac3c)4-OMe.2H2O. Type-I (I') beta-bends and distorted 3(10)-helices were found to be typical of the tri- and tetrapeptides, respectively. In the dipeptides, too short to form beta-bend conformations, other less common structural features may be observed. The average geometry of the cyclopropyl moiety of the Ac3c residue is asymmetric and the N-C alpha-C' bond angle is significantly expanded from the regular tetrahedral value. A comparison with the structural preferences of other extensively investigated C alpha, alpha-dialylated alpha-amino acids is made and the implications for the use of the Ac3c residue in conformational design are examined.

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Year:  1989        PMID: 2489104     DOI: 10.1016/0141-8130(89)90007-x

Source DB:  PubMed          Journal:  Int J Biol Macromol        ISSN: 0141-8130            Impact factor:   6.953


  9 in total

1.  PAPQMD parametrization of molecular systems with cyclopropyl rings: conformational study of homopeptides constituted by 1-aminocyclopropane-1-carboxylic acid.

Authors:  C Alemán; J Casanovas; S E Galembeck
Journal:  J Comput Aided Mol Des       Date:  1998-05       Impact factor: 3.686

2.  Structural studies of β-turn-containing peptide catalysts for atroposelective quinazolinone bromination.

Authors:  A J Metrano; N C Abascal; B Q Mercado; E K Paulson; S J Miller
Journal:  Chem Commun (Camb)       Date:  2016-03-10       Impact factor: 6.222

3.  A Protocol for the Design of Protein and Peptide Nanostructure Self-Assemblies Exploiting Synthetic Amino Acids.

Authors:  Nurit Haspel; Jie Zheng; Carlos Aleman; David Zanuy; Ruth Nussinov
Journal:  Methods Mol Biol       Date:  2017

4.  Asymmetric Radical Cyclopropanation of Dehydroaminocarboxylates: Stereoselective Synthesis of Cyclopropyl α-Amino Acids.

Authors:  Wan-Chen Cindy Lee; Duo-Sheng Wang; Congzhe Zhang; Jingjing Xie; Bo Li; X Peter Zhang
Journal:  Chem       Date:  2021-03-29       Impact factor: 25.832

5.  Side-chain to backbone interactions dictate the conformational preferences of a cyclopentane arginine analogue.

Authors:  Guillem Revilla-López; Juan Torras; Ana I Jiménez; Carlos Cativiela; Ruth Nussinov; Carlos Alemán
Journal:  J Org Chem       Date:  2009-03-20       Impact factor: 4.354

6.  Structural analysis of a beta-helical protein motif stabilized by targeted replacements with conformationally constrained amino acids.

Authors:  Gema Ballano; David Zanuy; Ana I Jiménez; Carlos Cativiela; Ruth Nussinov; Carlos Alemán
Journal:  J Phys Chem B       Date:  2008-09-24       Impact factor: 2.991

7.  Protein segments with conformationally restricted amino acids can control supramolecular organization at the nanoscale.

Authors:  David Zanuy; Gema Ballano; Ana I Jiménez; Jordi Casanovas; Nurit Haspel; Carlos Cativiela; David Curcó; Ruth Nussinov; Carlos Alemán
Journal:  J Chem Inf Model       Date:  2009-07       Impact factor: 4.956

8.  Novel α-MSH peptide analogues with broad spectrum antimicrobial activity.

Authors:  Paolo Grieco; Alfonso Carotenuto; Luigia Auriemma; Antonio Limatola; Salvatore Di Maro; Francesco Merlino; Maria Luisa Mangoni; Vincenzo Luca; Antonio Di Grazia; Stefano Gatti; Pietro Campiglia; Isabel Gomez-Monterrey; Ettore Novellino; Anna Catania
Journal:  PLoS One       Date:  2013-04-23       Impact factor: 3.240

9.  Diversity of Secondary Structure in Catalytic Peptides with β-Turn-Biased Sequences.

Authors:  Anthony J Metrano; Nadia C Abascal; Brandon Q Mercado; Eric K Paulson; Anna E Hurtley; Scott J Miller
Journal:  J Am Chem Soc       Date:  2016-12-28       Impact factor: 15.419

  9 in total

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