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Literature DB >> 19548653

Protein segments with conformationally restricted amino acids can control supramolecular organization at the nanoscale.

David Zanuy¹, Gema Ballano, Ana I Jiménez, Jordi Casanovas, Nurit Haspel, Carlos Cativiela, David Curcó, Ruth Nussinov, Carlos Alemán.

Abstract

Entities: Chemical Disease Species

Mesh：

Substances：

Year: 2009 PMID： 19548653 PMCID： PMC7241869 DOI： 10.1021/ci9001487

Source DB: PubMed Journal: J Chem Inf Model ISSN： 1549-9596 Impact factor: 4.956

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46 in total

Review 1. Design of folded peptides.

Authors: J Venkatraman; S C Shankaramma; P Balaram
Journal: Chem Rev Date: 2001-10 Impact factor: 60.622

2. First observation of two consecutive gamma turns in a crystalline linear dipeptide.

Authors: Ana I Jiménez; Gema Ballano; Carlos Cativiela
Journal: Angew Chem Int Ed Engl Date: 2005-01-07 Impact factor: 15.336

3. Scalable molecular dynamics with NAMD.

Authors: James C Phillips; Rosemary Braun; Wei Wang; James Gumbart; Emad Tajkhorshid; Elizabeth Villa; Christophe Chipot; Robert D Skeel; Laxmikant Kalé; Klaus Schulten
Journal: J Comput Chem Date: 2005-12 Impact factor: 3.376

4. Backbone conformational preferences and pseudorotational ring puckering of 1-aminocyclopentane-1-carboxylic acid.

Authors: Carlos Aleman; David Zanuy; Jordi Casanovas; Carlos Cativiela; Ruth Nussinov
Journal: J Phys Chem B Date: 2006-10-26 Impact factor: 2.991

5. Use of constrained synthetic amino acids in beta-helix proteins for conformational control.

Authors: David Zanuy; Ana I Jiménez; Carlos Cativiela; Ruth Nussinov; Carlos Alemán
Journal: J Phys Chem B Date: 2007-03-08 Impact factor: 2.991

Review 6. Designing peptide based nanomaterials.

Authors: Rein V Ulijn; Andrew M Smith
Journal: Chem Soc Rev Date: 2008-01-10 Impact factor: 54.564

Review 7. Structure and evolution of parallel beta-helix proteins.

Authors: J Jenkins; O Mayans; R Pickersgill
Journal: J Struct Biol Date: 1998 Impact factor: 2.867

8. Side-chain to backbone interactions dictate the conformational preferences of a cyclopentane arginine analogue.

Authors: Guillem Revilla-López; Juan Torras; Ana I Jiménez; Carlos Cativiela; Ruth Nussinov; Carlos Alemán
Journal: J Org Chem Date: 2009-03-20 Impact factor: 4.354

9. Structural versatility of peptides containing C alpha, alpha-dialkylated glycines. An X-ray diffraction study of six 1-aminocyclopropane-1-carboxylic acid rich peptides.

Authors: E Benedetti; B Di Blasio; V Pavone; C Pedone; A Santini; V Barone; F Fraternali; F Lelj; A Bavoso; M Crisma
Journal: Int J Biol Macromol Date: 1989-12 Impact factor: 6.953

10. Rational redesign of the folding pathway of a modular protein.

Authors: Alan R Lowe; Laura S Itzhaki
Journal: Proc Natl Acad Sci U S A Date: 2007-02-13 Impact factor: 11.205

5 in total

1. NCAD, a database integrating the intrinsic conformational preferences of non-coded amino acids.

Authors: Guillem Revilla-López; Juan Torras; David Curcó; Jordi Casanovas; M Isabel Calaza; David Zanuy; Ana I Jiménez; Carlos Cativiela; Ruth Nussinov; Piotr Grodzinski; Carlos Alemán
Journal: J Phys Chem B Date: 2010-06-03 Impact factor: 2.991

2. Integrating the intrinsic conformational preferences of noncoded α-amino acids modified at the peptide bond into the noncoded amino acids database.

Authors: Guillem Revilla-López; Francisco Rodríguez-Ropero; David Curcó; Juan Torras; M Isabel Calaza; David Zanuy; Ana I Jiménez; Carlos Cativiela; Ruth Nussinov; Carlos Alemán
Journal: Proteins Date: 2011-04-12