Literature DB >> 24886697

Discovery of single-gene inborn errors of immunity by next generation sequencing.

Mary Ellen Conley1, Jean-Laurent Casanova2.   

Abstract

Many patients with clinical and laboratory evidence of primary immunodeficiency do not have a gene specific diagnosis. The use of next generation sequencing, particularly whole exome sequencing, has given us an extraordinarily powerful tool to identify the disease-causing genes in some of these patients. At least 34 new gene defects have been identified in the last 4 years. These findings document the striking heterogeneity of the phenotype in patients with mutations in the same gene. In some cases this can be attributed to loss-of-function mutations in some patients, but gain-of-function mutations in others. In addition, the surprisingly high frequency of autosomal dominant immunodeficiencies with variable penetrance, and de novo mutations in disorders with a severe phenotype has been unmasked.
Copyright © 2014 Elsevier Ltd. All rights reserved.

Entities:  

Mesh:

Year:  2014        PMID: 24886697      PMCID: PMC4198453          DOI: 10.1016/j.coi.2014.05.004

Source DB:  PubMed          Journal:  Curr Opin Immunol        ISSN: 0952-7915            Impact factor:   7.486


  74 in total

1.  Familial pityriasis rubra pilaris is caused by mutations in CARD14.

Authors:  Dana Fuchs-Telem; Ofer Sarig; Maurice A M van Steensel; Ofer Isakov; Shirli Israeli; Janna Nousbeck; Katharina Richard; Veronique Winnepenninckx; Marigje Vernooij; Noam Shomron; Jouni Uitto; Philip Fleckman; Gabriele Richard; Eli Sprecher
Journal:  Am J Hum Genet       Date:  2012-06-14       Impact factor: 11.025

2.  CD27 deficiency is associated with combined immunodeficiency and persistent symptomatic EBV viremia.

Authors:  Joris M van Montfrans; Andy I M Hoepelman; Sigrid Otto; Marielle van Gijn; Lisette van de Corput; Roel A de Weger; Linda Monaco-Shawver; Pinaki P Banerjee; Elisabeth A M Sanders; Cornelia M Jol-van der Zijde; Michael R Betts; Jordan S Orange; Andries C Bloem; Kiki Tesselaar
Journal:  J Allergy Clin Immunol       Date:  2011-12-24       Impact factor: 10.793

3.  Rare and common variants in CARD14, encoding an epidermal regulator of NF-kappaB, in psoriasis.

Authors:  Catherine T Jordan; Li Cao; Elisha D O Roberson; Shenghui Duan; Cynthia A Helms; Rajan P Nair; Kristina Callis Duffin; Philip E Stuart; David Goldgar; Genki Hayashi; Emily H Olfson; Bing-Jian Feng; Clive R Pullinger; John P Kane; Carol A Wise; Raphaela Goldbach-Mansky; Michelle A Lowes; Lynette Peddle; Vinod Chandran; Wilson Liao; Proton Rahman; Gerald G Krueger; Dafna Gladman; James T Elder; Alan Menter; Anne M Bowcock
Journal:  Am J Hum Genet       Date:  2012-04-19       Impact factor: 11.025

4.  Mutations in ZBTB24 are associated with immunodeficiency, centromeric instability, and facial anomalies syndrome type 2.

Authors:  Jessica C de Greef; Jun Wang; Judit Balog; Johan T den Dunnen; Rune R Frants; Kirsten R Straasheijm; Caner Aytekin; Mirjam van der Burg; Laurence Duprez; Alina Ferster; Andrew R Gennery; Giorgio Gimelli; Ismail Reisli; Catharina Schuetz; Ansgar Schulz; Dominique F C M Smeets; Yves Sznajer; Cisca Wijmenga; Marja C van Eggermond; Monique M van Ostaijen-Ten Dam; Arjan C Lankester; Maarten J D van Tol; Peter J van den Elsen; Corry M Weemaes; Silvère M van der Maarel
Journal:  Am J Hum Genet       Date:  2011-05-19       Impact factor: 11.025

5.  Impaired response to interferon-alpha/beta and lethal viral disease in human STAT1 deficiency.

Authors:  Stéphanie Dupuis; Emmanuelle Jouanguy; Sami Al-Hajjar; Claire Fieschi; Ibrahim Zaid Al-Mohsen; Suliman Al-Jumaah; Kun Yang; Ariane Chapgier; Céline Eidenschenk; Pierre Eid; Abdulaziz Al Ghonaium; Haysam Tufenkeji; Husn Frayha; Suleiman Al-Gazlan; Hassan Al-Rayes; Robert D Schreiber; Ion Gresser; Jean-Laurent Casanova
Journal:  Nat Genet       Date:  2003-02-18       Impact factor: 38.330

6.  Whole-exome sequencing links caspase recruitment domain 11 (CARD11) inactivation to severe combined immunodeficiency.

Authors:  Johann Greil; Tobias Rausch; Thomas Giese; Obul R Bandapalli; Volker Daniel; Isabelle Bekeredjian-Ding; Adrian M Stütz; Christoph Drees; Susanne Roth; Jürgen Ruland; Jan O Korbel; Andreas E Kulozik
Journal:  J Allergy Clin Immunol       Date:  2013-04-03       Impact factor: 10.793

7.  Ribosomal protein SA haploinsufficiency in humans with isolated congenital asplenia.

Authors:  Alexandre Bolze; Nizar Mahlaoui; Minji Byun; Bridget Turner; Nikolaus Trede; Steven R Ellis; Avinash Abhyankar; Yuval Itan; Etienne Patin; Samuel Brebner; Paul Sackstein; Anne Puel; Capucine Picard; Laurent Abel; Lluis Quintana-Murci; Saul N Faust; Anthony P Williams; Richard Baretto; Michael Duddridge; Usha Kini; Andrew J Pollard; Catherine Gaud; Pierre Frange; Daniel Orbach; Jean-Francois Emile; Jean-Louis Stephan; Ricardo Sorensen; Alessandro Plebani; Lennart Hammarstrom; Mary Ellen Conley; Licia Selleri; Jean-Laurent Casanova
Journal:  Science       Date:  2013-04-11       Impact factor: 47.728

8.  Immunodeficiency and disseminated mycobacterial infection associated with homozygous nonsense mutation of IKKβ.

Authors:  Siobhan O Burns; Vincent Plagnol; Beatriz Morillo Gutierrez; Daifulah Al Zahrani; James Curtis; Miguel Gaspar; Amel Hassan; Alison M Jones; Marian Malone; Dyanne Rampling; Alex McLatchie; Rainer Doffinger; Kimberly C Gilmour; Frances Henriquez; Adrian J Thrasher; H Bobby Gaspar; Sergey Nejentsev
Journal:  J Allergy Clin Immunol       Date:  2014-03-27       Impact factor: 10.793

9.  Similar recombination-activating gene (RAG) mutations result in similar immunobiological effects but in different clinical phenotypes.

Authors:  Hanna IJspeert; Gertjan J Driessen; Michael J Moorhouse; Nico G Hartwig; Beata Wolska-Kusnierz; Krzysztof Kalwak; Anna Pituch-Noworolska; Irina Kondratenko; Joris M van Montfrans; Ester Mejstrikova; Arjan C Lankester; Anton W Langerak; Dik C van Gent; Andrew P Stubbs; Jacques J M van Dongen; Mirjam van der Burg
Journal:  J Allergy Clin Immunol       Date:  2014-01-11       Impact factor: 10.793

10.  The Thr224Asn mutation in the VPS45 gene is associated with the congenital neutropenia and primary myelofibrosis of infancy.

Authors:  Polina Stepensky; Ann Saada; Marianne Cowan; Adi Tabib; Ute Fischer; Yackov Berkun; Hani Saleh; Natalia Simanovsky; Aviram Kogot-Levin; Michael Weintraub; Hamam Ganaiem; Avraham Shaag; Shamir Zenvirt; Arndt Borkhardt; Orly Elpeleg; Nia J Bryant; Dror Mevorach
Journal:  Blood       Date:  2013-04-18       Impact factor: 22.113

View more
  43 in total

1.  Novel nonsense gain-of-function NFKB2 mutations associated with a combined immunodeficiency phenotype.

Authors:  Hye Sun Kuehn; Julie E Niemela; Karthik Sreedhara; Jennifer L Stoddard; Jennifer Grossman; Christian A Wysocki; M Teresa de la Morena; Mary Garofalo; Jingga Inlora; Michael P Snyder; David B Lewis; Constantine A Stratakis; Thomas A Fleisher; Sergio D Rosenzweig
Journal:  Blood       Date:  2017-08-04       Impact factor: 22.113

2.  Genomics is rapidly advancing precision medicine for immunological disorders.

Authors:  Yu Zhang; Helen C Su; Michael J Lenardo
Journal:  Nat Immunol       Date:  2015-10       Impact factor: 25.606

Review 3.  Genomics of Immune Diseases and New Therapies.

Authors:  Michael Lenardo; Bernice Lo; Carrie L Lucas
Journal:  Annu Rev Immunol       Date:  2015-12-23       Impact factor: 28.527

4.  Mutations in the linker domain affect phospho-STAT3 function and suggest targets for interrupting STAT3 activity.

Authors:  Claudia Mertens; Bhagwattie Haripal; Sebastian Klinge; James E Darnell
Journal:  Proc Natl Acad Sci U S A       Date:  2015-11-09       Impact factor: 11.205

5.  A Multiplex Kindred with Hennekam Syndrome due to Homozygosity for a CCBE1 Mutation that does not Prevent Protein Expression.

Authors:  Carolyn C Jackson; Lucy Best; Lazaro Lorenzo; Jean-Laurent Casanova; Jochen Wacker; Simone Bertz; Abbas Agaimy; Thomas Harrer
Journal:  J Clin Immunol       Date:  2015-12-19       Impact factor: 8.317

Review 6.  Systems immunology: just getting started.

Authors:  Mark M Davis; Cristina M Tato; David Furman
Journal:  Nat Immunol       Date:  2017-06-20       Impact factor: 25.606

7.  Severe viral respiratory infections in children with IFIH1 loss-of-function mutations.

Authors:  Samira Asgari; Luregn J Schlapbach; Stéphanie Anchisi; Christian Hammer; Istvan Bartha; Thomas Junier; Geneviève Mottet-Osman; Klara M Posfay-Barbe; David Longchamp; Martin Stocker; Samuel Cordey; Laurent Kaiser; Thomas Riedel; Tony Kenna; Deborah Long; Andreas Schibler; Amalio Telenti; Caroline Tapparel; Paul J McLaren; Dominique Garcin; Jacques Fellay
Journal:  Proc Natl Acad Sci U S A       Date:  2017-07-17       Impact factor: 11.205

Review 8.  Toll-like receptor signaling in primary immune deficiencies.

Authors:  Paul J Maglione; Noa Simchoni; Charlotte Cunningham-Rundles
Journal:  Ann N Y Acad Sci       Date:  2015-04-30       Impact factor: 5.691

Review 9.  Immunological loss-of-function due to genetic gain-of-function in humans: autosomal dominance of the third kind.

Authors:  Bertrand Boisson; Pierre Quartier; Jean-Laurent Casanova
Journal:  Curr Opin Immunol       Date:  2015-01-31       Impact factor: 7.486

Review 10.  Chemokines, their receptors and human disease: the good, the bad and the itchy.

Authors:  Vanessa L Bryant; Charlotte A Slade
Journal:  Immunol Cell Biol       Date:  2015-04       Impact factor: 5.126

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.