Literature DB >> 24878805

Theoretical study of methyl group transfer assisted by proton transfer reaction in the N-acylated imidates.

Rezika Larabi1, Soraya Abtouche, Meziane Brahimi.   

Abstract

The single methyl group transfer (MGT), double MGT and single MGT assisted by proton transfer (PT) that occurs in small biological systems N-methoxy methylene formamide and N-hydroxy methylen formamide (NMMF-NHMF) have been investigated completely in the present study using density functional theory (DFT) and Möller-Plesset perturbation (MP2) methods with a 6-31G(d) basis set. The barrier height for MGT assisted by PT is significantly lower than those of the single and double MGT. Polar solvents decrease the energy barriers.

Entities:  

Year:  2014        PMID: 24878805     DOI: 10.1007/s00894-014-2302-9

Source DB:  PubMed          Journal:  J Mol Model        ISSN: 0948-5023            Impact factor:   1.810


  28 in total

1.  Structure, energetics, and dynamics of the nucleic Acid base pairs: nonempirical ab initio calculations.

Authors:  P Hobza; J Sponer
Journal:  Chem Rev       Date:  1999-11-10       Impact factor: 60.622

2.  A smooth, nonsingular, and faithful discretization scheme for polarizable continuum models: the switching/Gaussian approach.

Authors:  Adrian W Lange; John M Herbert
Journal:  J Chem Phys       Date:  2010-12-28       Impact factor: 3.488

3.  Semiempirical GGA-type density functional constructed with a long-range dispersion correction.

Authors:  Stefan Grimme
Journal:  J Comput Chem       Date:  2006-11-30       Impact factor: 3.376

4.  Efficient and accurate solvation energy calculation from polarizable continuum models.

Authors:  Shiang-Tai Lin; Chieh-Ming Hsieh
Journal:  J Chem Phys       Date:  2006-09-28       Impact factor: 3.488

5.  Crystal structures of NodS N-methyltransferase from Bradyrhizobium japonicum in ligand-free form and as SAH complex.

Authors:  Ozgur Cakici; Michal Sikorski; Tomasz Stepkowski; Grzegorz Bujacz; Mariusz Jaskolski
Journal:  J Mol Biol       Date:  2010-10-21       Impact factor: 5.469

6.  Quantitative relationship between guanine O(6)-alkyl lesions produced by Onrigin™ and tumor resistance by O(6)-alkylguanine-DNA alkyltransferase.

Authors:  Kimiko Ishiguro; Yong-Lian Zhu; Krishnamurthy Shyam; Philip G Penketh; Raymond P Baumann; Alan C Sartorelli
Journal:  Biochem Pharmacol       Date:  2010-07-21       Impact factor: 5.858

7.  Adrenaline synthesis: control by the pituitary gland and adrenal glucocorticoids.

Authors:  R J Wurtman; J Axelrod
Journal:  Science       Date:  1965-12-10       Impact factor: 47.728

8.  Accurate description of van der Waals complexes by density functional theory including empirical corrections.

Authors:  Stefan Grimme
Journal:  J Comput Chem       Date:  2004-09       Impact factor: 3.376

9.  The reaction mechanism of phenylethanolamine N-methyltransferase: a density functional theory study.

Authors:  Polina Georgieva; Qian Wu; Michael J McLeish; Fahmi Himo
Journal:  Biochim Biophys Acta       Date:  2009-09-03

10.  Visualizing molecular juggling within a B12-dependent methyltransferase complex.

Authors:  Yan Kung; Nozomi Ando; Tzanko I Doukov; Leah C Blasiak; Güneş Bender; Javier Seravalli; Stephen W Ragsdale; Catherine L Drennan
Journal:  Nature       Date:  2012-03-14       Impact factor: 49.962

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