Literature DB >> 24876499

Structures of PI4KIIIβ complexes show simultaneous recruitment of Rab11 and its effectors.

John E Burke1, Alison J Inglis2, Olga Perisic2, Glenn R Masson2, Stephen H McLaughlin2, Florentine Rutaganira3, Kevan M Shokat3, Roger L Williams1.   

Abstract

Phosphatidylinositol 4-kinases (PI4Ks) and small guanosine triphosphatases (GTPases) are essential for processes that require expansion and remodeling of phosphatidylinositol 4-phosphate (PI4P)-containing membranes, including cytokinesis, intracellular development of malarial pathogens, and replication of a wide range of RNA viruses. However, the structural basis for coordination of PI4K, GTPases, and their effectors is unknown. Here, we describe structures of PI4Kβ (PI4KIIIβ) bound to the small GTPase Rab11a without and with the Rab11 effector protein FIP3. The Rab11-PI4KIIIβ interface is distinct compared with known structures of Rab complexes and does not involve switch regions used by GTPase effectors. Our data provide a mechanism for how PI4KIIIβ coordinates Rab11 and its effectors on PI4P-enriched membranes and also provide strategies for the design of specific inhibitors that could potentially target plasmodial PI4KIIIβ to combat malaria.
Copyright © 2014, American Association for the Advancement of Science.

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Year:  2014        PMID: 24876499      PMCID: PMC4046302          DOI: 10.1126/science.1253397

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  41 in total

1.  Distinct roles for the yeast phosphatidylinositol 4-kinases, Stt4p and Pik1p, in secretion, cell growth, and organelle membrane dynamics.

Authors:  A Audhya; M Foti; S D Emr
Journal:  Mol Biol Cell       Date:  2000-08       Impact factor: 4.138

Review 2.  Coordination between RAB GTPase and phosphoinositide regulation and functions.

Authors:  Steve Jean; Amy A Kiger
Journal:  Nat Rev Mol Cell Biol       Date:  2012-06-22       Impact factor: 94.444

3.  Coot: model-building tools for molecular graphics.

Authors:  Paul Emsley; Kevin Cowtan
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2004-11-26

4.  Crystal structure of rab11 in complex with rab11 family interacting protein 2.

Authors:  William N Jagoe; Andrew J Lindsay; Randy J Read; Airlie J McCoy; Mary W McCaffrey; Amir R Khan
Journal:  Structure       Date:  2006-08       Impact factor: 5.006

Review 5.  Rab11 proteins in health and disease.

Authors:  Eoin E Kelly; Conor P Horgan; Mary W McCaffrey
Journal:  Biochem Soc Trans       Date:  2012-12-01       Impact factor: 5.407

6.  A pharmacological map of the PI3-K family defines a role for p110alpha in insulin signaling.

Authors:  Zachary A Knight; Beatriz Gonzalez; Morri E Feldman; Eli R Zunder; David D Goldenberg; Olusegun Williams; Robbie Loewith; David Stokoe; Andras Balla; Balazs Toth; Tamas Balla; William A Weiss; Roger L Williams; Kevan M Shokat
Journal:  Cell       Date:  2006-04-27       Impact factor: 41.582

7.  The Buccaneer software for automated model building. 1. Tracing protein chains.

Authors:  Kevin Cowtan
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2006-08-19

8.  Phosphatidylinositol 4-kinase III beta is a target of enviroxime-like compounds for antipoliovirus activity.

Authors:  Minetaro Arita; Hirotatsu Kojima; Tetsuo Nagano; Takayoshi Okabe; Takaji Wakita; Hiroyuki Shimizu
Journal:  J Virol       Date:  2010-12-22       Impact factor: 6.549

9.  Oncogenic mutations mimic and enhance dynamic events in the natural activation of phosphoinositide 3-kinase p110α (PIK3CA).

Authors:  John E Burke; Olga Perisic; Glenn R Masson; Oscar Vadas; Roger L Williams
Journal:  Proc Natl Acad Sci U S A       Date:  2012-09-04       Impact factor: 11.205

10.  Targeting Plasmodium PI(4)K to eliminate malaria.

Authors:  Case W McNamara; Marcus Cs Lee; Chek Shik Lim; Siau Hoi Lim; Jason Roland; Oliver Simon; Bryan Ks Yeung; Arnab K Chatterjee; Susan L McCormack; Micah J Manary; Anne-Marie Zeeman; Koen J Dechering; Tr Santha Kumar; Philipp P Henrich; Kerstin Gagaring; Maureen Ibanez; Nobutaka Kato; Kelli L Kuhen; Christoph Fischli; Advait Nagle; Matthias Rottmann; David M Plouffe; Badry Bursulaya; Stephan Meister; Lucia Rameh; Joerg Trappe; Dorothea Haasen; Martijn Timmerman; Robert W Sauerwein; Rossarin Suwanarusk; Bruce Russell; Laurent Renia; Francois Nosten; David C Tully; Clemens Hm Kocken; Richard J Glynne; Christophe Bodenreider; David A Fidock; Thierry T Diagana; Elizabeth A Winzeler
Journal:  Nature       Date:  2013-11-27       Impact factor: 49.962

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  51 in total

1.  Structure of Rab11-FIP3-Rabin8 reveals simultaneous binding of FIP3 and Rabin8 effectors to Rab11.

Authors:  Melanie Vetter; Ralf Stehle; Claire Basquin; Esben Lorentzen
Journal:  Nat Struct Mol Biol       Date:  2015-08-10       Impact factor: 15.369

Review 2.  Dynamic structural biology at the protein membrane interface.

Authors:  John E Burke
Journal:  J Biol Chem       Date:  2019-01-28       Impact factor: 5.157

3.  The crystal structure of the phosphatidylinositol 4-kinase IIα.

Authors:  Adriana Baumlova; Dominika Chalupska; Bartosz Róźycki; Marko Jovic; Eva Wisniewski; Martin Klima; Anna Dubankova; Daniel P Kloer; Radim Nencka; Tamas Balla; Evzen Boura
Journal:  EMBO Rep       Date:  2014-08-28       Impact factor: 8.807

4.  Conformational control of small GTPases by AMPylation.

Authors:  Katja Barthelmes; Evelyn Ramcke; Hyun-Seo Kang; Michael Sattler; Aymelt Itzen
Journal:  Proc Natl Acad Sci U S A       Date:  2020-03-02       Impact factor: 11.205

5.  Conserved role for Gga proteins in phosphatidylinositol 4-kinase localization to the trans-Golgi network.

Authors:  Lydia Daboussi; Giancarlo Costaguta; Razmik Ghukasyan; Gregory S Payne
Journal:  Proc Natl Acad Sci U S A       Date:  2017-03-13       Impact factor: 11.205

Review 6.  Lipid Tales of Viral Replication and Transmission.

Authors:  Nihal Altan-Bonnet
Journal:  Trends Cell Biol       Date:  2016-11-09       Impact factor: 20.808

7.  Diversity-oriented synthesis yields novel multistage antimalarial inhibitors.

Authors:  Nobutaka Kato; Eamon Comer; Tomoyo Sakata-Kato; Arvind Sharma; Manmohan Sharma; Micah Maetani; Jessica Bastien; Nicolas M Brancucci; Joshua A Bittker; Victoria Corey; David Clarke; Emily R Derbyshire; Gillian L Dornan; Sandra Duffy; Sean Eckley; Maurice A Itoe; Karin M J Koolen; Timothy A Lewis; Ping S Lui; Amanda K Lukens; Emily Lund; Sandra March; Elamaran Meibalan; Bennett C Meier; Jacob A McPhail; Branko Mitasev; Eli L Moss; Morgane Sayes; Yvonne Van Gessel; Mathias J Wawer; Takashi Yoshinaga; Anne-Marie Zeeman; Vicky M Avery; Sangeeta N Bhatia; John E Burke; Flaminia Catteruccia; Jon C Clardy; Paul A Clemons; Koen J Dechering; Jeremy R Duvall; Michael A Foley; Fabian Gusovsky; Clemens H M Kocken; Matthias Marti; Marshall L Morningstar; Benito Munoz; Daniel E Neafsey; Amit Sharma; Elizabeth A Winzeler; Dyann F Wirth; Christina A Scherer; Stuart L Schreiber
Journal:  Nature       Date:  2016-09-07       Impact factor: 49.962

8.  Design and Structural Characterization of Potent and Selective Inhibitors of Phosphatidylinositol 4 Kinase IIIβ.

Authors:  Florentine U Rutaganira; Melissa L Fowler; Jacob A McPhail; Michael A Gelman; Khanh Nguyen; Anming Xiong; Gillian L Dornan; Brandon Tavshanjian; Jeffrey S Glenn; Kevan M Shokat; John E Burke
Journal:  J Med Chem       Date:  2016-02-26       Impact factor: 7.446

9.  A non-canonical GTPase interaction enables ORP1L-Rab7-RILP complex formation and late endosome positioning.

Authors:  Xinli Ma; Kai Liu; Jian Li; Huanhuan Li; Jun Li; Yingfang Liu; Chonglin Yang; Huanhuan Liang
Journal:  J Biol Chem       Date:  2018-07-16       Impact factor: 5.157

10.  RAB30 regulates PI4KB (phosphatidylinositol 4-kinase beta)-dependent autophagy against group A Streptococcus.

Authors:  Koji Nakajima; Takashi Nozawa; Atsuko Minowa-Nozawa; Hirotaka Toh; Shunsuke Yamada; Chihiro Aikawa; Ichiro Nakagawa
Journal:  Autophagy       Date:  2018-10-18       Impact factor: 16.016

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