| Literature DB >> 24860375 |
Nor Wahida Awang1, Siti Aishah Hasbullah1, Siti Fairus M Yusoff1, Bohari M Yamin2.
Abstract
In the title compound, C12H15FN2O2S, the mol-ecule adopts a cis configuration of the fluoro-benzoyl group with respect to the thiono group about their C-N bond. The dihedral angle between the fluoro-benzoyl group and the thio-urea N2CS fragment is 69.60 (11)°. An intra-molecular N-H⋯O hydrogen bond occurs. In the crystal, mol-ecules form chains along the b-axis direction via O-H⋯S and C-H⋯O hydrogen bonds.Entities:
Year: 2014 PMID: 24860375 PMCID: PMC4011211 DOI: 10.1107/S1600536814008174
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C12H15FN2O2S | |
| Orthorhombic, | Mo |
| Hall symbol: P 2ac 2ab | Cell parameters from 11689 reflections |
| θ = 3.1–28.2° | |
| µ = 0.25 mm−1 | |
| Block, colorless | |
| 0.50 × 0.50 × 0.29 mm |
| Bruker SMART APEX CCD area-detector diffractometer | 3290 independent reflections |
| Radiation source: fine-focus sealed tube | 2864 reflections with |
| Graphite monochromator | |
| ω scans | θmax = 28.2°, θmin = 3.1° |
| Absorption correction: multi-scan ( | |
| 21708 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max < 0.001 | |
| 3290 reflections | Δρmax = 0.22 e Å−3 |
| 168 parameters | Δρmin = −0.18 e Å−3 |
| 1 restraint | Absolute structure: Flack (1983), 1378 Friedel pairs |
| Primary atom site location: structure-invariant direct methods | Absolute structure parameter: −0.05 (8) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| F1 | −0.5492 (2) | 0.22048 (12) | 0.06124 (8) | 0.0690 (4) | |
| S1 | 0.25957 (10) | 0.08756 (4) | 0.35274 (3) | 0.05288 (15) | |
| O1 | 0.2778 (3) | 0.02641 (9) | 0.17285 (8) | 0.0537 (4) | |
| O2 | 0.0320 (2) | 0.39036 (10) | 0.21034 (9) | 0.0501 (3) | |
| H2A | −0.053 (3) | 0.4382 (14) | 0.2024 (14) | 0.067 (7)* | |
| N1 | 0.1564 (2) | 0.18174 (10) | 0.21762 (8) | 0.0369 (3) | |
| H1A | 0.0836 | 0.2359 | 0.2039 | 0.044* | |
| N2 | 0.3727 (2) | 0.27479 (10) | 0.30261 (8) | 0.0360 (3) | |
| C1 | −0.2089 (3) | 0.16654 (13) | 0.11163 (9) | 0.0382 (4) | |
| H1 | −0.2228 | 0.2134 | 0.1526 | 0.046* | |
| C2 | −0.3693 (3) | 0.15905 (16) | 0.05543 (10) | 0.0438 (4) | |
| C3 | −0.3574 (4) | 0.09202 (19) | −0.00610 (11) | 0.0556 (5) | |
| H3 | −0.4698 | 0.0890 | −0.0433 | 0.067* | |
| C4 | −0.1751 (4) | 0.02952 (18) | −0.01123 (13) | 0.0625 (6) | |
| H4 | −0.1633 | −0.0167 | −0.0526 | 0.075* | |
| C5 | −0.0084 (4) | 0.03385 (15) | 0.04385 (11) | 0.0497 (5) | |
| H5 | 0.1148 | −0.0091 | 0.0394 | 0.060* | |
| C6 | −0.0245 (3) | 0.10242 (12) | 0.10612 (10) | 0.0341 (3) | |
| C7 | 0.1516 (3) | 0.09866 (12) | 0.16784 (10) | 0.0349 (3) | |
| C8 | 0.2701 (3) | 0.18551 (11) | 0.28899 (10) | 0.0348 (3) | |
| C9 | 0.4712 (4) | 0.29815 (16) | 0.37932 (11) | 0.0546 (5) | |
| H9A | 0.3884 | 0.2621 | 0.4196 | 0.066* | |
| H9B | 0.4587 | 0.3717 | 0.3893 | 0.066* | |
| C10 | 0.7126 (4) | 0.26688 (19) | 0.38404 (16) | 0.0765 (8) | |
| H10A | 0.7259 | 0.1941 | 0.3743 | 0.115* | |
| H10B | 0.7690 | 0.2823 | 0.4352 | 0.115* | |
| H10C | 0.7964 | 0.3044 | 0.3456 | 0.115* | |
| C11 | 0.4091 (3) | 0.35433 (13) | 0.24232 (10) | 0.0366 (4) | |
| H11A | 0.4176 | 0.3211 | 0.1916 | 0.044* | |
| H11B | 0.5505 | 0.3879 | 0.2520 | 0.044* | |
| C12 | 0.2301 (4) | 0.43491 (12) | 0.24008 (11) | 0.0447 (4) | |
| H12A | 0.2041 | 0.4615 | 0.2923 | 0.054* | |
| H12B | 0.2760 | 0.4919 | 0.2070 | 0.054* |
| F1 | 0.0511 (7) | 0.0961 (10) | 0.0598 (7) | 0.0225 (7) | −0.0128 (6) | −0.0004 (7) |
| S1 | 0.0634 (3) | 0.0408 (2) | 0.0544 (3) | −0.0138 (2) | −0.0199 (3) | 0.0157 (2) |
| O1 | 0.0596 (9) | 0.0393 (6) | 0.0622 (8) | 0.0182 (7) | −0.0127 (7) | −0.0037 (6) |
| O2 | 0.0487 (8) | 0.0337 (7) | 0.0677 (9) | 0.0113 (6) | −0.0071 (7) | −0.0017 (6) |
| N1 | 0.0404 (8) | 0.0252 (6) | 0.0451 (8) | 0.0027 (6) | −0.0149 (6) | 0.0016 (6) |
| N2 | 0.0388 (8) | 0.0307 (7) | 0.0385 (7) | −0.0034 (6) | −0.0073 (6) | −0.0005 (6) |
| C1 | 0.0421 (10) | 0.0422 (8) | 0.0301 (7) | 0.0018 (8) | −0.0015 (7) | −0.0009 (6) |
| C2 | 0.0367 (9) | 0.0559 (11) | 0.0389 (9) | 0.0023 (8) | −0.0004 (8) | 0.0067 (8) |
| C3 | 0.0562 (12) | 0.0745 (14) | 0.0360 (9) | −0.0134 (12) | −0.0118 (9) | 0.0010 (10) |
| C4 | 0.0816 (17) | 0.0612 (13) | 0.0446 (11) | −0.0042 (13) | −0.0055 (11) | −0.0176 (10) |
| C5 | 0.0578 (12) | 0.0452 (10) | 0.0460 (11) | 0.0046 (9) | −0.0001 (9) | −0.0088 (9) |
| C6 | 0.0377 (8) | 0.0304 (8) | 0.0343 (8) | −0.0033 (7) | −0.0008 (7) | 0.0019 (6) |
| C7 | 0.0355 (8) | 0.0278 (7) | 0.0413 (9) | −0.0010 (7) | −0.0014 (7) | 0.0033 (6) |
| C8 | 0.0304 (8) | 0.0315 (7) | 0.0427 (8) | 0.0003 (7) | −0.0065 (7) | 0.0005 (6) |
| C9 | 0.0727 (14) | 0.0475 (11) | 0.0437 (10) | −0.0147 (10) | −0.0170 (10) | −0.0025 (9) |
| C10 | 0.0724 (17) | 0.0650 (14) | 0.0920 (17) | −0.0156 (13) | −0.0453 (15) | 0.0178 (13) |
| C11 | 0.0368 (9) | 0.0304 (8) | 0.0425 (9) | −0.0040 (7) | −0.0002 (7) | 0.0001 (7) |
| C12 | 0.0554 (12) | 0.0275 (7) | 0.0512 (10) | 0.0047 (9) | −0.0025 (10) | −0.0039 (7) |
| F1—C2 | 1.347 (2) | C4—C5 | 1.377 (3) |
| S1—C8 | 1.6736 (16) | C4—H4 | 0.9300 |
| O1—C7 | 1.208 (2) | C5—C6 | 1.390 (2) |
| O2—C12 | 1.419 (2) | C5—H5 | 0.9300 |
| O2—H2A | 0.816 (10) | C6—C7 | 1.497 (2) |
| N1—C7 | 1.372 (2) | C9—C10 | 1.511 (3) |
| N1—C8 | 1.401 (2) | C9—H9A | 0.9700 |
| N1—H1A | 0.8600 | C9—H9B | 0.9700 |
| N2—C8 | 1.331 (2) | C10—H10A | 0.9600 |
| N2—C9 | 1.471 (2) | C10—H10B | 0.9600 |
| N2—C11 | 1.474 (2) | C10—H10C | 0.9600 |
| C1—C2 | 1.366 (2) | C11—C12 | 1.500 (3) |
| C1—C6 | 1.389 (2) | C11—H11A | 0.9700 |
| C1—H1 | 0.9300 | C11—H11B | 0.9700 |
| C2—C3 | 1.366 (3) | C12—H12A | 0.9700 |
| C3—C4 | 1.366 (3) | C12—H12B | 0.9700 |
| C3—H3 | 0.9300 | ||
| C12—O2—H2A | 106.3 (18) | N2—C8—N1 | 114.19 (13) |
| C7—N1—C8 | 125.36 (13) | N2—C8—S1 | 124.15 (13) |
| C7—N1—H1A | 117.3 | N1—C8—S1 | 121.54 (12) |
| C8—N1—H1A | 117.3 | N2—C9—C10 | 112.35 (19) |
| C8—N2—C9 | 121.44 (15) | N2—C9—H9A | 109.1 |
| C8—N2—C11 | 123.58 (14) | C10—C9—H9A | 109.1 |
| C9—N2—C11 | 114.88 (14) | N2—C9—H9B | 109.1 |
| C2—C1—C6 | 118.34 (16) | C10—C9—H9B | 109.1 |
| C2—C1—H1 | 120.8 | H9A—C9—H9B | 107.9 |
| C6—C1—H1 | 120.8 | C9—C10—H10A | 109.5 |
| F1—C2—C3 | 118.29 (17) | C9—C10—H10B | 109.5 |
| F1—C2—C1 | 118.32 (16) | H10A—C10—H10B | 109.5 |
| C3—C2—C1 | 123.38 (18) | C9—C10—H10C | 109.5 |
| C2—C3—C4 | 117.89 (18) | H10A—C10—H10C | 109.5 |
| C2—C3—H3 | 121.1 | H10B—C10—H10C | 109.5 |
| C4—C3—H3 | 121.1 | N2—C11—C12 | 113.38 (15) |
| C3—C4—C5 | 121.14 (19) | N2—C11—H11A | 108.9 |
| C3—C4—H4 | 119.4 | C12—C11—H11A | 108.9 |
| C5—C4—H4 | 119.4 | N2—C11—H11B | 108.9 |
| C4—C5—C6 | 120.0 (2) | C12—C11—H11B | 108.9 |
| C4—C5—H5 | 120.0 | H11A—C11—H11B | 107.7 |
| C6—C5—H5 | 120.0 | O2—C12—C11 | 109.28 (13) |
| C1—C6—C5 | 119.29 (16) | O2—C12—H12A | 109.8 |
| C1—C6—C7 | 122.51 (15) | C11—C12—H12A | 109.8 |
| C5—C6—C7 | 118.06 (16) | O2—C12—H12B | 109.8 |
| O1—C7—N1 | 123.33 (15) | C11—C12—H12B | 109.8 |
| O1—C7—C6 | 121.38 (15) | H12A—C12—H12B | 108.3 |
| N1—C7—C6 | 115.29 (14) | ||
| C6—C1—C2—F1 | 179.31 (16) | C1—C6—C7—N1 | −18.5 (2) |
| C6—C1—C2—C3 | −0.2 (3) | C5—C6—C7—N1 | 165.87 (16) |
| F1—C2—C3—C4 | −179.56 (19) | C9—N2—C8—N1 | 170.60 (17) |
| C1—C2—C3—C4 | 0.0 (3) | C11—N2—C8—N1 | −13.3 (2) |
| C2—C3—C4—C5 | 0.0 (3) | C9—N2—C8—S1 | −5.4 (3) |
| C3—C4—C5—C6 | 0.2 (3) | C11—N2—C8—S1 | 170.74 (13) |
| C2—C1—C6—C5 | 0.5 (2) | C7—N1—C8—N2 | 139.06 (17) |
| C2—C1—C6—C7 | −175.11 (16) | C7—N1—C8—S1 | −44.8 (2) |
| C4—C5—C6—C1 | −0.5 (3) | C8—N2—C9—C10 | 91.8 (2) |
| C4—C5—C6—C7 | 175.31 (19) | C11—N2—C9—C10 | −84.6 (2) |
| C8—N1—C7—O1 | −14.3 (3) | C8—N2—C11—C12 | 93.48 (19) |
| C8—N1—C7—C6 | 165.10 (16) | C9—N2—C11—C12 | −90.17 (19) |
| C1—C6—C7—O1 | 160.93 (17) | N2—C11—C12—O2 | −70.51 (19) |
| C5—C6—C7—O1 | −14.7 (2) |
| H··· | ||||
| N1—H1 | 0.86 | 2.03 | 2.805 (2) | 150 |
| C9—H9 | 0.97 | 2.65 | 3.043 (3) | 105 |
| O2—H2 | 0.82 (3) | 2.49 (3) | 3.2805 (19) | 166 (3) |
| C11—H11 | 0.97 | 2.44 | 3.259 (3) | 142 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N1—H1 | 0.86 | 2.03 | 2.805 (2) | 150 |
| O2—H2 | 0.82 (3) | 2.49 (3) | 3.2805 (19) | 166 (3) |
| C11—H11 | 0.97 | 2.44 | 3.259 (3) | 142 |
Symmetry codes: (i) ; (ii) .