| Literature DB >> 24860369 |
Fırat Anĝay1, Omer Celik2, Orhan Barlık3, Mahmut Ulusoy3.
Abstract
In the title compound, C24H25N3, the benzimidazole ring system is essentially planar, with an r.m.s. deviation of 0.017 Å, and forms dihedral angles of 7.81 (5) and 87.61 (4)° with the pyridine and benzene rings, respectively. An intra-molecular C-H⋯N hydrogen bond is observed. In the crystal, mol-ecules are stacked along the a axis by weak C-H⋯π inter-actions.Entities:
Year: 2014 PMID: 24860369 PMCID: PMC4011285 DOI: 10.1107/S1600536814007934
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C24H25N3 | |
| Monoclinic, | Mo |
| Cell parameters from 1276 reflections | |
| θ = 2.3–31.5° | |
| µ = 0.07 mm−1 | |
| β = 97.699 (3)° | |
| Prism, yellow | |
| 0.25 × 0.20 × 0.15 mm |
| Bruker APEXII CCD diffractometer | 3056 reflections with |
| Radiation source: fine-focus sealed tube | |
| φ and ω scans | θmax = 26.0°, θmin = 2.3° |
| Absorption correction: multi-scan (Blessing, 1995) | |
| 25354 measured reflections | |
| 3741 independent reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 3741 reflections | (Δ/σ)max < 0.001 |
| 254 parameters | Δρmax = 0.24 e Å−3 |
| 0 restraints | Δρmin = −0.17 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| C1 | 1.0873 (5) | 0.86580 (11) | 0.44231 (14) | 0.0724 (6) | |
| H1 | 1.2174 | 0.8428 | 0.4246 | 0.087* | |
| C2 | 1.0060 (5) | 0.91952 (12) | 0.40152 (14) | 0.0737 (6) | |
| H2 | 1.0790 | 0.9327 | 0.3577 | 0.088* | |
| C3 | 0.8151 (5) | 0.95308 (12) | 0.42706 (16) | 0.0842 (7) | |
| H3 | 0.7548 | 0.9900 | 0.4011 | 0.101* | |
| C4 | 0.7133 (5) | 0.93151 (10) | 0.49165 (15) | 0.0771 (7) | |
| H4 | 0.5809 | 0.9535 | 0.5094 | 0.092* | |
| C5 | 0.8068 (3) | 0.87716 (7) | 0.53054 (11) | 0.0465 (4) | |
| C6 | 0.6926 (3) | 0.85653 (7) | 0.60059 (10) | 0.0452 (4) | |
| C7 | 0.4595 (4) | 0.86110 (8) | 0.69313 (11) | 0.0507 (4) | |
| C8 | 0.2891 (4) | 0.87790 (10) | 0.74483 (13) | 0.0658 (6) | |
| H8 | 0.2014 | 0.9161 | 0.7387 | 0.079* | |
| C9 | 0.2541 (4) | 0.83708 (10) | 0.80460 (13) | 0.0667 (6) | |
| H9 | 0.1414 | 0.8477 | 0.8396 | 0.080* | |
| C10 | 0.3850 (4) | 0.77962 (10) | 0.81392 (12) | 0.0598 (5) | |
| H10 | 0.3597 | 0.7531 | 0.8558 | 0.072* | |
| C11 | 0.5507 (4) | 0.76104 (9) | 0.76284 (10) | 0.0505 (4) | |
| H11 | 0.6360 | 0.7225 | 0.7690 | 0.061* | |
| C12 | 0.5841 (3) | 0.80251 (8) | 0.70185 (10) | 0.0432 (4) | |
| C13 | 0.8894 (3) | 0.74472 (7) | 0.62583 (10) | 0.0422 (4) | |
| H13A | 1.0264 | 0.7410 | 0.6691 | 0.051* | |
| H13B | 0.9632 | 0.7525 | 0.5777 | 0.051* | |
| C14 | 0.7459 (3) | 0.68215 (7) | 0.61734 (9) | 0.0370 (4) | |
| C15 | 0.5434 (3) | 0.67529 (7) | 0.55618 (9) | 0.0391 (4) | |
| C16 | 0.4047 (3) | 0.61901 (8) | 0.54888 (10) | 0.0452 (4) | |
| C17 | 0.4753 (3) | 0.56796 (8) | 0.59946 (11) | 0.0471 (4) | |
| C18 | 0.6838 (3) | 0.57318 (7) | 0.65801 (10) | 0.0448 (4) | |
| C19 | 0.8190 (3) | 0.63066 (7) | 0.66771 (10) | 0.0412 (4) | |
| C20 | 0.4783 (4) | 0.72858 (9) | 0.49769 (10) | 0.0511 (4) | |
| H20A | 0.406 (3) | 0.7111 (2) | 0.4472 (7) | 0.077* | |
| H20B | 0.630 (2) | 0.7521 (5) | 0.4912 (6) | 0.077* | |
| H20C | 0.357 (2) | 0.7567 (5) | 0.5172 (5) | 0.077* | |
| C21 | 0.1762 (4) | 0.61342 (11) | 0.48609 (14) | 0.0703 (6) | |
| H21A | 0.2254 (10) | 0.5965 (8) | 0.4399 (8) | 0.105* | |
| H21B | 0.106 (2) | 0.6535 (6) | 0.4754 (8) | 0.105* | |
| H21C | 0.057 (2) | 0.5868 (8) | 0.5043 (5) | 0.105* | |
| C22 | 0.3235 (5) | 0.50692 (10) | 0.59025 (15) | 0.0710 (6) | |
| H22A | 0.314 (3) | 0.4923 (5) | 0.5373 (9) | 0.107* | |
| H22B | 0.158 (3) | 0.5146 (2) | 0.6025 (10) | 0.107* | |
| H22C | 0.403 (2) | 0.4757 (5) | 0.6251 (9) | 0.107* | |
| C23 | 0.7616 (5) | 0.51661 (9) | 0.71064 (13) | 0.0655 (6) | |
| H23A | 0.626 (2) | 0.5047 (5) | 0.7383 (8) | 0.098* | |
| H23B | 0.904 (3) | 0.5276 (3) | 0.7476 (8) | 0.098* | |
| H23C | 0.803 (3) | 0.4820 (6) | 0.6790 (5) | 0.098* | |
| C24 | 1.0435 (4) | 0.63574 (10) | 0.73176 (13) | 0.0630 (5) | |
| H24A | 1.168 (2) | 0.6592 (7) | 0.7134 (4) | 0.094* | |
| H24B | 1.104 (2) | 0.5960 (6) | 0.7452 (7) | 0.094* | |
| H24C | 0.9950 (10) | 0.6551 (7) | 0.7754 (7) | 0.094* | |
| N1 | 0.9926 (3) | 0.84413 (8) | 0.50574 (10) | 0.0616 (4) | |
| N2 | 0.5315 (3) | 0.89400 (7) | 0.63031 (10) | 0.0561 (4) | |
| N3 | 0.7309 (3) | 0.79969 (6) | 0.64092 (8) | 0.0406 (3) |
| C1 | 0.0797 (15) | 0.0651 (13) | 0.0780 (14) | 0.0052 (11) | 0.0312 (12) | 0.0205 (11) |
| C2 | 0.0844 (16) | 0.0737 (14) | 0.0641 (13) | −0.0104 (12) | 0.0138 (12) | 0.0232 (11) |
| C3 | 0.1041 (19) | 0.0620 (14) | 0.0871 (17) | 0.0111 (13) | 0.0152 (15) | 0.0351 (13) |
| C4 | 0.0940 (17) | 0.0516 (12) | 0.0889 (16) | 0.0184 (11) | 0.0244 (14) | 0.0216 (11) |
| C5 | 0.0539 (10) | 0.0329 (8) | 0.0517 (10) | −0.0066 (7) | 0.0031 (8) | 0.0006 (7) |
| C6 | 0.0522 (10) | 0.0305 (8) | 0.0519 (10) | −0.0019 (7) | 0.0034 (8) | −0.0032 (7) |
| C7 | 0.0580 (11) | 0.0396 (9) | 0.0551 (10) | −0.0025 (8) | 0.0099 (9) | −0.0119 (8) |
| C8 | 0.0756 (14) | 0.0522 (11) | 0.0726 (13) | 0.0050 (10) | 0.0212 (11) | −0.0188 (10) |
| C9 | 0.0737 (14) | 0.0657 (13) | 0.0651 (13) | −0.0053 (11) | 0.0261 (11) | −0.0210 (11) |
| C10 | 0.0732 (13) | 0.0590 (11) | 0.0490 (10) | −0.0122 (10) | 0.0152 (9) | −0.0084 (9) |
| C11 | 0.0582 (11) | 0.0457 (9) | 0.0476 (10) | −0.0050 (8) | 0.0070 (8) | −0.0042 (7) |
| C12 | 0.0451 (9) | 0.0397 (8) | 0.0442 (9) | −0.0072 (7) | 0.0038 (7) | −0.0087 (7) |
| C13 | 0.0405 (9) | 0.0345 (8) | 0.0514 (9) | 0.0012 (6) | 0.0059 (7) | 0.0014 (7) |
| C14 | 0.0395 (8) | 0.0319 (7) | 0.0407 (8) | 0.0008 (6) | 0.0096 (6) | −0.0031 (6) |
| C15 | 0.0416 (8) | 0.0382 (8) | 0.0389 (8) | 0.0030 (6) | 0.0108 (7) | −0.0045 (6) |
| C16 | 0.0441 (9) | 0.0449 (9) | 0.0479 (9) | −0.0036 (7) | 0.0108 (7) | −0.0122 (7) |
| C17 | 0.0536 (10) | 0.0381 (9) | 0.0538 (10) | −0.0077 (7) | 0.0227 (8) | −0.0116 (7) |
| C18 | 0.0574 (10) | 0.0339 (8) | 0.0473 (9) | 0.0041 (7) | 0.0230 (8) | −0.0003 (7) |
| C19 | 0.0453 (9) | 0.0367 (8) | 0.0426 (8) | 0.0044 (7) | 0.0094 (7) | 0.0000 (6) |
| C20 | 0.0573 (11) | 0.0504 (10) | 0.0441 (9) | 0.0048 (8) | 0.0010 (8) | 0.0003 (8) |
| C21 | 0.0589 (12) | 0.0747 (14) | 0.0738 (14) | −0.0118 (11) | −0.0033 (11) | −0.0163 (11) |
| C22 | 0.0808 (15) | 0.0505 (11) | 0.0862 (15) | −0.0231 (10) | 0.0274 (12) | −0.0111 (10) |
| C23 | 0.0940 (16) | 0.0398 (10) | 0.0665 (13) | 0.0052 (10) | 0.0247 (11) | 0.0093 (9) |
| C24 | 0.0675 (13) | 0.0540 (11) | 0.0624 (12) | 0.0037 (9) | −0.0094 (10) | 0.0093 (9) |
| N1 | 0.0691 (10) | 0.0521 (9) | 0.0671 (10) | 0.0057 (8) | 0.0216 (8) | 0.0180 (8) |
| N2 | 0.0697 (10) | 0.0346 (7) | 0.0650 (10) | 0.0040 (7) | 0.0129 (8) | −0.0039 (7) |
| N3 | 0.0456 (7) | 0.0305 (6) | 0.0455 (7) | −0.0029 (5) | 0.0056 (6) | −0.0021 (5) |
| C1—N1 | 1.334 (3) | C13—H13B | 0.9700 |
| C1—C2 | 1.368 (3) | C14—C19 | 1.405 (2) |
| C1—H1 | 0.9300 | C14—C15 | 1.406 (2) |
| C2—C3 | 1.360 (4) | C15—C16 | 1.395 (2) |
| C2—H2 | 0.9300 | C15—C20 | 1.510 (2) |
| C3—C4 | 1.369 (3) | C16—C17 | 1.398 (3) |
| C3—H3 | 0.9300 | C16—C21 | 1.517 (3) |
| C4—C5 | 1.382 (3) | C17—C18 | 1.397 (3) |
| C4—H4 | 0.9300 | C17—C22 | 1.517 (2) |
| C5—N1 | 1.328 (2) | C18—C19 | 1.408 (2) |
| C5—C6 | 1.477 (3) | C18—C23 | 1.515 (2) |
| C6—N2 | 1.319 (2) | C19—C24 | 1.514 (3) |
| C6—N3 | 1.382 (2) | C20—H20A | 0.968 (12) |
| C7—N2 | 1.373 (2) | C20—H20B | 0.968 (13) |
| C7—C8 | 1.395 (3) | C20—H20C | 0.968 (12) |
| C7—C12 | 1.401 (2) | C21—H21A | 0.933 (14) |
| C8—C9 | 1.365 (3) | C21—H21B | 0.933 (14) |
| C8—H8 | 0.9300 | C21—H21C | 0.933 (14) |
| C9—C10 | 1.396 (3) | C22—H22A | 0.948 (14) |
| C9—H9 | 0.9300 | C22—H22B | 0.948 (14) |
| C10—C11 | 1.379 (3) | C22—H22C | 0.948 (14) |
| C10—H10 | 0.9300 | C23—H23A | 0.951 (14) |
| C11—C12 | 1.387 (2) | C23—H23B | 0.951 (14) |
| C11—H11 | 0.9300 | C23—H23C | 0.951 (13) |
| C12—N3 | 1.384 (2) | C24—H24A | 0.915 (14) |
| C13—N3 | 1.478 (2) | C24—H24B | 0.915 (13) |
| C13—C14 | 1.522 (2) | C24—H24C | 0.915 (13) |
| C13—H13A | 0.9700 | ||
| N1—C1—C2 | 124.4 (2) | C15—C16—C17 | 120.14 (16) |
| N1—C1—H1 | 117.8 | C15—C16—C21 | 119.82 (17) |
| C2—C1—H1 | 117.8 | C17—C16—C21 | 120.05 (16) |
| C3—C2—C1 | 117.9 (2) | C18—C17—C16 | 120.23 (15) |
| C3—C2—H2 | 121.0 | C18—C17—C22 | 120.34 (17) |
| C1—C2—H2 | 121.0 | C16—C17—C22 | 119.42 (18) |
| C2—C3—C4 | 118.7 (2) | C17—C18—C19 | 119.95 (15) |
| C2—C3—H3 | 120.6 | C17—C18—C23 | 119.35 (16) |
| C4—C3—H3 | 120.6 | C19—C18—C23 | 120.69 (17) |
| C3—C4—C5 | 120.2 (2) | C14—C19—C18 | 119.69 (15) |
| C3—C4—H4 | 119.9 | C14—C19—C24 | 120.95 (15) |
| C5—C4—H4 | 119.9 | C18—C19—C24 | 119.35 (15) |
| N1—C5—C4 | 121.30 (19) | C15—C20—H20A | 109.5 |
| N1—C5—C6 | 120.74 (15) | C15—C20—H20B | 109.5 |
| C4—C5—C6 | 117.96 (18) | H20A—C20—H20B | 109.5 |
| N2—C6—N3 | 112.86 (16) | C15—C20—H20C | 109.5 |
| N2—C6—C5 | 119.77 (15) | H20A—C20—H20C | 109.5 |
| N3—C6—C5 | 127.37 (15) | H20B—C20—H20C | 109.5 |
| N2—C7—C8 | 129.74 (18) | C16—C21—H21A | 109.5 |
| N2—C7—C12 | 110.39 (16) | C16—C21—H21B | 109.5 |
| C8—C7—C12 | 119.87 (18) | H21A—C21—H21B | 109.5 |
| C9—C8—C7 | 118.6 (2) | C16—C21—H21C | 109.5 |
| C9—C8—H8 | 120.7 | H21A—C21—H21C | 109.5 |
| C7—C8—H8 | 120.7 | H21B—C21—H21C | 109.5 |
| C8—C9—C10 | 120.93 (19) | C17—C22—H22A | 109.5 |
| C8—C9—H9 | 119.5 | C17—C22—H22B | 109.5 |
| C10—C9—H9 | 119.5 | H22A—C22—H22B | 109.5 |
| C11—C10—C9 | 121.92 (19) | C17—C22—H22C | 109.5 |
| C11—C10—H10 | 119.0 | H22A—C22—H22C | 109.5 |
| C9—C10—H10 | 119.0 | H22B—C22—H22C | 109.5 |
| C10—C11—C12 | 116.88 (18) | C18—C23—H23A | 109.5 |
| C10—C11—H11 | 121.6 | C18—C23—H23B | 109.5 |
| C12—C11—H11 | 121.6 | H23A—C23—H23B | 109.5 |
| N3—C12—C11 | 132.66 (16) | C18—C23—H23C | 109.5 |
| N3—C12—C7 | 105.53 (15) | H23A—C23—H23C | 109.5 |
| C11—C12—C7 | 121.80 (17) | H23B—C23—H23C | 109.5 |
| N3—C13—C14 | 113.67 (13) | C19—C24—H24A | 109.5 |
| N3—C13—H13A | 108.8 | C19—C24—H24B | 109.5 |
| C14—C13—H13A | 108.8 | H24A—C24—H24B | 109.5 |
| N3—C13—H13B | 108.8 | C19—C24—H24C | 109.5 |
| C14—C13—H13B | 108.8 | H24A—C24—H24C | 109.5 |
| H13A—C13—H13B | 107.7 | H24B—C24—H24C | 109.5 |
| C19—C14—C15 | 119.78 (14) | C5—N1—C1 | 117.39 (17) |
| C19—C14—C13 | 120.99 (14) | C6—N2—C7 | 105.26 (15) |
| C15—C14—C13 | 119.19 (14) | C6—N3—C12 | 105.94 (13) |
| C16—C15—C14 | 120.06 (15) | C6—N3—C13 | 129.98 (14) |
| C16—C15—C20 | 119.99 (15) | C12—N3—C13 | 124.08 (13) |
| C14—C15—C20 | 119.95 (14) | ||
| N1—C1—C2—C3 | −0.2 (4) | C15—C16—C17—C22 | −179.52 (16) |
| C1—C2—C3—C4 | −0.3 (4) | C21—C16—C17—C22 | 0.7 (3) |
| C2—C3—C4—C5 | 1.0 (4) | C16—C17—C18—C19 | 1.9 (2) |
| C3—C4—C5—N1 | −1.2 (4) | C22—C17—C18—C19 | −178.06 (16) |
| C3—C4—C5—C6 | 179.1 (2) | C16—C17—C18—C23 | −178.23 (16) |
| N1—C5—C6—N2 | 171.36 (17) | C22—C17—C18—C23 | 1.8 (2) |
| C4—C5—C6—N2 | −9.0 (3) | C15—C14—C19—C18 | −1.9 (2) |
| N1—C5—C6—N3 | −9.7 (3) | C13—C14—C19—C18 | −179.49 (14) |
| C4—C5—C6—N3 | 169.96 (19) | C15—C14—C19—C24 | 177.28 (16) |
| N2—C7—C8—C9 | −178.4 (2) | C13—C14—C19—C24 | −0.3 (2) |
| C12—C7—C8—C9 | 1.9 (3) | C17—C18—C19—C14 | −1.2 (2) |
| C7—C8—C9—C10 | −0.1 (3) | C23—C18—C19—C14 | 178.93 (15) |
| C8—C9—C10—C11 | −1.2 (3) | C17—C18—C19—C24 | 179.62 (16) |
| C9—C10—C11—C12 | 0.7 (3) | C23—C18—C19—C24 | −0.3 (2) |
| C10—C11—C12—N3 | −179.82 (17) | C4—C5—N1—C1 | 0.7 (3) |
| C10—C11—C12—C7 | 1.1 (3) | C6—C5—N1—C1 | −179.67 (18) |
| N2—C7—C12—N3 | −1.48 (19) | C2—C1—N1—C5 | 0.1 (4) |
| C8—C7—C12—N3 | 178.23 (17) | N3—C6—N2—C7 | 0.2 (2) |
| N2—C7—C12—C11 | 177.79 (16) | C5—C6—N2—C7 | 179.26 (15) |
| C8—C7—C12—C11 | −2.5 (3) | C8—C7—N2—C6 | −178.8 (2) |
| N3—C13—C14—C19 | −121.53 (16) | C12—C7—N2—C6 | 0.8 (2) |
| N3—C13—C14—C15 | 60.88 (19) | N2—C6—N3—C12 | −1.10 (19) |
| C19—C14—C15—C16 | 4.3 (2) | C5—C6—N3—C12 | 179.91 (16) |
| C13—C14—C15—C16 | −178.05 (14) | N2—C6—N3—C13 | 178.34 (15) |
| C19—C14—C15—C20 | −174.84 (15) | C5—C6—N3—C13 | −0.7 (3) |
| C13—C14—C15—C20 | 2.8 (2) | C11—C12—N3—C6 | −177.65 (18) |
| C14—C15—C16—C17 | −3.6 (2) | C7—C12—N3—C6 | 1.50 (17) |
| C20—C15—C16—C17 | 175.52 (15) | C11—C12—N3—C13 | 2.9 (3) |
| C14—C15—C16—C21 | 176.10 (16) | C7—C12—N3—C13 | −177.98 (14) |
| C20—C15—C16—C21 | −4.7 (2) | C14—C13—N3—C6 | −125.33 (17) |
| C15—C16—C17—C18 | 0.5 (2) | C14—C13—N3—C12 | 54.0 (2) |
| C21—C16—C17—C18 | −179.21 (16) |
| H··· | ||||
| C13—H13 | 0.97 | 2.91 | 3.6941 (18) | 139 |
| C13—H13 | 0.97 | 2.30 | 3.029 (2) | 131 |
Hydrogen-bond geometry (Å, °)
Cg is the centroid of the C7–C12 benzene ring.
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| C13—H13 | 0.97 | 2.91 | 3.6941 (18) | 139 |
| C13—H13 | 0.97 | 2.30 | 3.029 (2) | 131 |
Symmetry code: (i) .