Literature DB >> 24860359

(E)-3-Isopropyl-1-methyl-2,6-di-phenyl-piperidin-4-one O-nicotinoyl oxime.

T Vinuchakkaravarthy1, R Sivakumar2, T Srinivasan1, V Thanikachalam2, D Velmurugan1.   

Abstract

In the title compound, C27H29N3O2, the piperidine ring exists in a chair conformation with an equatorial orientation of the phenyl and methyl substituents. The C-C=N bond angles are significantly different [119.1 (2) and 127.2 (2)°]. The phenyl rings are inclined to one another by 44.90 (14)°, and by 80.85 (13) and 79.62 (12)° to the mean plane of the piperidine ring. The terminal pyridine ring is inclined to the piperidine ring mean plane by 74.79 (15)°. In the crystal, mol-ecules are linked by C-H⋯π inter-actions, forming a three-dimensional network.

Entities:  

Year:  2014        PMID: 24860359      PMCID: PMC4011261          DOI: 10.1107/S1600536814007363

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis and biological activity of piperidin-4-one derivatives, see, for example: Parthiban et al. (2009 ▶); Narayanan et al. (2012 ▶). For the crystal structures of very similar compounds, see: Vinuchakkaravarthy et al. (2013a ▶,b ▶). For ring puckering parameters, see: Cremer & Pople (1975 ▶); Nardelli (1983 ▶).

Experimental

Crystal data

C27H29N3O2 M = 427.53 Orthorhombic, a = 12.7717 (6) Å b = 16.2765 (7) Å c = 11.4109 (9) Å V = 2372.1 (2) Å3 Z = 4 Mo Kα radiation μ = 0.08 mm−1 T = 293 K 0.20 × 0.20 × 0.20 mm

Data collection

Bruker SMART APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2008 ▶) T min = 0.491, T max = 0.746 11654 measured reflections 5117 independent reflections 2975 reflections with I > 2σ(I) R int = 0.045

Refinement

R[F 2 > 2σ(F 2)] = 0.047 wR(F 2) = 0.132 S = 1.03 5117 reflections 292 parameters 1 restraint H-atom parameters constrained Δρmax = 0.15 e Å−3 Δρmin = −0.14 e Å−3 Data collection: APEX2 (Bruker, 2008 ▶); cell refinement: SAINT (Bruker, 2008 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶); software used to prepare material for publication: SHELXL97 and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536814007363/su2680sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814007363/su2680Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S1600536814007363/su2680Isup3.cml CCDC reference: 995062 Additional supporting information: crystallographic information; 3D view; checkCIF report
C27H29N3O2F(000) = 912
Mr = 427.53Dx = 1.197 Mg m3
Orthorhombic, Pna21Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2c -2nCell parameters from 5117 reflections
a = 12.7717 (6) Åθ = 2.0–28.3°
b = 16.2765 (7) ŵ = 0.08 mm1
c = 11.4109 (9) ÅT = 293 K
V = 2372.1 (2) Å3Block, colourless
Z = 40.20 × 0.20 × 0.20 mm
Bruker SMART APEXII CCD diffractometer5117 independent reflections
Radiation source: fine-focus sealed tube2975 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.045
ω amd φ scansθmax = 28.3°, θmin = 2.0°
Absorption correction: multi-scan (SADABS; Bruker, 2008)h = −16→14
Tmin = 0.491, Tmax = 0.746k = −21→16
11654 measured reflectionsl = −12→15
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.047Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.132H-atom parameters constrained
S = 1.03w = 1/[σ2(Fo2) + (0.0556P)2 + 0.1257P] where P = (Fo2 + 2Fc2)/3
5117 reflections(Δ/σ)max < 0.001
292 parametersΔρmax = 0.15 e Å3
1 restraintΔρmin = −0.14 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.20093 (18)0.54079 (15)0.4090 (2)0.0521 (6)
H10.19200.58540.35230.063*
C20.29009 (17)0.48375 (15)0.3647 (2)0.0540 (6)
H20.29690.44050.42400.065*
C30.39055 (18)0.53079 (15)0.3689 (2)0.0512 (6)
C40.41492 (19)0.56519 (17)0.4867 (2)0.0563 (6)
H4A0.47960.59630.48320.068*
H4B0.42410.52080.54250.068*
C50.32572 (18)0.62083 (15)0.5264 (2)0.0509 (6)
H50.32160.66770.47270.061*
C60.09879 (17)0.49393 (16)0.4170 (2)0.0547 (6)
C70.0836 (2)0.43621 (18)0.5037 (2)0.0648 (7)
H70.13610.42670.55850.078*
C8−0.0087 (2)0.39242 (19)0.5100 (3)0.0775 (9)
H8−0.01780.35340.56880.093*
C9−0.0869 (2)0.4060 (2)0.4306 (4)0.0844 (10)
H9−0.14920.37650.43550.101*
C10−0.0733 (2)0.4626 (2)0.3444 (3)0.0864 (10)
H10−0.12590.47130.28940.104*
C110.0187 (2)0.5076 (2)0.3384 (3)0.0729 (8)
H110.02650.54750.28070.087*
C120.2629 (2)0.43909 (18)0.2496 (3)0.0656 (7)
H120.19520.41250.26280.079*
C130.3406 (2)0.3698 (2)0.2243 (4)0.0901 (11)
H13A0.31680.33860.15800.135*
H13B0.34560.33450.29140.135*
H13C0.40820.39280.20750.135*
C140.2487 (2)0.4935 (2)0.1429 (3)0.0937 (10)
H14A0.31580.51270.11670.141*
H14B0.20540.53960.16300.141*
H14C0.21590.46250.08140.141*
C150.5761 (2)0.62544 (18)0.2066 (3)0.0616 (7)
C160.6794 (2)0.66287 (17)0.2345 (3)0.0655 (8)
C170.7231 (3)0.7185 (2)0.1568 (4)0.0922 (10)
H170.68830.73290.08830.111*
C180.8190 (4)0.7520 (2)0.1830 (4)0.1076 (14)
H180.84970.79060.13380.129*
C190.8680 (3)0.7271 (3)0.2831 (5)0.1080 (14)
H190.93360.74920.29890.130*
N30.8297 (2)0.67423 (19)0.3587 (3)0.1028 (10)
C210.7358 (3)0.64310 (19)0.3324 (3)0.0793 (9)
H210.70670.60540.38430.095*
C220.35138 (17)0.65246 (16)0.6471 (2)0.0532 (6)
C230.3903 (2)0.73080 (17)0.6616 (3)0.0643 (7)
H230.39440.76590.59750.077*
C240.4232 (2)0.7578 (2)0.7699 (3)0.0749 (8)
H240.44910.81090.77810.090*
C250.4180 (2)0.7075 (2)0.8649 (3)0.0792 (9)
H250.44080.72590.93770.095*
C260.3788 (2)0.6292 (2)0.8524 (3)0.0748 (8)
H260.37430.59480.91730.090*
C270.34641 (19)0.60174 (18)0.7443 (2)0.0615 (7)
H270.32090.54850.73640.074*
C280.1417 (2)0.63578 (19)0.5558 (3)0.0726 (8)
H28A0.15670.65920.63110.109*
H28B0.07580.60750.55880.109*
H28C0.13840.67870.49820.109*
N10.22489 (14)0.57741 (12)0.52408 (17)0.0523 (5)
N20.44194 (16)0.54136 (15)0.27484 (19)0.0606 (6)
O10.53751 (13)0.58708 (12)0.29990 (16)0.0637 (5)
O20.53326 (18)0.63179 (16)0.1144 (2)0.0924 (7)
U11U22U33U12U13U23
C10.0479 (13)0.0507 (15)0.0576 (15)0.0025 (11)−0.0069 (11)−0.0015 (11)
C20.0462 (13)0.0553 (15)0.0607 (15)0.0013 (11)0.0002 (11)−0.0026 (13)
C30.0453 (12)0.0525 (15)0.0556 (14)0.0039 (10)−0.0006 (11)−0.0039 (12)
C40.0454 (13)0.0680 (18)0.0554 (14)−0.0058 (12)−0.0026 (11)−0.0015 (12)
C50.0535 (14)0.0458 (14)0.0536 (13)−0.0060 (11)−0.0033 (11)0.0019 (11)
C60.0440 (14)0.0579 (16)0.0623 (15)0.0045 (11)−0.0007 (11)−0.0118 (13)
C70.0552 (15)0.073 (2)0.0660 (18)−0.0035 (14)0.0046 (12)−0.0131 (15)
C80.0678 (19)0.075 (2)0.090 (2)−0.0116 (16)0.0204 (17)−0.0194 (17)
C90.0539 (18)0.084 (3)0.115 (3)−0.0101 (16)0.0090 (19)−0.034 (2)
C100.0494 (16)0.096 (3)0.113 (3)0.0037 (17)−0.0174 (17)−0.031 (2)
C110.0577 (16)0.075 (2)0.086 (2)0.0084 (15)−0.0131 (14)−0.0123 (16)
C120.0518 (15)0.0688 (19)0.0762 (18)−0.0028 (13)−0.0025 (13)−0.0221 (15)
C130.069 (2)0.081 (2)0.120 (3)0.0027 (16)0.0055 (18)−0.042 (2)
C140.088 (2)0.125 (3)0.0678 (19)0.015 (2)−0.0179 (16)−0.019 (2)
C150.0657 (16)0.0581 (18)0.0611 (17)0.0092 (14)0.0157 (14)0.0019 (13)
C160.0666 (17)0.0517 (17)0.0781 (19)−0.0034 (13)0.0257 (16)−0.0086 (14)
C170.098 (3)0.081 (2)0.097 (2)−0.005 (2)0.035 (2)0.0062 (19)
C180.119 (3)0.086 (3)0.118 (4)−0.035 (2)0.053 (3)−0.003 (2)
C190.096 (3)0.093 (3)0.135 (4)−0.039 (2)0.039 (3)−0.032 (3)
N30.0872 (19)0.095 (2)0.126 (3)−0.0257 (17)−0.0013 (19)−0.019 (2)
C210.080 (2)0.071 (2)0.087 (2)−0.0186 (17)0.0047 (17)−0.0029 (17)
C220.0451 (13)0.0557 (16)0.0589 (15)0.0005 (11)−0.0003 (11)−0.0035 (12)
C230.0682 (16)0.0553 (17)0.0694 (17)−0.0019 (14)−0.0091 (13)−0.0013 (13)
C240.0781 (19)0.064 (2)0.083 (2)−0.0002 (15)−0.0138 (15)−0.0186 (17)
C250.083 (2)0.092 (3)0.0635 (18)0.0030 (17)−0.0075 (16)−0.0227 (18)
C260.0719 (17)0.097 (3)0.0553 (16)0.0007 (16)0.0053 (14)0.0051 (16)
C270.0590 (16)0.0676 (19)0.0580 (16)−0.0072 (13)0.0066 (12)0.0030 (14)
C280.0561 (15)0.0680 (19)0.094 (2)0.0086 (14)−0.0002 (14)−0.0209 (15)
N10.0442 (10)0.0519 (13)0.0608 (12)0.0003 (9)−0.0013 (9)−0.0066 (10)
N20.0501 (12)0.0657 (15)0.0660 (14)−0.0036 (10)−0.0007 (10)−0.0088 (11)
O10.0567 (10)0.0744 (13)0.0601 (11)−0.0105 (9)0.0055 (8)−0.0032 (9)
O20.0921 (15)0.1099 (19)0.0752 (16)−0.0005 (13)−0.0031 (12)0.0219 (13)
C1—N11.474 (3)C14—H14A0.9600
C1—C61.514 (3)C14—H14B0.9600
C1—C21.554 (3)C14—H14C0.9600
C1—H10.9800C15—O21.189 (3)
C2—C31.495 (3)C15—O11.329 (3)
C2—C121.541 (4)C15—C161.488 (4)
C2—H20.9800C16—C211.367 (4)
C3—N21.270 (3)C16—C171.385 (4)
C3—C41.489 (3)C17—C181.372 (5)
C4—C51.524 (4)C17—H170.9300
C4—H4A0.9700C18—C191.363 (6)
C4—H4B0.9700C18—H180.9300
C5—N11.469 (3)C19—N31.313 (5)
C5—C221.507 (3)C19—H190.9300
C5—H50.9800N3—C211.336 (4)
C6—C111.378 (4)C21—H210.9300
C6—C71.378 (4)C22—C231.378 (4)
C7—C81.379 (4)C22—C271.383 (4)
C7—H70.9300C23—C241.377 (4)
C8—C91.366 (5)C23—H230.9300
C8—H80.9300C24—C251.360 (4)
C9—C101.360 (5)C24—H240.9300
C9—H90.9300C25—C261.377 (4)
C10—C111.387 (4)C25—H250.9300
C10—H100.9300C26—C271.377 (4)
C11—H110.9300C26—H260.9300
C12—C141.516 (5)C27—H270.9300
C12—C131.529 (4)C28—N11.471 (3)
C12—H120.9800C28—H28A0.9600
C13—H13A0.9600C28—H28B0.9600
C13—H13B0.9600C28—H28C0.9600
C13—H13C0.9600N2—O11.458 (3)
N1—C1—C6109.24 (19)H13B—C13—H13C109.5
N1—C1—C2112.30 (18)C12—C14—H14A109.5
C6—C1—C2110.48 (19)C12—C14—H14B109.5
N1—C1—H1108.2H14A—C14—H14B109.5
C6—C1—H1108.2C12—C14—H14C109.5
C2—C1—H1108.2H14A—C14—H14C109.5
C3—C2—C12117.5 (2)H14B—C14—H14C109.5
C3—C2—C1108.21 (19)O2—C15—O1125.3 (3)
C12—C2—C1113.24 (19)O2—C15—C16124.2 (3)
C3—C2—H2105.6O1—C15—C16110.5 (3)
C12—C2—H2105.6C21—C16—C17117.7 (3)
C1—C2—H2105.6C21—C16—C15123.1 (3)
N2—C3—C4127.2 (2)C17—C16—C15119.2 (3)
N2—C3—C2119.1 (2)C18—C17—C16118.7 (4)
C4—C3—C2113.6 (2)C18—C17—H17120.7
C3—C4—C5109.6 (2)C16—C17—H17120.7
C3—C4—H4A109.7C19—C18—C17118.3 (4)
C5—C4—H4A109.7C19—C18—H18120.9
C3—C4—H4B109.7C17—C18—H18120.9
C5—C4—H4B109.7N3—C19—C18125.0 (4)
H4A—C4—H4B108.2N3—C19—H19117.5
N1—C5—C22111.80 (19)C18—C19—H19117.5
N1—C5—C4111.34 (19)C19—N3—C21115.8 (4)
C22—C5—C4108.20 (19)N3—C21—C16124.5 (3)
N1—C5—H5108.5N3—C21—H21117.7
C22—C5—H5108.5C16—C21—H21117.7
C4—C5—H5108.5C23—C22—C27118.2 (2)
C11—C6—C7118.2 (2)C23—C22—C5120.3 (2)
C11—C6—C1121.3 (3)C27—C22—C5121.2 (2)
C7—C6—C1120.5 (2)C24—C23—C22120.8 (3)
C6—C7—C8120.7 (3)C24—C23—H23119.6
C6—C7—H7119.7C22—C23—H23119.6
C8—C7—H7119.7C25—C24—C23120.6 (3)
C9—C8—C7120.4 (3)C25—C24—H24119.7
C9—C8—H8119.8C23—C24—H24119.7
C7—C8—H8119.8C24—C25—C26119.5 (3)
C10—C9—C8119.8 (3)C24—C25—H25120.2
C10—C9—H9120.1C26—C25—H25120.2
C8—C9—H9120.1C27—C26—C25120.2 (3)
C9—C10—C11120.1 (3)C27—C26—H26119.9
C9—C10—H10119.9C25—C26—H26119.9
C11—C10—H10119.9C26—C27—C22120.7 (3)
C6—C11—C10120.8 (3)C26—C27—H27119.6
C6—C11—H11119.6C22—C27—H27119.6
C10—C11—H11119.6N1—C28—H28A109.5
C14—C12—C13110.9 (3)N1—C28—H28B109.5
C14—C12—C2115.9 (2)H28A—C28—H28B109.5
C13—C12—C2111.3 (2)N1—C28—H28C109.5
C14—C12—H12106.0H28A—C28—H28C109.5
C13—C12—H12106.0H28B—C28—H28C109.5
C2—C12—H12106.0C5—N1—C28108.55 (19)
C12—C13—H13A109.5C5—N1—C1113.11 (18)
C12—C13—H13B109.5C28—N1—C1109.30 (19)
H13A—C13—H13B109.5C3—N2—O1109.64 (19)
C12—C13—H13C109.5C15—O1—N2113.1 (2)
H13A—C13—H13C109.5
N1—C1—C2—C3−52.7 (3)C15—C16—C17—C18−179.3 (3)
C6—C1—C2—C3−174.9 (2)C16—C17—C18—C191.8 (5)
N1—C1—C2—C12175.2 (2)C17—C18—C19—N3−1.5 (6)
C6—C1—C2—C1252.9 (3)C18—C19—N3—C210.7 (6)
C12—C2—C3—N29.3 (3)C19—N3—C21—C16−0.2 (5)
C1—C2—C3—N2−120.5 (2)C17—C16—C21—N30.5 (5)
C12—C2—C3—C4−174.6 (2)C15—C16—C21—N3178.5 (3)
C1—C2—C3—C455.7 (3)N1—C5—C22—C23−135.9 (2)
N2—C3—C4—C5118.2 (3)C4—C5—C22—C23101.1 (3)
C2—C3—C4—C5−57.6 (3)N1—C5—C22—C2750.4 (3)
C3—C4—C5—N155.1 (3)C4—C5—C22—C27−72.5 (3)
C3—C4—C5—C22178.3 (2)C27—C22—C23—C24−0.1 (4)
N1—C1—C6—C11128.0 (2)C5—C22—C23—C24−173.9 (2)
C2—C1—C6—C11−108.0 (3)C22—C23—C24—C250.1 (5)
N1—C1—C6—C7−51.9 (3)C23—C24—C25—C26−0.5 (5)
C2—C1—C6—C772.1 (3)C24—C25—C26—C270.8 (5)
C11—C6—C7—C81.2 (4)C25—C26—C27—C22−0.8 (4)
C1—C6—C7—C8−178.9 (2)C23—C22—C27—C260.4 (4)
C6—C7—C8—C9−0.4 (4)C5—C22—C27—C26174.2 (2)
C7—C8—C9—C100.4 (5)C22—C5—N1—C2862.5 (3)
C8—C9—C10—C11−1.2 (5)C4—C5—N1—C28−176.4 (2)
C7—C6—C11—C10−2.0 (4)C22—C5—N1—C1−176.0 (2)
C1—C6—C11—C10178.1 (3)C4—C5—N1—C1−54.9 (2)
C9—C10—C11—C62.0 (4)C6—C1—N1—C5177.12 (19)
C3—C2—C12—C14−62.2 (3)C2—C1—N1—C554.2 (3)
C1—C2—C12—C1465.2 (3)C6—C1—N1—C28−61.8 (3)
C3—C2—C12—C1365.7 (3)C2—C1—N1—C28175.2 (2)
C1—C2—C12—C13−167.0 (2)C4—C3—N2—O15.6 (3)
O2—C15—C16—C21−168.0 (3)C2—C3—N2—O1−178.9 (2)
O1—C15—C16—C2114.4 (4)O2—C15—O1—N28.8 (4)
O2—C15—C16—C1710.0 (4)C16—C15—O1—N2−173.59 (19)
O1—C15—C16—C17−167.7 (3)C3—N2—O1—C15−157.5 (2)
C21—C16—C17—C18−1.3 (5)
D—H···AD—HH···AD···AD—H···A
C24—H24···Cg1i0.932.873.700 (4)150
C13—H13C···Cg2ii0.962.953.620 (3)128
Table 1

Hydrogen-bond geometry (Å, °)

Cg1 and Cg2 are the centroids of rings C6–C11 and C22–C27, respectively.

D—H⋯A D—HH⋯A DA D—H⋯A
C24—H24⋯Cg1i 0.932.873.700 (4)150
C13—H13CCg2ii 0.962.953.620 (3)128

Symmetry codes: (i) ; (ii) .

  6 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Design, synthesis, spectral and biological evaluation of novel 1-allyl substituted 2,6-diphenylpiperidin-4-ones and its derivatives of oximes/oxime ethers.

Authors:  Kuppusamy Narayanan; Mani Shanmugam; Sarangan Jothivel; Senthamaraikannan Kabilan
Journal:  Bioorg Med Chem Lett       Date:  2012-09-13       Impact factor: 2.823

3.  Synthesis, spectral, crystal and antimicrobial studies of biologically potent oxime ethers of nitrogen, oxygen and sulfur heterocycles.

Authors:  Paramasivam Parthiban; Gopalakrishnan Aridoss; Paramasivam Rathika; Venkatachalam Ramkumar; Senthamaraikannan Kabilan
Journal:  Bioorg Med Chem Lett       Date:  2009-04-18       Impact factor: 2.823

4.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20

5.  [(4E)-3-Ethyl-1-methyl-2,6-di-phenyl-piperidin-4-yl-idene]amino 3-methyl-benzoate.

Authors:  T Vinuchakkaravarthy; R Sivakumar; T Srinivasan; V Thanikachalam; D Velmurugan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-09-18

6.  [(4E)-1-Methyl-2,6-diphenyl-3-(propan-2-yl)piperidin-4-yl-idene]amino 3-methyl-benzoate.

Authors:  T Vinuchakkaravarthy; R Sivakumar; T Srinivasan; V Thanikachalam; D Velmurugan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-07-20
  6 in total
  1 in total

1.  Crystal structures of (E)-(3-ethyl-1-methyl-2,6-di-phenyl-piperidin-4-yl-idene)amino phenyl carbonate and (E)-(3-isopropyl-1-methyl-2,6-di-phenyl-piperidin-4-yl-idene)amino phenyl carbonate.

Authors:  B Raghuvarman; R Sivakumar; V Thanikachalam; S Aravindhan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-09-13
  1 in total

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