Literature DB >> 24860358

(Z)-N-[1-(Aziridin-1-yl)-2,2,2-tri-fluoro-ethyl-idene]-4-bromo-aniline.

Alexander S Bunev1, Maksim A Vasiliev1, Gennady I Ostapenko1, Alexander S Peregudov2, Victor N Khrustalev3.   

Abstract

The title compound, C10H8BrF3N2, crystallizes with two independent mol-ecules in the asymmetric unit, which can be considered as being related by a pseudo-inversion center, so their conformations are different; the corresponding N=C-N-C torsion angles are 54.6 (5) and -50.5 (5)°. In the crystal, mol-ecules related by translation in [001] inter-act through short inter-molecular Br⋯F contacts [3.276 (2) and 3.284 (2) Å], thus forming two types of crystallographically independent chains.

Entities:  

Year:  2014        PMID: 24860358      PMCID: PMC4011223          DOI: 10.1107/S1600536814007867

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For applications of aziridines, see: Tanner (1994 ▶); Remers & Iyengar (1995 ▶); Armstrong et al. (1996 ▶); Katoh et al. (1996 ▶); Schirmeister (1999a ▶,b ▶); McCoull & Davis (2000 ▶). For the crystal structures of related compounds, see: Chinnakali et al. (1998 ▶); McLaren & Sweeney (1999 ▶); Zhu et al. (2006 ▶); Moragas Solà et al. (2010 ▶).

Experimental

Crystal data

C10H8BrF3N2 M = 293.09 Monoclinic, a = 11.642 (2) Å b = 8.5455 (16) Å c = 11.846 (2) Å β = 116.106 (3)° V = 1058.3 (3) Å3 Z = 4 Mo Kα radiation μ = 3.90 mm−1 T = 120 K 0.30 × 0.25 × 0.25 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2003 ▶) T min = 0.388, T max = 0.442 13846 measured reflections 6146 independent reflections 5186 reflections with I > 2σ(I) R int = 0.043

Refinement

R[F 2 > 2σ(F 2)] = 0.047 wR(F 2) = 0.118 S = 1.01 6146 reflections 289 parameters 1 restraint H-atom parameters constrained Δρmax = 1.97 e Å−3 Δρmin = −0.86 e Å−3 Absolute structure: Flack (1983 ▶), 2866 Friedel pairs Absolute structure parameter: 0.025 (11) Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: SAINT (Bruker, 2001 ▶); data reduction: SAINT (Bruker, 2001 ▶); program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL (Sheldrick, 2008 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536814007867/cv5449sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814007867/cv5449Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S1600536814007867/cv5449Isup3.cml CCDC reference: 996162 Additional supporting information: crystallographic information; 3D view; checkCIF report
C10H8BrF3N2F(000) = 576
Mr = 293.09Dx = 1.840 Mg m3
Monoclinic, P21Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ybCell parameters from 4691 reflections
a = 11.642 (2) Åθ = 3.1–29.9°
b = 8.5455 (16) ŵ = 3.90 mm1
c = 11.846 (2) ÅT = 120 K
β = 116.106 (3)°Prism, colourless
V = 1058.3 (3) Å30.30 × 0.25 × 0.25 mm
Z = 4
Bruker APEXII CCD diffractometer6146 independent reflections
Radiation source: fine-focus sealed tube5186 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.043
φ and ω scansθmax = 30.0°, θmin = 1.9°
Absorption correction: multi-scan (SADABS; Bruker, 2003)h = −16→16
Tmin = 0.388, Tmax = 0.442k = −12→11
13846 measured reflectionsl = −16→16
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.047H-atom parameters constrained
wR(F2) = 0.118w = 1/[σ2(Fo2) + (0.0665P)2] where P = (Fo2 + 2Fc2)/3
S = 1.01(Δ/σ)max = 0.001
6146 reflectionsΔρmax = 1.97 e Å3
289 parametersΔρmin = −0.86 e Å3
1 restraintAbsolute structure: Flack (1983), 2866 Friedel pairs
Primary atom site location: structure-invariant direct methodsAbsolute structure parameter: 0.025 (11)
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Br10.11522 (3)0.26312 (4)1.18963 (3)0.03080 (7)
F10.09963 (18)0.2247 (3)0.45774 (18)0.0409 (5)
F2−0.0174 (2)0.4285 (3)0.3927 (2)0.0451 (5)
F3−0.1028 (2)0.2017 (3)0.35005 (19)0.0444 (6)
N10.0732 (2)0.2970 (3)0.6606 (2)0.0273 (6)
N2−0.1541 (2)0.2779 (3)0.5405 (2)0.0275 (5)
C1−0.0288 (3)0.2907 (3)0.5599 (3)0.0251 (6)
C2−0.0130 (3)0.2852 (4)0.4393 (3)0.0295 (7)
C3−0.2122 (3)0.3864 (4)0.5954 (3)0.0319 (7)
H3A−0.16070.47710.64280.038*
H3B−0.27030.34260.62830.038*
C4−0.2560 (3)0.3829 (4)0.4556 (3)0.0345 (8)
H4A−0.34080.33670.40240.041*
H4B−0.23110.47130.41700.041*
C50.0744 (3)0.2934 (4)0.7808 (3)0.0255 (6)
C6−0.0055 (3)0.1941 (4)0.8088 (3)0.0283 (7)
H6−0.06830.13270.74430.034*
C70.0070 (3)0.1857 (4)0.9306 (3)0.0285 (7)
H7−0.04660.11830.95020.034*
C80.0988 (2)0.2770 (4)1.0237 (3)0.0267 (6)
C90.1785 (3)0.3738 (4)0.9972 (3)0.0274 (6)
H90.24060.43581.06190.033*
C100.1679 (3)0.3806 (4)0.8765 (3)0.0279 (7)
H100.22450.44480.85870.034*
Br20.42565 (3)0.56843 (4)0.34093 (3)0.03331 (7)
F40.6460 (2)0.5903 (4)1.18097 (19)0.0506 (6)
F50.44343 (19)0.6038 (3)1.07301 (19)0.0455 (6)
F60.5344 (2)0.3820 (3)1.1287 (2)0.0497 (6)
N30.4603 (2)0.5260 (3)0.8663 (2)0.0261 (6)
N40.6881 (2)0.5003 (3)0.9894 (2)0.0273 (6)
C110.5624 (3)0.5129 (4)0.9676 (3)0.0241 (6)
C120.5469 (3)0.5233 (4)1.0885 (3)0.0293 (7)
C130.7334 (3)0.3884 (4)0.9255 (3)0.0320 (7)
H13A0.79940.42380.89990.038*
H13B0.67100.31240.86770.038*
C140.7710 (3)0.3724 (4)1.0628 (3)0.0342 (8)
H14A0.73180.28661.09010.041*
H14B0.86030.39821.12220.041*
C150.4617 (3)0.5305 (3)0.7482 (3)0.0242 (6)
C160.5513 (3)0.6135 (4)0.7248 (3)0.0284 (7)
H160.62050.66340.79230.034*
C170.5408 (3)0.6246 (4)0.6031 (3)0.0283 (7)
H170.60230.68130.58720.034*
C180.4399 (3)0.5519 (4)0.5065 (3)0.0263 (6)
C190.3487 (3)0.4687 (4)0.5270 (3)0.0294 (7)
H190.28020.41840.45920.035*
C200.3586 (3)0.4601 (4)0.6479 (3)0.0280 (7)
H200.29520.40610.66270.034*
U11U22U33U12U13U23
Br10.02611 (10)0.03998 (15)0.02471 (11)0.00583 (12)0.00971 (9)0.00366 (12)
F10.0358 (8)0.0569 (14)0.0337 (8)0.0102 (8)0.0188 (7)0.0010 (8)
F20.0660 (11)0.0346 (11)0.0429 (9)0.0019 (9)0.0315 (9)0.0065 (8)
F30.0423 (10)0.0577 (13)0.0293 (8)−0.0130 (10)0.0122 (8)−0.0137 (9)
N10.0243 (9)0.0302 (13)0.0260 (10)−0.0010 (9)0.0099 (8)−0.0010 (9)
N20.0209 (9)0.0305 (12)0.0267 (10)−0.0031 (10)0.0066 (8)−0.0002 (10)
C10.0245 (10)0.0251 (14)0.0239 (11)−0.0043 (10)0.0088 (9)−0.0046 (10)
C20.0301 (12)0.0265 (15)0.0278 (12)−0.0035 (11)0.0090 (10)−0.0042 (11)
C30.0260 (12)0.0347 (16)0.0347 (14)0.0017 (12)0.0130 (11)−0.0019 (12)
C40.0251 (12)0.0389 (17)0.0343 (14)0.0007 (13)0.0082 (11)0.0002 (13)
C50.0211 (10)0.0302 (15)0.0234 (11)0.0010 (10)0.0082 (9)0.0009 (10)
C60.0250 (12)0.0275 (14)0.0305 (13)−0.0021 (11)0.0104 (10)−0.0007 (11)
C70.0291 (12)0.0238 (14)0.0307 (13)−0.0041 (11)0.0112 (11)0.0021 (11)
C80.0255 (10)0.0297 (14)0.0276 (11)0.0030 (12)0.0143 (9)0.0019 (11)
C90.0192 (11)0.0283 (14)0.0300 (13)−0.0010 (10)0.0064 (10)−0.0046 (11)
C100.0201 (10)0.0293 (14)0.0321 (13)−0.0019 (11)0.0093 (10)0.0018 (12)
Br20.03588 (13)0.03795 (15)0.02514 (11)0.00254 (13)0.01254 (10)0.00202 (12)
F40.0362 (9)0.0816 (18)0.0296 (8)−0.0126 (11)0.0106 (7)−0.0142 (11)
F50.0434 (9)0.0601 (15)0.0381 (9)0.0166 (10)0.0227 (8)0.0032 (9)
F60.0759 (12)0.0382 (11)0.0497 (10)0.0016 (11)0.0411 (9)0.0083 (9)
N30.0213 (9)0.0281 (13)0.0247 (10)−0.0008 (9)0.0064 (8)0.0010 (9)
N40.0192 (9)0.0300 (12)0.0285 (11)0.0033 (9)0.0067 (9)0.0002 (10)
C110.0231 (11)0.0207 (12)0.0267 (12)−0.0004 (10)0.0093 (10)−0.0006 (10)
C120.0237 (12)0.0372 (16)0.0232 (12)0.0025 (11)0.0068 (10)−0.0014 (11)
C130.0301 (12)0.0297 (15)0.0361 (14)0.0028 (12)0.0144 (11)−0.0051 (12)
C140.0228 (12)0.0367 (16)0.0347 (15)0.0057 (12)0.0049 (11)0.0074 (13)
C150.0184 (10)0.0257 (14)0.0260 (11)0.0019 (9)0.0073 (9)0.0011 (10)
C160.0234 (11)0.0303 (15)0.0285 (12)−0.0025 (10)0.0088 (10)−0.0019 (11)
C170.0232 (11)0.0294 (14)0.0301 (13)0.0018 (11)0.0095 (10)0.0076 (11)
C180.0234 (11)0.0309 (15)0.0221 (11)0.0038 (11)0.0077 (9)0.0029 (11)
C190.0215 (11)0.0363 (16)0.0274 (12)−0.0006 (11)0.0080 (10)−0.0029 (12)
C200.0186 (10)0.0313 (14)0.0302 (13)−0.0033 (11)0.0073 (10)−0.0033 (12)
Br1—C81.893 (3)Br2—C181.899 (3)
F1—C21.335 (4)F4—C121.322 (4)
F2—C21.335 (4)F5—C121.328 (4)
F3—C21.322 (4)F6—C121.329 (4)
N1—C11.261 (3)N3—C111.269 (4)
N1—C51.418 (4)N3—C151.407 (4)
N2—C11.377 (4)N4—C111.373 (4)
N2—C31.459 (4)N4—C131.456 (4)
N2—C41.474 (4)N4—C141.464 (4)
C1—C21.520 (4)C11—C121.522 (5)
C3—C41.504 (5)C13—C141.493 (5)
C3—H3A0.9900C13—H13A0.9900
C3—H3B0.9900C13—H13B0.9900
C4—H4A0.9900C14—H14A0.9900
C4—H4B0.9900C14—H14B0.9900
C5—C101.392 (4)C15—C161.387 (4)
C5—C61.403 (5)C15—C201.399 (4)
C6—C71.387 (5)C16—C171.396 (5)
C6—H60.9500C16—H160.9500
C7—C81.389 (4)C17—C181.375 (4)
C7—H70.9500C17—H170.9500
C8—C91.378 (4)C18—C191.386 (5)
C9—C101.382 (4)C19—C201.387 (5)
C9—H90.9500C19—H190.9500
C10—H100.9500C20—H200.9500
C1—N1—C5122.5 (3)C11—N3—C15121.8 (3)
C1—N2—C3122.7 (3)C11—N4—C13123.6 (3)
C1—N2—C4122.7 (3)C11—N4—C14122.7 (3)
C3—N2—C461.7 (2)C13—N4—C1461.5 (2)
N1—C1—N2130.5 (3)N3—C11—N4131.5 (3)
N1—C1—C2115.9 (3)N3—C11—C12115.8 (3)
N2—C1—C2113.4 (2)N4—C11—C12112.6 (2)
F3—C2—F2107.0 (2)F4—C12—F5107.3 (3)
F3—C2—F1107.2 (3)F4—C12—F6106.8 (3)
F2—C2—F1106.2 (3)F5—C12—F6106.5 (3)
F3—C2—C1112.8 (3)F4—C12—C11112.6 (3)
F2—C2—C1111.2 (3)F5—C12—C11112.1 (2)
F1—C2—C1112.0 (2)F6—C12—C11111.2 (3)
N2—C3—C459.7 (2)N4—C13—C1459.5 (2)
N2—C3—H3A117.8N4—C13—H13A117.8
C4—C3—H3A117.8C14—C13—H13A117.8
N2—C3—H3B117.8N4—C13—H13B117.8
C4—C3—H3B117.8C14—C13—H13B117.8
H3A—C3—H3B114.9H13A—C13—H13B115.0
N2—C4—C358.6 (2)N4—C14—C1359.0 (2)
N2—C4—H4A117.9N4—C14—H14A117.9
C3—C4—H4A117.9C13—C14—H14A117.9
N2—C4—H4B117.9N4—C14—H14B117.9
C3—C4—H4B117.9C13—C14—H14B117.9
H4A—C4—H4B115.1H14A—C14—H14B115.0
C10—C5—C6119.6 (3)C16—C15—C20119.3 (3)
C10—C5—N1117.7 (3)C16—C15—N3123.4 (3)
C6—C5—N1122.4 (3)C20—C15—N3116.9 (3)
C7—C6—C5120.0 (3)C15—C16—C17120.6 (3)
C7—C6—H6120.0C15—C16—H16119.7
C5—C6—H6120.0C17—C16—H16119.7
C6—C7—C8119.3 (3)C18—C17—C16118.9 (3)
C6—C7—H7120.4C18—C17—H17120.5
C8—C7—H7120.4C16—C17—H17120.5
C9—C8—C7121.1 (3)C17—C18—C19121.7 (3)
C9—C8—Br1120.2 (2)C17—C18—Br2118.7 (2)
C7—C8—Br1118.7 (2)C19—C18—Br2119.6 (2)
C8—C9—C10119.9 (3)C18—C19—C20119.1 (3)
C8—C9—H9120.1C18—C19—H19120.5
C10—C9—H9120.1C20—C19—H19120.5
C9—C10—C5120.2 (3)C19—C20—C15120.3 (3)
C9—C10—H10119.9C19—C20—H20119.9
C5—C10—H10119.9C15—C20—H20119.9
C5—N1—C1—N2−0.8 (5)C15—N3—C11—N4−0.2 (5)
C5—N1—C1—C2−176.2 (3)C15—N3—C11—C12175.1 (3)
C3—N2—C1—N154.6 (5)C13—N4—C11—N3−50.5 (5)
C4—N2—C1—N1129.6 (4)C14—N4—C11—N3−125.8 (4)
C3—N2—C1—C2−130.0 (3)C13—N4—C11—C12134.1 (3)
C4—N2—C1—C2−54.9 (4)C14—N4—C11—C1258.8 (4)
N1—C1—C2—F3146.9 (3)N3—C11—C12—F4−146.2 (3)
N2—C1—C2—F3−29.3 (4)N4—C11—C12—F430.0 (4)
N1—C1—C2—F2−92.9 (3)N3—C11—C12—F5−25.1 (4)
N2—C1—C2—F291.0 (3)N4—C11—C12—F5151.1 (3)
N1—C1—C2—F125.8 (4)N3—C11—C12—F694.0 (3)
N2—C1—C2—F1−150.3 (3)N4—C11—C12—F6−89.9 (3)
C1—N2—C3—C4112.6 (3)C11—N4—C13—C14−112.2 (3)
C1—N2—C4—C3−112.5 (3)C11—N4—C14—C13113.6 (3)
C1—N1—C5—C10−145.7 (3)C11—N3—C15—C16−41.6 (4)
C1—N1—C5—C640.9 (4)C11—N3—C15—C20145.2 (3)
C10—C5—C6—C71.3 (5)C20—C15—C16—C17−1.3 (5)
N1—C5—C6—C7174.6 (3)N3—C15—C16—C17−174.3 (3)
C5—C6—C7—C80.3 (5)C15—C16—C17—C180.1 (5)
C6—C7—C8—C9−0.9 (5)C16—C17—C18—C190.2 (5)
C6—C7—C8—Br1−179.6 (2)C16—C17—C18—Br2179.6 (2)
C7—C8—C9—C10−0.2 (5)C17—C18—C19—C200.7 (5)
Br1—C8—C9—C10178.5 (2)Br2—C18—C19—C20−178.7 (2)
C8—C9—C10—C51.9 (5)C18—C19—C20—C15−1.9 (5)
C6—C5—C10—C9−2.5 (5)C16—C15—C20—C192.2 (5)
N1—C5—C10—C9−176.0 (3)N3—C15—C20—C19175.7 (3)
  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Inhibition of cysteine proteases by peptides containing aziridine-2,3-dicarboxylic acid building blocks.

Authors:  T Schirmeister
Journal:  Biopolymers       Date:  1999       Impact factor: 2.505

3.  New peptidic cysteine protease inhibitors derived from the electrophilic alpha-amino acid aziridine-2,3-dicarboxylic acid.

Authors:  T Schirmeister
Journal:  J Med Chem       Date:  1999-02-25       Impact factor: 7.446

4.  (2S)-2-[(2S*,5R*,6R*)-5,6-Dimeth-oxy-5,6-dimethyl-1,4-dioxan-2-yl]-1-[(S)-1,1-dimethyl-ethylsulfon-yl]aziridine.

Authors:  Toni Moragas Solà; William Lewis; Sampada V Bettigeri; Robert A Stockman; David C Forbes
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-11-27
  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.