Literature DB >> 24860322

Bis(4-hy-droxy-3-meth-oxy-benzaldehyde 4-phenyl-thio-semicarbazonato-N (1),S)nickel(II).

Adriano Bof de Oliveira1, Bárbara Regina Santos Feitosa1, Christian Näther2, Inke Jess2.   

Abstract

In the title compound, [Ni(C15n class="Species">H14N3O2S)2], the Ni(II) atom lies on a center of symmetry. The deprotonated ligands act as N,S-donors, forming five-membered metalla-rings. The Ni(II) atom is four-coordinated in a slightly distorted square-planar environment. In the crystal, the discrete complex mol-ecules are linked by weak N-H⋯O hydrogen bonds, generating chains along [110]. The chains are further connected via weak O-H⋯N inter-actions into a layered network extending parallel to (001).

Entities:  

Year:  2014        PMID: 24860322      PMCID: PMC4011249          DOI: 10.1107/S1600536814009027

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the crystal structure of the ligand, see: Oliveira et al. (2013 ▶). For the crystal structure of a similar complex, see: Akinchan & Abram (2000 ▶). For the coordination chemistry of thio­semicarbazone compounds, see: Lobana et al. (2009 ▶).

Experimental

Crystal data

[Ni(C15n class="Species">H14N3O2S)2] M = 659.41 Triclinic, a = 6.8080 (4) Å b = 7.5569 (4) Å c = 14.3902 (8) Å α = 98.514 (4)° β = 92.062 (5)° γ = 102.698 (5)° V = 712.47 (7) Å3 Z = 1 Mo Kα radiation μ = 0.88 mm−1 T = 200 K 0.12 × 0.08 × 0.04 mm

Data collection

Stoe IPDS-1 diffractometer Absorption correction: numerical (X-SHAPE and X-RED32; Stoe & Cie, 2008 ▶) T min = 0.800, T max = 0.936 3117 measured reflections 2539 independent reflections 2539 reflections with I > 2σ(I) R int = 0.033

Refinement

R[F 2 > 2σ(F 2)] = 0.030 wR(F 2) = 0.080 S = 1.06 3117 reflections 206 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.33 e Å−3 Δρmin = −0.19 e Å−3 Data collection: X-AREA (Stoe & Cie, 2008 ▶); cell refinement: X-AREA; data reduction: X-RED32 (Stoe & Cie, 2008 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: DIAMOND (Brandenburg, 2006 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) I. DOI: 10.1107/S1600536814009027/lr2126sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814009027/lr2126Isup2.hkl CCDC reference: 998671 Additional supporting information: crystallographic information; 3D view; checkCIF report
[Ni(C15H14N3O2S)2]V = 712.47 (7) Å3
Mr = 659.41Z = 1
Triclinic, P1F(000) = 342
Hall symbol: -P 1Dx = 1.537 Mg m3
a = 6.8080 (4) ÅMo Kα radiation, λ = 0.71073 Å
b = 7.5569 (4) Åθ = 1.4–27.0°
c = 14.3902 (8) ŵ = 0.88 mm1
α = 98.514 (4)°T = 200 K
β = 92.062 (5)°Prism, red
γ = 102.698 (5)°0.12 × 0.08 × 0.04 mm
Stoe IPDS-1 diffractometer2539 independent reflections
Radiation source: fine-focus sealed tube, Stoe IPDS-12539 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.033
φ scansθmax = 27.0°, θmin = 1.4°
Absorption correction: numerical (X-SHAPE and X-RED32; Stoe & Cie, 2008)h = −8→8
Tmin = 0.800, Tmax = 0.936k = −9→9
3117 measured reflectionsl = −18→16
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.030Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.080H atoms treated by a mixture of independent and constrained refinement
S = 1.06w = 1/[σ2(Fo2) + (0.0482P)2 + 0.0121P] where P = (Fo2 + 2Fc2)/3
3117 reflections(Δ/σ)max < 0.001
206 parametersΔρmax = 0.33 e Å3
0 restraintsΔρmin = −0.19 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Ni10.50001.00000.00000.02742 (11)
C10.1523 (3)0.8520 (2)0.32101 (13)0.0331 (4)
C20.3262 (3)0.8457 (3)0.37156 (15)0.0435 (5)
H20.45370.87890.34630.052*
C30.3138 (4)0.7905 (3)0.45971 (16)0.0516 (6)
H30.43380.78740.49460.062*
C40.1309 (5)0.7404 (4)0.49672 (18)0.0651 (7)
H40.12330.70250.55680.078*
C5−0.0420 (5)0.7461 (5)0.4453 (2)0.0808 (10)
H5−0.16970.71120.47010.097*
C6−0.0314 (4)0.8019 (4)0.35813 (18)0.0580 (6)
H6−0.15160.80580.32360.070*
N10.1511 (3)0.9162 (2)0.23399 (12)0.0329 (3)
H1N10.056 (4)0.957 (3)0.2191 (18)0.051 (7)*
C70.2813 (3)0.9123 (2)0.16455 (13)0.0281 (4)
S10.21900 (7)1.00329 (7)0.06685 (3)0.03549 (13)
N20.4377 (2)0.8401 (2)0.17166 (11)0.0312 (3)
N30.5427 (2)0.8441 (2)0.08926 (11)0.0300 (3)
C80.6613 (3)0.7309 (3)0.07729 (14)0.0337 (4)
H80.739 (3)0.737 (3)0.0244 (16)0.035 (5)*
C90.6955 (3)0.5875 (2)0.12971 (13)0.0317 (4)
C100.8662 (3)0.5206 (3)0.10650 (14)0.0364 (4)
H100.95380.57600.06370.044*
C110.9096 (3)0.3751 (3)0.14491 (14)0.0362 (4)
H111.02600.33070.12860.043*
C120.7829 (3)0.2951 (2)0.20690 (14)0.0322 (4)
C130.6150 (3)0.3636 (2)0.23340 (13)0.0302 (4)
C140.5702 (3)0.5083 (2)0.19495 (13)0.0315 (4)
H140.45520.55390.21260.038*
O10.8234 (2)0.14835 (19)0.24410 (11)0.0411 (3)
H1O10.71740.08960.26350.062*
O20.5064 (2)0.27403 (18)0.29749 (10)0.0392 (3)
C150.3366 (4)0.3391 (3)0.33051 (18)0.0478 (5)
H15A0.38160.46550.36370.072*
H15B0.26880.26040.37360.072*
H15C0.24230.33620.27690.072*
U11U22U33U12U13U23
Ni10.03166 (19)0.03038 (17)0.02632 (18)0.01380 (13)0.00733 (13)0.01269 (13)
C10.0424 (11)0.0294 (8)0.0300 (10)0.0098 (8)0.0091 (8)0.0086 (7)
C20.0491 (12)0.0518 (12)0.0369 (11)0.0196 (10)0.0086 (9)0.0170 (9)
C30.0757 (17)0.0529 (12)0.0328 (11)0.0258 (12)0.0006 (11)0.0125 (10)
C40.094 (2)0.0699 (16)0.0338 (12)0.0125 (15)0.0135 (14)0.0237 (12)
C50.073 (2)0.120 (3)0.0497 (16)0.0017 (18)0.0235 (15)0.0408 (17)
C60.0508 (14)0.0816 (17)0.0419 (13)0.0049 (12)0.0113 (11)0.0246 (12)
N10.0338 (8)0.0393 (8)0.0330 (8)0.0168 (7)0.0097 (7)0.0155 (7)
C70.0309 (9)0.0265 (8)0.0288 (9)0.0073 (7)0.0057 (7)0.0092 (7)
S10.0338 (3)0.0491 (3)0.0333 (3)0.0198 (2)0.0090 (2)0.0209 (2)
N20.0375 (8)0.0353 (8)0.0285 (8)0.0173 (7)0.0103 (7)0.0140 (6)
N30.0349 (8)0.0322 (7)0.0281 (8)0.0136 (6)0.0083 (6)0.0114 (6)
C80.0405 (10)0.0369 (9)0.0320 (10)0.0188 (8)0.0123 (8)0.0149 (8)
C90.0377 (10)0.0332 (9)0.0302 (9)0.0166 (8)0.0069 (8)0.0106 (7)
C100.0432 (11)0.0371 (9)0.0360 (10)0.0180 (8)0.0142 (9)0.0127 (8)
C110.0366 (10)0.0402 (10)0.0393 (11)0.0204 (8)0.0094 (8)0.0118 (8)
C120.0360 (10)0.0306 (8)0.0347 (10)0.0137 (7)0.0011 (8)0.0114 (7)
C130.0334 (9)0.0293 (8)0.0303 (9)0.0091 (7)0.0043 (8)0.0096 (7)
C140.0343 (9)0.0308 (8)0.0351 (10)0.0152 (7)0.0067 (8)0.0112 (7)
O10.0414 (8)0.0405 (7)0.0524 (9)0.0213 (6)0.0094 (7)0.0239 (6)
O20.0418 (8)0.0387 (7)0.0475 (8)0.0176 (6)0.0163 (7)0.0240 (6)
C150.0532 (13)0.0436 (11)0.0576 (14)0.0213 (10)0.0292 (11)0.0226 (10)
Ni1—N31.9220 (15)N2—N31.407 (2)
Ni1—N3i1.9220 (15)N3—C81.298 (2)
Ni1—S1i2.1753 (5)C8—C91.462 (2)
Ni1—S12.1753 (5)C8—H80.94 (2)
C1—C61.376 (3)C9—C101.398 (3)
C1—C21.380 (3)C9—C141.402 (3)
C1—N11.409 (2)C10—C111.383 (3)
C2—C31.392 (3)C10—H100.9500
C2—H20.9500C11—C121.375 (3)
C3—C41.370 (4)C11—H110.9500
C3—H30.9500C12—O11.375 (2)
C4—C51.380 (5)C12—C131.398 (3)
C4—H40.9500C13—O21.367 (2)
C5—C61.381 (4)C13—C141.381 (2)
C5—H50.9500C14—H140.9500
C6—H60.9500O1—H1O10.8400
N1—C71.361 (2)O2—C151.423 (2)
N1—H1N10.81 (3)C15—H15A0.9800
C7—N21.306 (2)C15—H15B0.9800
C7—S11.7322 (18)C15—H15C0.9800
N3—Ni1—N3i180.00 (6)C8—N3—N2115.09 (15)
N3—Ni1—S1i95.42 (5)C8—N3—Ni1123.66 (13)
N3i—Ni1—S1i84.58 (5)N2—N3—Ni1121.20 (11)
N3—Ni1—S184.58 (5)N3—C8—C9131.97 (17)
N3i—Ni1—S195.42 (5)N3—C8—H8116.2 (13)
S1i—Ni1—S1180.00 (3)C9—C8—H8111.8 (13)
C6—C1—C2119.5 (2)C10—C9—C14119.10 (16)
C6—C1—N1116.8 (2)C10—C9—C8114.36 (17)
C2—C1—N1123.65 (18)C14—C9—C8126.46 (16)
C1—C2—C3119.7 (2)C11—C10—C9120.99 (18)
C1—C2—H2120.1C11—C10—H10119.5
C3—C2—H2120.1C9—C10—H10119.5
C4—C3—C2120.9 (2)C12—C11—C10119.49 (17)
C4—C3—H3119.6C12—C11—H11120.3
C2—C3—H3119.6C10—C11—H11120.3
C3—C4—C5118.9 (2)C11—C12—O1119.75 (16)
C3—C4—H4120.5C11—C12—C13120.43 (16)
C5—C4—H4120.5O1—C12—C13119.81 (17)
C4—C5—C6120.7 (3)O2—C13—C14125.69 (16)
C4—C5—H5119.6O2—C13—C12113.95 (15)
C6—C5—H5119.6C14—C13—C12120.35 (17)
C1—C6—C5120.3 (3)C13—C14—C9119.58 (16)
C1—C6—H6119.8C13—C14—H14120.2
C5—C6—H6119.8C9—C14—H14120.2
C7—N1—C1130.38 (17)C12—O1—H1O1109.5
C7—N1—H1N1111.6 (19)C13—O2—C15117.54 (14)
C1—N1—H1N1117.9 (19)O2—C15—H15A109.5
N2—C7—N1121.37 (16)O2—C15—H15B109.5
N2—C7—S1123.56 (14)H15A—C15—H15B109.5
N1—C7—S1115.05 (13)O2—C15—H15C109.5
C7—S1—Ni196.21 (6)H15A—C15—H15C109.5
C7—N2—N3110.66 (14)H15B—C15—H15C109.5
D—H···AD—HH···AD···AD—H···A
N1—H1N1···O1ii0.81 (3)2.37 (3)3.122 (2)154 (2)
O1—H1O1···N2iii0.842.543.131 (2)129
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N1—H1N1⋯O1i 0.81 (3)2.37 (3)3.122 (2)154 (2)
O1—H1O1⋯N2ii 0.842.543.131 (2)129

Symmetry codes: (i) ; (ii) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Bis(4-hydroxy-3-methoxybenzaldehyde thiosemicarbazonato-N1,S)nickel(II) tetraethanol solvate.

Authors:  N T Akinchan; U Abram
Journal:  Acta Crystallogr C       Date:  2000-05-15       Impact factor: 1.172

3.  4-Hy-droxy-3-meth-oxy-benzaldehyde thio-semicarbazone.

Authors:  Adriano Bof de Oliveira; Bárbara Regina Santos Feitosa; Christian Näther; Inke Jess
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-11-30
  3 in total

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