Literature DB >> 24860291

A triclinic polymorph of (-)-(S)-N-benzyl-2-[(R)-6-fluoro-chroman-2-yl]-2-hy-droxy-ethanaminium bromide.

Yoann Rousselin1, Hugo Laureano2, Alexandre Clavel2.   

Abstract

The title salt, C18H21FNO2 (+)·Br(-), determined at 115 K, crystallizes in the triclinic space group P1. The previously reported polymorph occurs in the monoclinic space group P21 and has two independent mol-ecules in the asymmetric unit [Peeters et al. (1993 ▶). Acta Cryst. C49, 2157-2160]. In the title molecule, the pyran rings adopt half-chair conformations. The absolute configuration is S for the hy-droxy-bearing C atom and R for the asymmetric C atom in the di-hydro-pyran unit. In the crystal, the components are linked by N-H⋯Br and O-H⋯Br hydrogen bonds, forming chains along the c-axis direction. The crystal studied was refined as an inversion twin.

Entities:  

Year:  2013        PMID: 24860291      PMCID: PMC4004435          DOI: 10.1107/S1600536813030377

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis of the enanti­opure title product, see: Jas et al. (2011 ▶). For studies of related isomers, see: Cini et al. (1990 ▶); Tuchalski et al. (2006 ▶, 2008 ▶); Rousselin et al. (2012 ▶). for the monoclinic polymorph, see: Peeters et al. (1993 ▶). The title compound is a key inter­mediate in the synthesis of the beta blocker dl-nebivolol [systematic name: 1-(6-fluoro­chroman-2-yl)-{[2-(6-fluoro­chroman-2-yl)-2-hy­droxy-eth­yl]amino}­ethanol. For the pharmacological properties of nebivolol, see: Van Lommen et al. (1990 ▶). For puckering parameters, see: Cremer & Pople (1975 ▶). For background to polymorphism, see: Bernstein (2002 ▶).

Experimental

Crystal data

C18H21FNO2Br M = 382.27 Triclinic, a = 4.9248 (2) Å b = 5.5117 (2) Å c = 16.3894 (7) Å α = 83.721 (2)° β = 89.038 (2)° γ = 86.765 (2)° V = 441.48 (3) Å3 Z = 1 Mo Kα1 radiation μ = 2.35 mm−1 T = 115 K 0.25 × 0.2 × 0.2 mm

Data collection

Nonius KappaCCD diffractometer with APEXII detector Absorption correction: multi-scan (SADABS; Bruker, 2012 ▶) T min = 0.61, T max = 0.74 10328 measured reflections 3903 independent reflections 3886 reflections with I > 2σ(I) R int = 0.020

Refinement

R[F 2 > 2σ(F 2)] = 0.021 wR(F 2) = 0.052 S = 1.11 3903 reflections 210 parameters 3 restraints H-atom parameters constrained Δρmax = 0.37 e Å−3 Δρmin = −0.18 e Å−3 Absolute structure: Flack (1983 ▶); refined as an inversion twin Absolute structure parameter: 0.013 (7) Data collection: APEX2 (Bruker, 2012 ▶); cell refinement: SAINT (Bruker, 2012 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: OLEX2 (Dolomanov et al., 2009 ▶); software used to prepare material for publication: OLEX2. Crystal structure: contains datablock(s) I. DOI: 10.1107/S1600536813030377/gw2140sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813030377/gw2140Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813030377/gw2140Isup3.cdx Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813030377/gw2140Isup4.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C18H21FNO2+·BrV = 441.48 (3) Å3
Mr = 382.27Z = 1
Triclinic, P1F(000) = 196
a = 4.9248 (2) ÅDx = 1.438 Mg m3
b = 5.5117 (2) ÅMo Kα1 radiation, λ = 0.71073 Å
c = 16.3894 (7) ŵ = 2.35 mm1
α = 83.721 (2)°T = 115 K
β = 89.038 (2)°Prism, clear light colourless
γ = 86.765 (2)°0.25 × 0.2 × 0.2 mm
Nonius KappaCCD diffractometer with APEXII detector3903 independent reflections
Radiation source: X-ray tube, Siemens KFF Mo 2K-1803886 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.020
Detector resolution: 9 pixels mm-1θmax = 27.6°, θmin = 3.7°
CCD rotation images, thick slices scansh = −6→6
Absorption correction: multi-scan (SADABS; Bruker, 2012)k = −7→6
Tmin = 0.61, Tmax = 0.74l = −21→21
10328 measured reflections
Refinement on F2Hydrogen site location: inferred from neighbouring sites
Least-squares matrix: fullH-atom parameters constrained
R[F2 > 2σ(F2)] = 0.021w = 1/[σ2(Fo2) + (0.0317P)2 + 0.0488P] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.052(Δ/σ)max < 0.001
S = 1.11Δρmax = 0.37 e Å3
3903 reflectionsΔρmin = −0.18 e Å3
210 parametersAbsolute structure: Flack (1983); refined as an inversion twin
3 restraintsAbsolute structure parameter: 0.013 (7)
0 constraints
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refined as a 2-component inversion twin.
xyzUiso*/Ueq
C1−0.0450 (9)0.1145 (8)0.4454 (2)0.0432 (10)
C20.1300 (8)0.3000 (9)0.4294 (2)0.0438 (11)
H20.19740.38100.47250.053*
C30.2056 (7)0.3656 (7)0.3481 (2)0.0336 (7)
H30.32600.49320.33480.040*
C40.1030 (6)0.2425 (5)0.28630 (16)0.0208 (5)
C5−0.0712 (6)0.0542 (6)0.30396 (17)0.0229 (6)
C6−0.1462 (7)−0.0085 (7)0.3862 (2)0.0350 (8)
H6−0.2666−0.13560.40030.042*
C7−0.1764 (6)−0.0806 (7)0.2368 (2)0.0220 (6)
H7A−0.3673−0.02410.22460.026*
H7B−0.1721−0.25800.25510.026*
C8−0.0012 (6)−0.0345 (6)0.15966 (19)0.0155 (6)
H8A0.1775−0.12480.16760.019*
H8B−0.0911−0.09320.11250.019*
C90.0379 (5)0.2363 (5)0.14248 (15)0.0135 (5)
H9−0.14480.32540.13900.016*
C100.2004 (5)0.3138 (5)0.06472 (15)0.0142 (5)
H100.23120.49170.06420.017*
C110.0363 (5)0.2836 (6)−0.01119 (18)0.0122 (6)
H11A−0.01660.1125−0.00920.015*
H11B−0.13180.3911−0.01200.015*
C120.0371 (6)0.3492 (6)−0.1649 (2)0.0174 (7)
H12A−0.03000.1845−0.16810.021*
H12B−0.12250.4662−0.16330.021*
C130.2086 (6)0.4206 (5)−0.23948 (16)0.0186 (5)
C140.4109 (6)0.2578 (6)−0.26486 (18)0.0263 (6)
H140.43970.1012−0.23490.032*
C150.5715 (8)0.3220 (8)−0.3336 (2)0.0394 (8)
H150.71170.2107−0.34940.047*
C160.5283 (9)0.5446 (9)−0.3784 (2)0.0438 (10)
H160.63580.5868−0.42600.053*
C170.3274 (12)0.7082 (9)−0.3541 (2)0.0481 (13)
H170.29890.8634−0.38510.058*
C180.1655 (10)0.6482 (8)−0.2847 (2)0.0332 (10)
H180.02770.7615−0.26850.040*
N10.2011 (4)0.3481 (4)−0.08768 (13)0.0128 (4)
H1A0.35840.2287−0.08930.015*
H1B0.27250.5118−0.08590.015*
O10.1885 (4)0.3208 (4)0.20789 (11)0.0191 (4)
O20.4597 (3)0.1871 (4)0.06423 (12)0.0191 (4)
H2A0.44770.05740.04230.029*
F1−0.1223 (7)0.0501 (6)0.52531 (13)0.0673 (9)
Br10.56053 (2)0.82061 (2)0.92529 (2)0.02213 (8)
U11U22U33U12U13U23
C10.055 (2)0.058 (3)0.0135 (14)0.0171 (19)0.0071 (14)−0.0006 (14)
C20.058 (3)0.055 (3)0.0186 (15)0.016 (2)−0.0064 (19)−0.0170 (16)
C30.0379 (18)0.042 (2)0.0223 (15)0.0058 (15)−0.0052 (13)−0.0137 (14)
C40.0202 (13)0.0257 (14)0.0158 (12)0.0085 (10)−0.0025 (10)−0.0045 (10)
C50.0190 (13)0.0303 (15)0.0173 (13)0.0093 (11)0.0031 (10)0.0012 (11)
C60.0363 (18)0.043 (2)0.0228 (15)0.0080 (15)0.0072 (13)0.0047 (14)
C70.0181 (13)0.0259 (16)0.0207 (16)−0.0041 (11)0.0036 (12)0.0049 (13)
C80.0139 (13)0.0169 (15)0.0157 (14)−0.0014 (10)−0.0005 (11)−0.0009 (12)
C90.0117 (11)0.0151 (12)0.0142 (11)0.0001 (9)−0.0005 (9)−0.0038 (9)
C100.0106 (11)0.0166 (12)0.0161 (12)−0.0021 (9)0.0005 (9)−0.0042 (9)
C110.0065 (11)0.0168 (13)0.0135 (14)−0.0025 (9)0.0012 (10)−0.0017 (11)
C120.0136 (13)0.0244 (15)0.0152 (14)−0.0036 (11)−0.0040 (11)−0.0055 (12)
C130.0214 (13)0.0216 (14)0.0140 (12)−0.0088 (10)−0.0044 (10)−0.0022 (10)
C140.0285 (15)0.0325 (16)0.0190 (13)−0.0058 (12)0.0027 (11)−0.0060 (12)
C150.0361 (18)0.063 (3)0.0220 (15)−0.0132 (17)0.0078 (13)−0.0121 (16)
C160.050 (2)0.067 (3)0.0170 (14)−0.034 (2)0.0022 (14)−0.0008 (16)
C170.082 (3)0.037 (2)0.025 (2)−0.030 (2)−0.016 (2)0.0138 (18)
C180.047 (2)0.027 (2)0.0249 (19)−0.0061 (16)−0.0111 (16)0.0009 (15)
N10.0104 (10)0.0143 (10)0.0140 (10)−0.0030 (8)0.0001 (8)−0.0017 (8)
O10.0196 (9)0.0250 (10)0.0139 (8)−0.0045 (7)−0.0015 (7)−0.0060 (7)
O20.0065 (8)0.0321 (11)0.0197 (9)0.0000 (7)−0.0006 (7)−0.0073 (8)
F10.101 (2)0.082 (2)0.0154 (10)0.0127 (17)0.0165 (12)−0.0005 (11)
Br10.01948 (11)0.01430 (11)0.03333 (14)−0.00276 (7)−0.00045 (8)−0.00482 (8)
C1—C21.375 (7)C10—O21.421 (3)
C1—C61.360 (6)C11—H11A0.9900
C1—F11.372 (4)C11—H11B0.9900
C2—H20.9500C11—N11.502 (3)
C2—C31.392 (6)C12—H12A0.9900
C3—H30.9500C12—H12B0.9900
C3—C41.396 (4)C12—C131.503 (4)
C4—C51.387 (5)C12—N11.513 (4)
C4—O11.377 (3)C13—C141.392 (4)
C5—C61.403 (4)C13—C181.393 (5)
C5—C71.508 (5)C14—H140.9500
C6—H60.9500C14—C151.390 (4)
C7—H7A0.9900C15—H150.9500
C7—H7B0.9900C15—C161.367 (6)
C7—C81.525 (4)C16—H160.9500
C8—H8A0.9900C16—C171.384 (7)
C8—H8B0.9900C17—H170.9500
C8—C91.511 (4)C17—C181.399 (7)
C9—H91.0000C18—H180.9500
C9—C101.527 (3)N1—H1A0.9900
C9—O11.446 (3)N1—H1B0.9900
C10—H101.0000O2—H2A0.8400
C10—C111.524 (4)
C6—C1—C2123.4 (3)O2—C10—H10107.5
C6—C1—F1118.2 (4)O2—C10—C11112.2 (2)
F1—C1—C2118.4 (4)C10—C11—H11A109.6
C1—C2—H2121.0C10—C11—H11B109.6
C1—C2—C3118.1 (4)H11A—C11—H11B108.1
C3—C2—H2121.0N1—C11—C10110.3 (2)
C2—C3—H3120.3N1—C11—H11A109.6
C2—C3—C4119.4 (4)N1—C11—H11B109.6
C4—C3—H3120.3H12A—C12—H12B108.1
C5—C4—C3121.5 (3)C13—C12—H12A109.6
O1—C4—C3115.2 (3)C13—C12—H12B109.6
O1—C4—C5123.2 (3)C13—C12—N1110.4 (2)
C4—C5—C6118.2 (3)N1—C12—H12A109.6
C4—C5—C7121.0 (2)N1—C12—H12B109.6
C6—C5—C7120.8 (3)C14—C13—C12120.2 (3)
C1—C6—C5119.4 (4)C14—C13—C18119.1 (3)
C1—C6—H6120.3C18—C13—C12120.7 (3)
C5—C6—H6120.3C13—C14—H14119.6
C5—C7—H7A109.7C15—C14—C13120.7 (3)
C5—C7—H7B109.7C15—C14—H14119.6
C5—C7—C8109.8 (3)C14—C15—H15119.9
H7A—C7—H7B108.2C16—C15—C14120.3 (4)
C8—C7—H7A109.7C16—C15—H15119.9
C8—C7—H7B109.7C15—C16—H16120.2
C7—C8—H8A109.9C15—C16—C17119.7 (3)
C7—C8—H8B109.9C17—C16—H16120.2
H8A—C8—H8B108.3C16—C17—H17119.5
C9—C8—C7109.1 (3)C16—C17—C18120.9 (4)
C9—C8—H8A109.9C18—C17—H17119.5
C9—C8—H8B109.9C13—C18—C17119.3 (4)
C8—C9—H9108.7C13—C18—H18120.4
C8—C9—C10115.5 (2)C17—C18—H18120.4
C10—C9—H9108.7C11—N1—C12112.5 (2)
O1—C9—C8110.5 (2)C11—N1—H1A109.1
O1—C9—H9108.7C11—N1—H1B109.1
O1—C9—C10104.45 (19)C12—N1—H1A109.1
C9—C10—H10107.5C12—N1—H1B109.1
C11—C10—C9110.3 (2)H1A—N1—H1B107.8
C11—C10—H10107.5C4—O1—C9115.5 (2)
O2—C10—C9111.7 (2)C10—O2—H2A109.5
C1—C2—C3—C4−0.1 (5)C10—C9—O1—C4−171.2 (2)
C2—C1—C6—C5−0.1 (6)C10—C11—N1—C12−173.5 (2)
C2—C3—C4—C5−0.6 (5)C12—C13—C14—C15−179.8 (3)
C2—C3—C4—O1179.8 (3)C12—C13—C18—C17−179.5 (4)
C3—C4—C5—C60.9 (4)C13—C12—N1—C11178.6 (2)
C3—C4—C5—C7−178.8 (3)C13—C14—C15—C16−1.5 (5)
C3—C4—O1—C9−166.3 (2)C14—C13—C18—C17−0.4 (5)
C4—C5—C6—C1−0.6 (5)C14—C15—C16—C171.3 (6)
C4—C5—C7—C817.2 (4)C15—C16—C17—C18−0.6 (6)
C5—C4—O1—C914.1 (4)C16—C17—C18—C130.1 (7)
C5—C7—C8—C9−47.7 (3)C18—C13—C14—C151.0 (5)
C6—C1—C2—C30.4 (6)N1—C12—C13—C1472.8 (3)
C6—C5—C7—C8−162.5 (3)N1—C12—C13—C18−108.0 (3)
C7—C5—C6—C1179.1 (3)O1—C4—C5—C6−179.5 (3)
C7—C8—C9—C10−177.6 (2)O1—C4—C5—C70.8 (4)
C7—C8—C9—O164.1 (3)O1—C9—C10—C11−168.4 (2)
C8—C9—C10—C1170.0 (3)O1—C9—C10—O266.1 (2)
C8—C9—C10—O2−55.4 (3)O2—C10—C11—N1−52.0 (3)
C8—C9—O1—C4−46.4 (3)F1—C1—C2—C3−179.5 (3)
C9—C10—C11—N1−177.2 (2)F1—C1—C6—C5179.8 (3)
D—H···AD—HH···AD···AD—H···A
N1—H1A···Br1i0.992.403.306 (2)152
N1—H1B···Br1ii0.992.303.258 (2)162
O2—H2A···Br1i0.842.473.2198 (19)149
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N1—H1A⋯Br1i 0.992.403.306 (2)152
N1—H1B⋯Br1ii 0.992.303.258 (2)162
O2—H2A⋯Br1i 0.842.473.2198 (19)149

Symmetry codes: (i) ; (ii) .

  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Synthesis and pharmacological properties of nebivolol, a new antihypertensive compound.

Authors:  G Van Lommen; M De Bruyn; M Schroven
Journal:  J Pharm Belg       Date:  1990 Nov-Dec

3.  l-Nebiviololinium chloride dihydrate.

Authors:  Gisbert Tuchalski; Andre Hänsicke; Günther Reck; Franziska Emmerling
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2007-12-06

4.  (S,S,S,S)-Nebivolol hydro-chloride hemihydrate.

Authors:  Yoann Rousselin; Amelie Bruel; Alexandre Clavel
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-11-14
  4 in total

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