Literature DB >> 24860244

Peak-specific phase correction for automated spectrum processing of in vivo magnetic resonance spectroscopic imaging by using the multiscale approach.

Xiaodong Zhang1, Xiaoping Hu2.   

Abstract

Automatic metabolite quantification with curve fitting is essential in analyzing large amount of in vivo magnetic resonance spectroscopic imaging (MRSI) data. However, such data analysis is usually hindered by distorted metabolite peaks and baselines normally seen in in vivo MRS. In the present study, a multiscale approach was utilized for peak-specific automatic phase correction in multi-slice MRSI data of human brain. The results suggest that this novel approach can improve the robustness and efficiency of metabolite quantification and facilitate automatic analysis of multi-slice in vivo MRSI data in human brain.

Entities:  

Keywords:  MRSI; automatic phase correction; chemical shift imaging (CSI); in vivo MR spectroscopy; multiscale analysis; spectral curve fitting

Year:  2014        PMID: 24860244      PMCID: PMC4032223     

Source DB:  PubMed          Journal:  Bo Pu Xue Za Zhi        ISSN: 1000-4556


  21 in total

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Authors:  G Metzger; S Sarkar; X Zhang; K Heberlein; M Patel; X Hu
Journal:  Magn Reson Imaging       Date:  1999-04       Impact factor: 2.546

2.  Improved quantification of in vivo 1H NMR spectra by optimization of signal acquisition and processing and by incorporation of prior knowledge into the spectral fitting.

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Journal:  Magn Reson Med       Date:  1990-08       Impact factor: 4.668

3.  Quantitative assessment of improved homogeneity using higher-order shims for spectroscopic imaging of the brain.

Authors:  D M Spielman; E Adalsteinsson; K O Lim
Journal:  Magn Reson Med       Date:  1998-09       Impact factor: 4.668

Review 4.  High spatial resolution and speed in MRSI.

Authors:  S J Nelson; D B Vigneron; J Star-Lack; J Kurhanewicz
Journal:  NMR Biomed       Date:  1997-12       Impact factor: 4.044

5.  Automated annotation and quantification of metabolites in 1H NMR data of biological origin.

Authors:  Erik Alm; Tove Slagbrand; K Magnus Aberg; Erik Wahlström; Ingela Gustafsson; Johan Lindberg
Journal:  Anal Bioanal Chem       Date:  2012-02-24       Impact factor: 4.142

6.  Center-out echo-planar spectroscopic imaging with correction of gradient-echo phase and time shifts.

Authors:  Christian Labadie; Stefan Hetzer; Jessica Schulz; Toralf Mildner; Monique Aubert-Frécon; Harald E Möller
Journal:  Magn Reson Med       Date:  2012-07-27       Impact factor: 4.668

Review 7.  Magnetic resonance spectroscopy in clinical oncology.

Authors:  W Golder
Journal:  Onkologie       Date:  2004-06

8.  Absolute metabolite quantification by in vivo NMR spectroscopy: I. Introduction, objectives and activities of a concerted action in biomedical research.

Authors:  F Podo; O Henriksen; W M Bovée; M O Leach; D Leibfritz; J D de Certaines
Journal:  Magn Reson Imaging       Date:  1998-11       Impact factor: 2.546

9.  IQMNMR: Open source software using time-domain NMR data for automated identification and quantification of metabolites in batches.

Authors:  Xu Song; Bo-Li Zhang; Hong-Min Liu; Bo-Yang Yu; Xiu-Mei Gao; Li-Yuan Kang
Journal:  BMC Bioinformatics       Date:  2011-08-12       Impact factor: 3.307

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  1 in total

1.  Arterial spin labeling perfusion magnetic resonance imaging of non-human primates.

Authors:  Xiaodong Zhang; Chun-Xia Li
Journal:  Quant Imaging Med Surg       Date:  2016-10
  1 in total

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