Literature DB >> 24844178

Synthetic riboswitches - A tool comes of age.

Florian Groher1, Beatrix Suess2.   

Abstract

Within the last decade, it has become obvious that RNA plays an important role in regulating gene expression. This has led to a plethora of approaches aiming at exploiting the outstanding chemical properties of RNA to develop synthetic RNA regulators for conditional gene expression systems. Consequently, many different regulators have been developed to act on various stages of gene expression. They can be engineered to respond to almost any ligand of choice and are, therefore, of great interest for applications in synthetic biology. This review presents an overview of such engineered riboswitches, discusses their applicability and points out recent trends in their development. This article is part of a Special Issue entitled: Riboswitches.
Copyright © 2014 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Aptamer; Engineered riboswitch; Ribozyme; Synthetic biology; Tetracycline; Theophylline

Year:  2014        PMID: 24844178     DOI: 10.1016/j.bbagrm.2014.05.005

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  25 in total

Review 1.  Target activation by regulatory RNAs in bacteria.

Authors:  Kai Papenfort; Carin K Vanderpool
Journal:  FEMS Microbiol Rev       Date:  2015-04-30       Impact factor: 16.408

Review 2.  Optimization of industrial microorganisms: recent advances in synthetic dynamic regulators.

Authors:  Byung Eun Min; Hyun Gyu Hwang; Hyun Gyu Lim; Gyoo Yeol Jung
Journal:  J Ind Microbiol Biotechnol       Date:  2016-11-10       Impact factor: 3.346

Review 3.  Biosensors and their applications - A review.

Authors:  Parikha Mehrotra
Journal:  J Oral Biol Craniofac Res       Date:  2016-01-06

4.  Riboswitch-mediated Attenuation of Transgene Cytotoxicity Increases Adeno-associated Virus Vector Yields in HEK-293 Cells.

Authors:  Benjamin Strobel; Benedikt Klauser; Jörg S Hartig; Thorsten Lamla; Florian Gantner; Sebastian Kreuz
Journal:  Mol Ther       Date:  2015-07-03       Impact factor: 11.454

5.  Next-level riboswitch development-implementation of Capture-SELEX facilitates identification of a new synthetic riboswitch.

Authors:  Adrien Boussebayle; Daniel Torka; Sandra Ollivaud; Johannes Braun; Cristina Bofill-Bosch; Max Dombrowski; Florian Groher; Kay Hamacher; Beatrix Suess
Journal:  Nucleic Acids Res       Date:  2019-05-21       Impact factor: 16.971

6.  Streamlined CRISPR genome engineering in wild-type bacteria using SIBR-Cas.

Authors:  Constantinos Patinios; Sjoerd C A Creutzburg; Adini Q Arifah; Belén Adiego-Pérez; Evans A Gyimah; Colin J Ingham; Servé W M Kengen; John van der Oost; Raymond H J Staals
Journal:  Nucleic Acids Res       Date:  2021-11-08       Impact factor: 16.971

7.  Selection of High-Affinity RNA Aptamers That Distinguish between Doxycycline and Tetracycline.

Authors:  Zachary J Tickner; Guocai Zhong; Kelly R Sheptack; Michael Farzan
Journal:  Biochemistry       Date:  2020-09-06       Impact factor: 3.162

8.  Small synthetic molecule-stabilized RNA pseudoknot as an activator for -1 ribosomal frameshifting.

Authors:  Saki Matsumoto; Neva Caliskan; Marina V Rodnina; Asako Murata; Kazuhiko Nakatani
Journal:  Nucleic Acids Res       Date:  2018-09-19       Impact factor: 16.971

9.  Engineering and characterization of fluorogenic glycine riboswitches.

Authors:  Simon Ketterer; Lukas Gladis; Adnan Kozica; Matthias Meier
Journal:  Nucleic Acids Res       Date:  2016-05-24       Impact factor: 16.971

Review 10.  Exploitation of Bacillus subtilis as a robust workhorse for production of heterologous proteins and beyond.

Authors:  Wenjing Cui; Laichuang Han; Feiya Suo; Zhongmei Liu; Li Zhou; Zhemin Zhou
Journal:  World J Microbiol Biotechnol       Date:  2018-09-10       Impact factor: 3.312

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