Literature DB >> 24833129

Conformational change in transfer RNA is an early indicator of acute cellular damage.

Eikan Mishima1, Chisako Inoue2, Daisuke Saigusa3, Ryusuke Inoue4, Koki Ito5, Yusuke Suzuki5, Daisuke Jinno3, Yuri Tsukui3, Yosuke Akamatsu6, Masatake Araki7, Kimi Araki7, Ritsuko Shimizu8, Haruka Shinke9, Takehiro Suzuki1, Yoichi Takeuchi1, Hisato Shima1, Yasutoshi Akiyama1, Takafumi Toyohara1, Chitose Suzuki1, Yoshikatu Saiki5, Teiji Tominaga6, Shigehito Miyagi10, Naoki Kawagisihi10, Tomoyoshi Soga11, Takayoshi Ohkubo12, Kenichi Yamamura7, Yutaka Imai13, Satohiro Masuda9, Venkata Sabbisetti14, Takaharu Ichimura14, David B Mount14, Joseph V Bonventre14, Sadayoshi Ito1, Yoshihisa Tomioka3, Kunihiko Itoh2, Takaaki Abe15.   

Abstract

Tissue damage by oxidative stress is a key pathogenic mechanism in various diseases, including AKI and CKD. Thus, early detection of oxidative tissue damage is important. Using a tRNA-specific modified nucleoside 1-methyladenosine (m1A) antibody, we show that oxidative stress induces a direct conformational change in tRNA structure that promotes subsequent tRNA fragmentation and occurs much earlier than DNA damage. In various models of tissue damage (ischemic reperfusion, toxic injury, and irradiation), the levels of circulating tRNA derivatives increased rapidly. In humans, the levels of circulating tRNA derivatives also increased under conditions of acute renal ischemia, even before levels of other known tissue damage markers increased. Notably, the level of circulating free m1A correlated with mortality in the general population (n=1033) over a mean follow-up of 6.7 years. Compared with healthy controls, patients with CKD had higher levels of circulating free m1A, which were reduced by treatment with pitavastatin (2 mg/d; n=29). Therefore, tRNA damage reflects early oxidative stress damage, and detection of tRNA damage may be a useful tool for identifying organ damage and forming a clinical prognosis.
Copyright © 2014 by the American Society of Nephrology.

Entities:  

Mesh:

Substances:

Year:  2014        PMID: 24833129      PMCID: PMC4178440          DOI: 10.1681/ASN.2013091001

Source DB:  PubMed          Journal:  J Am Soc Nephrol        ISSN: 1046-6673            Impact factor:   10.121


  50 in total

1.  Excretion pattern investigation of urinary normal and modified nucleosides of breast cancer patients by RP-HPLC and factor analysis method.

Authors:  G Xu; H R Schmid; X Lu; H M Liebich; P Lu
Journal:  Biomed Chromatogr       Date:  2000-11       Impact factor: 1.902

2.  Use of terbium as a probe of tRNA tertiary structure and folding.

Authors:  M R Hargittai; K Musier-Forsyth
Journal:  RNA       Date:  2000-11       Impact factor: 4.942

3.  Tubular leakage and obstruction after renal ischemia: structural-functional correlations.

Authors:  J F Donohoe; M A Venkatachalam; D B Bernard; N G Levinsky
Journal:  Kidney Int       Date:  1978-03       Impact factor: 10.612

4.  Artificial neural network classification based on high-performance liquid chromatography of urinary and serum nucleosides for the clinical diagnosis of cancer.

Authors:  Jun Yang; Guowang Xu; Hongwei Kong; Yufang Zheng; Tao Pang; Qing Yang
Journal:  J Chromatogr B Analyt Technol Biomed Life Sci       Date:  2002-11-15       Impact factor: 3.205

5.  Oxidative damage is the earliest event in Alzheimer disease.

Authors:  A Nunomura; G Perry; G Aliev; K Hirai; A Takeda; E K Balraj; P K Jones; H Ghanbari; T Wataya; S Shimohama; S Chiba; C S Atwood; R B Petersen; M A Smith
Journal:  J Neuropathol Exp Neurol       Date:  2001-08       Impact factor: 3.685

6.  Mg2+-induced tRNA folding.

Authors:  V Serebrov; R J Clarke; H J Gross; L Kisselev
Journal:  Biochemistry       Date:  2001-06-05       Impact factor: 3.162

Review 7.  Apoptosis versus oncotic necrosis in hepatic ischemia/reperfusion injury.

Authors:  Hartmut Jaeschke; John J Lemasters
Journal:  Gastroenterology       Date:  2003-10       Impact factor: 22.682

8.  Increased prevalence of oxidant stress and inflammation in patients with moderate to severe chronic kidney disease.

Authors:  B Payson Oberg; Elizabeth McMenamin; F Lee Lucas; Ellen McMonagle; Jason Morrow; T Alp Ikizler; Jonathan Himmelfarb
Journal:  Kidney Int       Date:  2004-03       Impact factor: 10.612

9.  Ischemic preconditioning protects the steatotic mouse liver against reperfusion injury: an ATP dependent mechanism.

Authors:  Nazia Selzner; Markus Selzner; Wolfram Jochum; Pierre-Alain Clavien
Journal:  J Hepatol       Date:  2003-07       Impact factor: 25.083

10.  Preparation of a monoclonal antibody specific for 1-methyladenosine and its application for the detection of elevated levels of 1-methyladenosine in urines from cancer patients.

Authors:  K Itoh; M Mizugaki; N Ishida
Journal:  Jpn J Cancer Res       Date:  1988-10
View more
  49 in total

1.  Drugs Repurposed as Antiferroptosis Agents Suppress Organ Damage, Including AKI, by Functioning as Lipid Peroxyl Radical Scavengers.

Authors:  Eikan Mishima; Emiko Sato; Junya Ito; Ken-Ichi Yamada; Chitose Suzuki; Yoshitsugu Oikawa; Tetsuro Matsuhashi; Koichi Kikuchi; Takafumi Toyohara; Takehiro Suzuki; Sadayoshi Ito; Kiyotaka Nakagawa; Takaaki Abe
Journal:  J Am Soc Nephrol       Date:  2019-11-25       Impact factor: 10.121

2.  The stress specific impact of ALKBH1 on tRNA cleavage and tiRNA generation.

Authors:  Sherif Rashad; Xiaobo Han; Kanako Sato; Eikan Mishima; Takaaki Abe; Teiji Tominaga; Kuniyasu Niizuma
Journal:  RNA Biol       Date:  2020-06-21       Impact factor: 4.652

3.  Epigenetics: A new methyl mark on messengers.

Authors:  Anna M Kietrys; Eric T Kool
Journal:  Nature       Date:  2016-02-25       Impact factor: 49.962

4.  Deep sequencing of small non-coding RNA highlights brain-specific expression patterns and RNA cleavage.

Authors:  Fiete Haack; Nares Trakooljul; Kevin Gley; Eduard Murani; Frieder Hadlich; Klaus Wimmers; Siriluck Ponsuksili
Journal:  RNA Biol       Date:  2019-08-29       Impact factor: 4.652

Review 5.  Role of host tRNAs and aminoacyl-tRNA synthetases in retroviral replication.

Authors:  Danni Jin; Karin Musier-Forsyth
Journal:  J Biol Chem       Date:  2019-01-30       Impact factor: 5.157

6.  Translation regulation in skin cancer from a tRNA point of view.

Authors:  Katerina Grafanaki; Dimitrios Anastasakis; George Kyriakopoulos; Ilias Skeparnias; Sophia Georgiou; Constantinos Stathopoulos
Journal:  Epigenomics       Date:  2018-12-19       Impact factor: 4.778

Review 7.  Transfer RNA-derived fragments and tRNA halves: biogenesis, biological functions and their roles in diseases.

Authors:  Yijing Shen; Xiuchong Yu; Linwen Zhu; Tianwen Li; Zhilong Yan; Junming Guo
Journal:  J Mol Med (Berl)       Date:  2018-09-19       Impact factor: 4.599

Review 8.  tRNA fragmentation and protein translation dynamics in the course of kidney injury.

Authors:  Iadh Mami; Nicolas Pallet
Journal:  RNA Biol       Date:  2018-02-12       Impact factor: 4.652

9.  t-RNA fragmentation as an early biomarker of (kidney) injury.

Authors:  Alexander Holderied; Hans-Joachim Anders
Journal:  J Am Soc Nephrol       Date:  2014-05-15       Impact factor: 10.121

10.  Acquired Expression of Mutant Mitofusin 2 Causes Progressive Neurodegeneration and Abnormal Behavior.

Authors:  Kaori Ishikawa; Satoshi Yamamoto; Satoko Hattori; Naoya Nishimura; Haruna Tani; Takayuki Mito; Hirokazu Matsumoto; Tsuyoshi Miyakawa; Kazuto Nakada
Journal:  J Neurosci       Date:  2019-01-03       Impact factor: 6.167

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.