| Literature DB >> 24831519 |
Marzia Dolcino1, Giuseppe Patuzzo2, Alessandro Barbieri2, Elisa Tinazzi2, Monica Rizzi2, Ruggero Beri2, Giuseppe Argentino2, Andrea Ottria3, Claudio Lunardi2, Antonio Puccetti4.
Abstract
BACKGROUND: Regular intravenous immunoglobulin treatment is used to replace antibody deficiency in primary immunodeficiency diseases; however the therapeutic effect seems to be related not only to antibody replacement but also to an active role in the modulation of the immune response. Common variable immunodeficiency is the most frequent primary immunodeficiency seen in clinical practice.Entities:
Mesh:
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Year: 2014 PMID: 24831519 PMCID: PMC4022614 DOI: 10.1371/journal.pone.0097571
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Genes related to adaptive immune responses in CVID patients before and after IVIg treatment.
| Gene accession | Gene description | Gene Symbol | FC | FC |
| NM_000689 | aldehyde dehydrogenase 1 family, member A1 | ALDH1A1 | 3.47 | 3.14 |
| NM_001837 | chemokine (C-C motif) receptor 3 | CCR3 | 7.40 | 5.12 |
| NM_001774 | CD37 molecule | CD37 | 2.35 | 2.31 |
| NM_001775 | CD38 molecule | CD38 | −2.37 | −2.80 |
| NM_001828 | Charcot-Leyden crystal protein | CLC | 25.77 | 20.78 |
| AF348491 | chemokine (C-X-C motif) receptor 4 | CXCR4 | 3.15 | nc |
| AF064771 | diacylglycerol kinase, alpha 80 kDa | DGKA | 3.40 | 3.24 |
| NM_004116 | FK506 binding protein 1B, 12.6 kDa | FKBP1B | −2.10 | nc |
| NM_001459 | fms-related tyrosine kinase 3 ligand | FLT3LG | 2.02 | 1.88 |
| J03189 | granzyme B | GZMB | −3.33 | −4.27 |
| U66825 | major histocompatibility complex, class II, DR beta 1 | HLA-DRB1 | 9.61 | nc |
| NM_000589 | interleukin 4 | IL4 | 2.91 | nc |
| NM_000584 | interleukin 8 | IL8 | 26.93 | 32.10 |
| NM_001557 | interleukin 8 receptor, beta | IL8RB | −2.89 | −4.20 |
| NM_002200 | interferon regulatory factor 5 | IRF5 | 3.27 | nc |
| NM_002229 | jun B proto-oncogene | JUNB | 5.26 | 5.29 |
| U50748 | leptin receptor | LEPR | −2.51 | nc |
| NM_021622 | pleckstrin homology domain containing, family A member 1 | PLEKHA1 | −2.21 | −2.43 |
| NM_006404 | protein C receptor, endothelial (EPCR) | PROCR | −2.34 | −2.34 |
| S69182 | protein tyrosine phosphatase, non-receptor type 12 | PTPN12 | −2.11 | nc |
| NM_002830 | protein tyrosine phosphatase, non-receptor type 4 | PTPN4 | −2.48 | −2.54 |
| S59049 | regulator of G-protein signaling 1 | RGS1 | 11.31 | nc |
| NM_013351 | T-box 21 | TBX21 | −2.17 | −2.51 |
| X91817 | transketolase-like 1 | TKTL1 | −4.54 | −4.90 |
| NM_001192 | tumor necrosis factor receptor superfamily, member 17 | TNFRSF17 | −13.4 | −12.8 |
| NM_003790 | tumor necrosis factor receptor superfamily, member 25 | TNFRSF25 | 2.17 | nc |
: before IVIG treatment.
: after IVIG treatment.
nc: not significantly changed.
Genes related to innate immune responses in CVID patients before and after IVIg treatment.
| Gene accession | Gene description | Gene Symbol | FC | FC |
| J04132 | CD247 molecule | CD247 | −2.23 | −2.48 |
| NM_000591 | CD14 molecule | CD14 | 2.04 | nc |
| Z25431 | NIMA (never in mitosis gene a)-related kinase 1 | NEK1 | −2.01 | nc |
| NM_014840 | NUAK family, SNF1-like kinase, 1 | NUAK1 | −3.07 | nc |
| D38122 | Fas ligand (TNF superfamily, member 6) | FASLG | −4.81 | −5.75 |
| U26455 | ataxia telangiectasia mutated | ATM | −2.21 | nc |
| NM_002048 | growth arrest-specific 1 | GAS1 | −4.93 | nc |
| NM_005433 | v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1 | YES1 | −2.60 | −2.54 |
| NM_001062 | transcobalamin I (vitamin B12 binding protein, R binder family) | TCN1 | 6.31 | 5.88 |
| J04162 | Fc fragment of IgG, low affinity IIIa, receptor (CD16a) | FCGR3A | −2.60 | −3.34 |
| NM_000139 | membrane-spanning 4-domains, subfamily A, member 2 | MS4A2 | 4.31 | 1.92 |
| NM_000878 | interleukin 2 receptor, beta | IL2RB | −2.23 | −2.67 |
| NM_000305 | paraoxonase 2 | PON2 | −2.16 | −2.21 |
| NM_004417 | dual specificity phosphatase 1 | DUSP1 | 3.54 | 3.14 |
| NM_001150 | alanyl (membrane) aminopeptidase | ANPEP | 5.62 | 5.61 |
| NM_004334 | bone marrow stromal cell antigen 1 | BST1 | 2.00 | 2.11 |
| NM_013252 | C-type lectin domain family 5, member A | CLEC5A | 2.65 | nc |
| NM_000760 | colony stimulating factor 3 receptor (granulocyte) | CSF3R | 2.78 | 2.54 |
| NM_024636 | STEAP family member 4 | STEAP4 | 2.02 | 2.17 |
| NM_002438 | mannose receptor, C type 1 | MRC1 | −2.46 | −2.16 |
| NM_004829 | natural cytotoxicity triggering receptor 1 | NCR1 | −2.33 | nc |
| NM_006291 | tumor necrosis factor, alpha-induced protein 2 | TNFAIP2 | 2.32 | nc |
| NM_001953 | thymidine phosphorylase | TYMP | 2.13 | 1.89 |
| NM_000860 | hydroxyprostaglandin dehydrogenase 15-(NAD) | HPGD | −2.63 | −2.47 |
| NM_003407 | zinc finger protein 36, C3H type, homolog | ZFP36 | 4.45 | nc |
| NM_000072 | CD36 molecule (thrombospondin receptor) | CD36 | 2.12 | nc |
| NM_000271 | Niemann-Pick disease, type C1 | NPC1 | −2.32 | −2.55 |
| NM_002112 | histidine decarboxylase | HDC | 6.50 | 5.75 |
| AF065214 | phospholipase A2, group IVC (cytosolic, calcium-independent) | PLA2G4C | −2.81 | −3.02 |
| NM_004163 | RAB27B, member RAS oncogene family | RAB27B | −2.37 | −2.58 |
| NM_001553 | insulin-like growth factor binding protein 7 | IGFBP7 | −3.09 | −3.19 |
| NM_005764 | PDZK1 interacting protein 1 | PDZK1IP1 | −6.60 | −6.74 |
: before IVIG treatment.
: after IVIG treatment.
nc: not significantly changed.
Figure 1Genes modulated by IVIg infusion.
A. Graphical representation of the expression of the 23 genes returned to the levels of normal controls after IVIg infusion. B. FC expression, before and after therapy, of the genes represented in panel A with the corresponding colours.
Figure 2Real time RT-PCR of some modulated genes confirms the results of gene array analysis.
Genes selected for validation in PBMC of CVID patients before IVIg treatment. IL8, RGS1 and CCR3 transcripts were increased, whereas TNFRSF17 transcript was decreased in CVID patients when compared to healthy donors. Relative expression levels were calculated for each sample after normalization against the housekeeping genes 18s rRNA, beta-actin and GAPDH. Experiments have been conducted in triplicates. Housekeeping genes: blue bar = 18s rRNA; magenta bar: beta-actin; yellow bar: GAPDH.
Figure 3Flow cytometric analysis of T and B cell populations in CVID patients before and after IVIg infusion.
Data are representative of all the subjects studied. A and B panels show the percentages of CD4+ and CD8+T cell populations before and after IVIg infusion, respectively. Percentages of naïve B cells, centrocytes and switched memory B cells before and after IVIg infusion are displayed in C vs D, E vs F and G vs H panels, respectively.
Figure 4Serum levels of selected soluble mediators in CVID patients before and after IVIg infusion.
The histogram represents the mean of the results obtained in 30 patients. Results are expressed in pg/ml. p values calculated using the Student's t-test for paired samples.