| Literature DB >> 24827980 |
Yu-Shun Yang1, Fei Zhang2, Dan-Jie Tang2, Yong-Hua Yang2, Hai-Liang Zhu2.
Abstract
A series of novel 2-(1,3-diaryl- 4,5-dihydro-1H-pyrazol-5-yl)phenol derivatives (Entities:
Mesh:
Substances:
Year: 2014 PMID: 24827980 PMCID: PMC4020744 DOI: 10.1371/journal.pone.0095702
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Figure 1The structures of previous series I and series II.
Substitutes of the synthesized compounds.
| Compound | R1 | R2 | R3 | R4 | Compound | R1 | R2 | R3 | R4 |
| C1 | F | H | H | H | C13 | F | H | Br | H |
| C2 | Cl | H | H | H | C14 | Cl | H | Br | H |
| C3 | Br | H | H | H | C15 | Br | H | Br | H |
| C4 | CH3 | H | H | H | C16 | CH3 | H | Br | H |
| C5 | OCH3 | H | H | H | C17 | OCH3 | H | Br | H |
| C6 | Cl | Cl | H | H | C18 | Cl | Cl | Br | H |
| C7 | F | H | Cl | H | C19 | F | H | Cl | Cl |
| C8 | Cl | H | Cl | H | C20 | Cl | H | Cl | Cl |
| C9 | Br | H | Cl | H | C21 | Br | H | Cl | Cl |
| C10 | CH3 | H | Cl | H | C22 | CH3 | H | Cl | Cl |
| C11 | OCH3 | H | Cl | H | C23 | OCH3 | H | Cl | Cl |
| C12 | Cl | Cl | Cl | H | C24 | Cl | Cl | Cl | Cl |
Figure 2General synthesis of compounds (C1–C24).
Reagents and Conditions: i) EtOH, 40% NaOH, 0°C, stir, 30 min; rt, stir, 4 h; ii) EtOH, Phenylhydrazine, 80°C, 5 h.
B-RafV600E inhibitory activity and anti-proliferation activity of the synthesized compounds (C1–C24) as well as previous compounds C0A and C0B.
| compounds | IC50 ( | GI50 ( | compounds | IC50 ( | GI50 ( |
| B-RafV600E | WM266.4 | B-RafV600E | WM266.4 | ||
| C1 | 71.90±6.77 | >50 | C13 | 2.73±0.19 | 4.45±0.41 |
| C2 | 0.50±0.04 | 2.01±0.13 | C14 | 2.20±0.20 | 3.69±0.32 |
| C3 | 0.63±0.06 | 2.09±0.18 | C15 | 1.29±0.10 | 2.65±0.19 |
| C4 | 1.49±0.11 | 2.85±0.23 | C16 | 2.78±0.21 | 4.55±0.44 |
| C5 | 0.51±0.05 | 1.98±0.17 | C17 | 0.57±0.05 | 2.03±0.18 |
| C6 | 0.15±0.01 | 1.75±0.12 | C18 | 0.34±0.02 | 1.88±0.15 |
| C7 | 2.60±0.23 | 4.26±0.36 | C19 | 2.26±0.19 | 3.76±0.32 |
| C8 | 2.66±0.19 | 4.39±0.31 | C20 | 2.14±0.19 | 3.59±0.28 |
| C9 | 1.37±0.13 | 2.73±0.21 | C21 | 3.12±0.26 | 5.13±0.49 |
| C10 | 3.24±0.28 | 5.37±0.49 | C22 | 7.37±0.65 | 23.93±1.99 |
| C11 | 1.07±0.08 | 2.43±0.16 | C23 | 1.01±0.08 | 2.38±0.23 |
| C12 | 0.50±0.05 | 1.99±0.13 | C24 | 0.97±0.09 | 2.34±0.17 |
| C0A | 0.19±0.02 | 0.93±0.07 | C0B | 0.23±0.03 | 0.56±0.04 |
| C0A(lit) | 0.20±0.03 | 0.89±0.04 | C0B(lit) | 0.22±0.06 | 0.45±0.03 |
| Erlotinib | 0.06±0.01 | 8.12±0.75 | Vemurafenib | 0.03±0.005 | 0.21±0.02 |
Figure 3Docking models of representative compounds.
(A) 2D molecular docking modeling of compound C6 with 3PSD. (B) 3D model of the interaction between compound C6 and 3PSD bonding site. (C) 2D molecular docking modeling of compound C18 with 3PSD. (D) 2D molecular docking modeling of compound C5 with 3PSD. The H-bonds (green line) are displayed as dotted lines and the amino acid they act on are labeled in green. The π–cation interactions and π–π interactions are shown as orange lines with their corresponding amino acids labeled in yellow. Other important amino acids are labeled in blue.
The docking calculation of the synthesized compounds (C1–C24) and comparisons.
| compounds | -CDOCKER INTERACTION ENERGYΔGb (kcal/mol) | compounds | -CDOCKER INTERACTION ENERGYΔGb (kcal/mol) |
| C1 | 37.0472 | C13 | 43.1905 |
| C2 | 46.3620 | C14 | 43.5959 |
| C3 | 45.9333 | C15 | 44.5970 |
| C4 | 44.3320 | C16 | 43.1568 |
| C5 | 46.3577 | C17 | 46.1456 |
| C6 | 48.6398 | C18 | 47.1071 |
| C7 | 43.2819 | C19 | 43.5431 |
| C8 | 43.2392 | C20 | 43.6496 |
| C9 | 44.4838 | C21 | 42.9416 |
| C10 | 42.8661 | C22 | 41.3252 |
| C11 | 44.9522 | C23 | 45.0561 |
| C12 | 46.3800 | C24 | 45.1426 |
| C0A | 48.0998 | C0B | 47.4951 |
Figure 4The receptor surface model with C6 in 3PSD.
Figure 53D-QSAR of 2-(1,3-diaryl- 4,5-dihydro-1H-pyrazol-5-yl)phenol.
Red contours mean high electron density is expected to increase activity while blue contours mean low electron density is better. Green areas mean steric bulk is better while yellow areas mean small groups are helpful.