Literature DB >> 24826105

Bis(2-meth-oxy-benzyl-ammonium) di-aqua-bis-(di-hydrogen diphosphato-κ(2) O,O')cobaltate(II) dihydrate.

Adel Elboulali1, Ahmed Selmi1, Nicolas Ratel-Ramond2, Mohamed Rzaigui1, Samah Toumi Akriche1.   

Abstract

The title compound, (C8H12NO)2[Co(H2P2O7)2(H2O)2]·2H2O, crystallizes isotypically with its Mn(II) analogue. It consists of alternating layers of organic cations and inorganic complex anions, extending parallel to (100). The complex cobaltate(II) anion exhibits -1 symmetry. Its Co(2+) atom has an octa-hedral coordination sphere, defined by two water mol-ecules in apical positions and two H2P2O7 (2-) ligands in equatorial positions. The cohesion between inorganic and organic layers is accomplished by a set of O-H⋯O and N-H⋯O hydrogen bonds involving the organic cation, the inorganic anion and the remaining lattice water mol-ecules.

Entities:  

Year:  2014        PMID: 24826105      PMCID: PMC3998531          DOI: 10.1107/S1600536814006102

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the isotypic MnII structure, see: Elboulali et al. (2013b ▶). For related structures with diphosphate units, see: Alaoui Tahiri et al. (2003 ▶); Essehli et al. (2005 ▶); Selmi et al. (2006 ▶, 2009 ▶); Ahmed et al. (2006 ▶); Gharbi et al. (1994 ▶); Gharbi & Jouini (2004 ▶); Elboulali et al. (2013a ▶). For distortion index calculations, see: Kobashi et al. (1997 ▶).

Experimental

Crystal data

(C8H12NO)2[Co(H2P2O7)2(H2O)2]·2H2O M = 759.28 Monoclinic, a = 14.050 (5) Å b = 11.971 (5) Å c = 9.161 (5) Å β = 93.718 (5)° V = 1537.6 (12) Å3 Z = 2 Mo Kα radiation μ = 0.85 mm−1 T = 293 K 0.25 × 0.19 × 0.13 mm

Data collection

Nonius KappaCCD diffractometer 33422 measured reflections 4645 independent reflections 3135 reflections with I > 2σ(I) R int = 0.081

Refinement

R[F 2 > 2σ(F 2)] = 0.096 wR(F 2) = 0.266 S = 1.08 4645 reflections 212 parameters 7 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 2.59 e Å−3 Δρmin = −1.26 e Å−3 Data collection: COLLECT (Hooft, 1998 ▶); cell refinement: DIRAX/LSQ (Duisenberg et al., 2000 ▶); data reduction: EVALCCD (Duisenberg et al., 2003 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶) and DIAMOND (Brandenburg & Putz, 2005 ▶); software used to prepare material for publication: WinGX (Farrugia, 2012 ▶). Crystal structure: contains datablock(s) I. DOI: 10.1107/S1600536814006102/wm5011sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814006102/wm5011Isup2.hkl CCDC reference: 992564 Additional supporting information: crystallographic information; 3D view; checkCIF report
(C8H12NO)2[Co(H2P2O7)2(H2O)2]·2H2OF(000) = 786
Mr = 759.28Dx = 1.640 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 33422 reflections
a = 14.050 (5) Åθ = 2.2–30.9°
b = 11.971 (5) ŵ = 0.85 mm1
c = 9.161 (5) ÅT = 293 K
β = 93.718 (5)°Prism, pink
V = 1537.6 (12) Å30.25 × 0.19 × 0.13 mm
Z = 2
Nonius KappaCCD diffractometer3135 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.081
Horizonally mounted graphite crystal monochromatorθmax = 30.9°, θmin = 2.2°
Detector resolution: 9 pixels mm-1h = −20→18
ω and φ CCD rotation images, thick slices scansk = −17→17
33422 measured reflectionsl = −10→13
4645 independent reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.096Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.266H atoms treated by a mixture of independent and constrained refinement
S = 1.08w = 1/[σ2(Fo2) + (0.0687P)2 + 17.5972P] where P = (Fo2 + 2Fc2)/3
4645 reflections(Δ/σ)max = 0.003
212 parametersΔρmax = 2.59 e Å3
7 restraintsΔρmin = −1.26 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Co10.50000.50000.50000.0248 (3)
P10.58873 (11)0.24678 (12)0.46988 (14)0.0240 (3)
P20.38517 (11)0.25622 (12)0.51633 (14)0.0249 (3)
O10.5946 (3)0.3708 (3)0.4662 (4)0.0278 (8)
O20.6336 (3)0.1843 (3)0.3488 (4)0.0302 (9)
O30.6288 (4)0.1972 (4)0.6168 (5)0.0471 (13)
H30.64940.24770.67040.071*
O40.4796 (4)0.2083 (4)0.4534 (6)0.0446 (12)
O50.3993 (3)0.3764 (4)0.5528 (5)0.0309 (9)
O60.3105 (4)0.2386 (5)0.3853 (5)0.0434 (12)
H60.33330.25860.30940.065*
O70.3549 (4)0.1825 (4)0.6378 (4)0.0349 (10)
O1W0.4616 (4)0.4955 (4)0.2753 (5)0.0402 (11)
H1W10.441 (6)0.558 (3)0.240 (8)0.060*
H2W10.435 (5)0.438 (3)0.233 (8)0.060*
O80.8402 (5)0.3749 (6)0.5079 (7)0.0663 (18)
N10.7205 (4)0.4951 (5)0.2793 (6)0.0369 (12)
H1A0.72100.47840.18470.055*
H1B0.67160.54030.29340.055*
H1C0.71450.43270.33070.055*
C10.8971 (5)0.4798 (7)0.3192 (8)0.0454 (17)
C20.9128 (6)0.3901 (7)0.4183 (9)0.0514 (19)
C30.9953 (7)0.3286 (9)0.4206 (12)0.068 (3)
H3A1.00570.27080.48750.082*
C41.0628 (8)0.3536 (11)0.3228 (15)0.085 (4)
H41.11910.31260.32530.101*
C51.0490 (8)0.4362 (13)0.2235 (14)0.087 (4)
H51.09520.45090.15780.105*
C60.9657 (7)0.4997 (10)0.2192 (11)0.071 (3)
H6A0.95590.55550.14930.085*
C70.8106 (5)0.5514 (7)0.3277 (9)0.0474 (17)
H7A0.80660.57600.42800.057*
H7B0.81790.61730.26790.057*
C80.8535 (9)0.2951 (13)0.6208 (15)0.103 (5)
H8A0.85840.22200.57880.154*
H8B0.80030.29730.68120.154*
H8C0.91100.31180.67910.154*
O2W0.7511 (4)0.4927 (5)−0.0240 (6)0.0487 (13)
H1W20.732 (6)0.435 (4)−0.071 (9)0.073*
H2W20.732 (7)0.555 (3)−0.061 (9)0.073*
U11U22U33U12U13U23
Co10.0412 (6)0.0166 (5)0.0165 (4)0.0007 (4)0.0011 (4)0.0000 (4)
P10.0361 (8)0.0222 (7)0.0139 (5)0.0062 (5)0.0016 (5)0.0004 (5)
P20.0336 (7)0.0266 (7)0.0144 (6)−0.0044 (6)0.0011 (5)−0.0018 (5)
O10.031 (2)0.0224 (19)0.030 (2)0.0035 (15)0.0028 (16)0.0026 (15)
O20.047 (3)0.029 (2)0.0150 (16)0.0088 (17)0.0041 (16)−0.0026 (14)
O30.089 (4)0.034 (3)0.0170 (19)0.015 (3)−0.004 (2)0.0004 (17)
O40.050 (3)0.026 (2)0.059 (3)−0.002 (2)0.009 (2)−0.018 (2)
O50.032 (2)0.028 (2)0.034 (2)0.0022 (16)0.0104 (17)−0.0002 (16)
O60.047 (3)0.066 (3)0.0172 (18)−0.019 (2)−0.0035 (18)0.005 (2)
O70.057 (3)0.029 (2)0.0189 (18)−0.0036 (19)0.0000 (18)0.0025 (15)
O1W0.072 (3)0.026 (2)0.0205 (19)0.002 (2)−0.014 (2)−0.0017 (16)
O80.058 (4)0.087 (5)0.052 (3)−0.003 (3)−0.001 (3)0.022 (3)
N10.039 (3)0.040 (3)0.032 (3)−0.001 (2)0.006 (2)−0.003 (2)
C10.035 (4)0.059 (5)0.041 (4)−0.004 (3)−0.006 (3)−0.004 (3)
C20.039 (4)0.058 (5)0.054 (5)−0.003 (3)−0.012 (3)−0.005 (4)
C30.051 (5)0.073 (7)0.078 (7)0.003 (4)−0.021 (5)−0.013 (5)
C40.053 (6)0.099 (9)0.100 (9)0.018 (6)−0.006 (6)−0.037 (8)
C50.062 (7)0.130 (11)0.072 (7)−0.013 (7)0.022 (5)−0.036 (7)
C60.055 (6)0.102 (8)0.055 (5)−0.016 (5)0.007 (4)−0.002 (5)
C70.047 (4)0.046 (4)0.048 (4)0.002 (3)−0.007 (3)−0.002 (3)
C80.069 (7)0.140 (12)0.096 (9)−0.025 (7)−0.019 (6)0.058 (9)
O2W0.056 (3)0.051 (3)0.038 (3)−0.005 (3)−0.003 (2)0.001 (2)
Co1—O1i2.075 (4)N1—H1A0.8900
Co1—O12.075 (4)N1—H1B0.8900
Co1—O1Wi2.095 (4)N1—H1C0.8900
Co1—O1W2.095 (4)C1—C61.393 (12)
Co1—O52.124 (4)C1—C21.414 (12)
Co1—O5i2.124 (4)C1—C71.494 (11)
P1—O11.488 (4)C2—C31.373 (12)
P1—O21.509 (4)C3—C41.379 (17)
P1—O31.543 (4)C3—H3A0.9300
P1—O41.598 (5)C4—C51.349 (18)
P2—O51.488 (5)C4—H40.9300
P2—O71.503 (4)C5—C61.393 (16)
P2—O61.556 (4)C5—H50.9300
P2—O41.588 (5)C6—H6A0.9300
O3—H30.8200C7—H7A0.9700
O6—H60.8200C7—H7B0.9700
O1W—H1W10.86 (2)C8—H8A0.9600
O1W—H2W10.86 (2)C8—H8B0.9600
O8—C21.362 (11)C8—H8C0.9600
O8—C81.411 (12)O2W—H1W20.85 (2)
N1—C71.477 (9)O2W—H2W20.85 (2)
O1i—Co1—O1180.0 (2)C7—N1—H1B109.5
O1i—Co1—O1Wi87.73 (18)H1A—N1—H1B109.5
O1—Co1—O1Wi92.27 (18)C7—N1—H1C109.5
O1i—Co1—O1W92.27 (18)H1A—N1—H1C109.5
O1—Co1—O1W87.73 (18)H1B—N1—H1C109.5
O1Wi—Co1—O1W180.000 (1)C6—C1—C2117.8 (8)
O1i—Co1—O592.42 (16)C6—C1—C7122.5 (8)
O1—Co1—O587.58 (16)C2—C1—C7119.7 (7)
O1Wi—Co1—O585.82 (19)O8—C2—C3125.7 (9)
O1W—Co1—O594.18 (19)O8—C2—C1113.4 (7)
O1i—Co1—O5i87.58 (16)C3—C2—C1120.9 (9)
O1—Co1—O5i92.42 (16)C2—C3—C4119.3 (11)
O1Wi—Co1—O5i94.18 (19)C2—C3—H3A120.4
O1W—Co1—O5i85.82 (19)C4—C3—H3A120.4
O5—Co1—O5i180.00 (16)C5—C4—C3121.5 (11)
O1—P1—O2116.8 (2)C5—C4—H4119.2
O1—P1—O3112.7 (3)C3—C4—H4119.2
O2—P1—O3107.7 (3)C4—C5—C6120.1 (11)
O1—P1—O4109.8 (2)C4—C5—H5119.9
O2—P1—O4103.4 (3)C6—C5—H5119.9
O3—P1—O4105.4 (3)C1—C6—C5120.3 (11)
O5—P2—O7116.2 (2)C1—C6—H6A119.9
O5—P2—O6112.2 (3)C5—C6—H6A119.9
O7—P2—O6106.4 (3)N1—C7—C1114.0 (6)
O5—P2—O4109.2 (2)N1—C7—H7A108.7
O7—P2—O4109.9 (3)C1—C7—H7A108.7
O6—P2—O4102.0 (3)N1—C7—H7B108.7
P1—O1—Co1134.7 (3)C1—C7—H7B108.7
P1—O3—H3109.5H7A—C7—H7B107.6
P2—O4—P1132.9 (3)O8—C8—H8A109.5
P2—O5—Co1134.7 (2)O8—C8—H8B109.5
P2—O6—H6109.5H8A—C8—H8B109.5
Co1—O1W—H1W1114 (5)O8—C8—H8C109.5
Co1—O1W—H2W1123 (5)H8A—C8—H8C109.5
H1W1—O1W—H2W1114 (3)H8B—C8—H8C109.5
C2—O8—C8117.6 (8)H1W2—O2W—H2W2116 (3)
C7—N1—H1A109.5
O2—P1—O1—Co1136.9 (3)O1Wi—Co1—O5—P2−116.7 (4)
O3—P1—O1—Co1−97.5 (4)O1W—Co1—O5—P263.3 (4)
O4—P1—O1—Co119.7 (4)O5i—Co1—O5—P2−67 (100)
O1i—Co1—O1—P1−141 (100)C8—O8—C2—C35.4 (14)
O1Wi—Co1—O1—P188.9 (4)C8—O8—C2—C1−173.5 (9)
O1W—Co1—O1—P1−91.1 (4)C6—C1—C2—O8−177.8 (8)
O5—Co1—O1—P13.2 (4)C7—C1—C2—O84.2 (10)
O5i—Co1—O1—P1−176.8 (4)C6—C1—C2—C33.3 (12)
O5—P2—O4—P123.1 (6)C7—C1—C2—C3−174.7 (8)
O7—P2—O4—P1−105.4 (5)O8—C2—C3—C4179.9 (9)
O6—P2—O4—P1142.0 (5)C1—C2—C3—C4−1.3 (14)
O1—P1—O4—P2−39.1 (6)C2—C3—C4—C5−0.8 (16)
O2—P1—O4—P2−164.5 (5)C3—C4—C5—C60.8 (18)
O3—P1—O4—P282.6 (5)C2—C1—C6—C5−3.3 (14)
O7—P2—O5—Co1140.4 (4)C7—C1—C6—C5174.7 (9)
O6—P2—O5—Co1−96.9 (4)C4—C5—C6—C11.3 (17)
O4—P2—O5—Co115.5 (5)C6—C1—C7—N1111.2 (9)
O1i—Co1—O5—P2155.7 (4)C2—C1—C7—N1−70.9 (9)
O1—Co1—O5—P2−24.3 (4)
D—H···AD—HH···AD···AD—H···A
O3—H3···O2ii0.821.852.553 (6)143
O6—H6···O7iii0.821.772.571 (6)166
O1W—H1W1···O2iv0.86 (2)1.98 (3)2.827 (6)168 (7)
O1W—H2W1···O7iii0.86 (2)2.00 (2)2.851 (6)171 (8)
N1—H1A···O2W0.891.992.840 (8)159
N1—H1A···O3iii0.892.532.988 (7)113
N1—H1B···O5i0.892.042.810 (7)145
N1—H1C···O10.892.282.944 (7)131
N1—H1C···O80.892.422.972 (9)120
O2W—H1W2···O2iii0.85 (2)2.08 (4)2.885 (7)157 (9)
O2W—H2W2···O7iv0.85 (2)2.06 (4)2.876 (7)161 (9)
Table 1

Selected bond lengths (Å)

Co1—O12.075 (4)
Co1—O1W 2.095 (4)
Co1—O52.124 (4)
Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O3—H3⋯O2i 0.821.852.553 (6)143
O6—H6⋯O7ii 0.821.772.571 (6)166
O1W—H1W1⋯O2iii 0.86 (2)1.98 (3)2.827 (6)168 (7)
O1W—H2W1⋯O7ii 0.86 (2)2.00 (2)2.851 (6)171 (8)
N1—H1A⋯O2W 0.891.992.840 (8)159
N1—H1A⋯O3ii 0.892.532.988 (7)113
N1—H1B⋯O5iv 0.892.042.810 (7)145
N1—H1C⋯O10.892.282.944 (7)131
N1—H1C⋯O80.892.422.972 (9)120
O2W—H1W2⋯O2ii 0.85 (2)2.08 (4)2.885 (7)157 (9)
O2W—H2W2⋯O7iii 0.85 (2)2.06 (4)2.876 (7)161 (9)

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

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