Literature DB >> 23424495

Bis(4-meth-oxy-benzyl-ammonium) dihydrogen diphosphate.

Adel Elboulali1, Samah Akriche, Salem S Al-Deyab, Mohamed Rzaigui.   

Abstract

In the title compound, 2C(8)H(12)NO(+)·H(2)P(2)O(7) (2-), the linked PO(4) groups of the diphosphate anion are almost eclipsed and the P-O-P angle is 134.45 (7)°. In the crystal, infinite ribbons of H(2)P(2)O(7) (2-) anions propagate in [100], being linked by strong O-H⋯O hydrogen bonds. The 4-meth-oxy-benzyl-ammonium cations bond to the diphosphate chains by N-H⋯O and C-H⋯O links, and are themselves linked by C-H⋯π inter-actions.

Entities:  

Year:  2013        PMID: 23424495      PMCID: PMC3569749          DOI: 10.1107/S1600536812051616

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to diphosphates, see: Ballarini et al. (2006 ▶); For inter­molecular inter­actions, see: Brown (1976 ▶); Tiekink & Zukerman-Schpector (2012 ▶). For a related structure, see: Ahmed et al. (2006 ▶).

Experimental

Crystal data

2C8H12NOH2P2O7 2− M = 452.33 Triclinic, a = 9.184 (3) Å b = 6.737 (4) Å c = 17.066 (2) Å α = 97.61 (2)° β = 91.39 (4)° γ = 85.72 (3)° V = 1043.6 (7) Å3 Z = 2 Ag Kα radiation λ = 0.56087 Å μ = 0.14 mm−1 T = 296 K 0.30 × 0.25 × 0.17 mm

Data collection

Enraf–Nonius CAD-4 diffractometer 12631 measured reflections 10225 independent reflections 5553 reflections with I > 2σ(I) R int = 0.026 2 standard reflections every 120 min intensity decay: none

Refinement

R[F 2 > 2σ(F 2)] = 0.055 wR(F 2) = 0.143 S = 0.98 10225 reflections 268 parameters H-atom parameters constrained Δρmax = 0.38 e Å−3 Δρmin = −0.51 e Å−3 Data collection: CAD-4 EXPRESS (Enraf–Nonius, 1994 ▶); cell refinement: CAD-4 EXPRESS; data reduction: XCAD4 (Harms & Wocadlo, 1995 ▶); program(s) used to solve structure: SHELXS86 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 2012 ▶) and DIAMOND (Brandenburg & Putz, 2005 ▶); software used to prepare material for publication: WinGX (Farrugia, 2012 ▶). Click here for additional data file. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812051616/hb7003sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812051616/hb7003Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536812051616/hb7003Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
2C8H12NO+·H2O7P22Z = 2
Mr = 452.33F(000) = 476
Triclinic, P1Dx = 1.439 Mg m3
a = 9.184 (3) ÅAg Kα radiation, λ = 0.56087 Å
b = 6.737 (4) ÅCell parameters from 25 reflections
c = 17.066 (2) Åθ = 9–11°
α = 97.61 (2)°µ = 0.14 mm1
β = 91.39 (4)°T = 296 K
γ = 85.72 (3)°Prism, colorless
V = 1043.6 (7) Å30.30 × 0.25 × 0.17 mm
Enraf–Nonius CAD-4 diffractometerRint = 0.026
Radiation source: fine-focus sealed tubeθmax = 28.0°, θmin = 2.0°
Graphite monochromatorh = −15→15
non–profiled ω scansk = −11→11
12631 measured reflectionsl = −4→28
10225 independent reflections2 standard reflections every 120 min
5553 reflections with I > 2σ(I) intensity decay: none
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.055Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.143H-atom parameters constrained
S = 0.98w = 1/[σ2(Fo2) + (0.0674P)2] where P = (Fo2 + 2Fc2)/3
10225 reflections(Δ/σ)max = 0.001
268 parametersΔρmax = 0.38 e Å3
0 restraintsΔρmin = −0.51 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
P10.77375 (4)−0.16843 (5)0.42717 (2)0.02283 (9)
P20.71445 (4)0.14070 (5)0.56549 (2)0.02389 (9)
O10.65658 (11)−0.21336 (18)0.36026 (7)0.0321 (2)
H10.5815−0.24280.37960.048*
O20.90518 (11)−0.09884 (18)0.39193 (7)0.0347 (3)
O30.80044 (12)−0.33687 (15)0.47500 (7)0.0309 (2)
O40.69102 (12)0.02214 (16)0.47816 (7)0.0327 (3)
O50.85320 (11)0.25556 (17)0.55945 (8)0.0361 (3)
H50.92180.20060.58190.054*
O60.58394 (11)0.29007 (16)0.57185 (7)0.0341 (3)
O70.73241 (13)−0.00463 (17)0.62306 (7)0.0359 (3)
O80.65303 (18)0.1234 (3)0.06727 (9)0.0624 (4)
O90.14301 (19)0.4144 (3)0.07212 (10)0.0663 (5)
N10.98380 (14)0.31496 (19)0.40133 (8)0.0301 (3)
H1A0.91100.40560.41650.045*
H1B1.05680.32660.43650.045*
H1C0.95230.19230.39800.045*
N20.45655 (14)0.30089 (19)0.39890 (8)0.0323 (3)
H2A0.41830.42640.41060.048*
H2B0.51810.27070.43740.048*
H2C0.38540.21710.39410.048*
C11.03636 (18)0.3492 (3)0.32239 (10)0.0365 (4)
H1D1.12770.26970.31130.044*
H1E1.05540.48950.32420.044*
C20.92910 (18)0.2956 (3)0.25659 (10)0.0327 (3)
C30.8548 (2)0.4405 (3)0.21786 (12)0.0419 (4)
H30.86760.57510.23480.050*
C40.7619 (2)0.3905 (3)0.15447 (12)0.0473 (5)
H40.71440.49060.12860.057*
C50.7401 (2)0.1919 (3)0.12986 (11)0.0443 (4)
C60.8102 (3)0.0456 (3)0.16945 (12)0.0507 (5)
H60.7930−0.08850.15430.061*
C70.9056 (2)0.0964 (3)0.23126 (11)0.0447 (4)
H70.9548−0.00410.25620.054*
C80.5843 (3)0.2674 (5)0.02229 (15)0.0744 (8)
H8A0.51980.35910.05550.112*
H8B0.52930.2004−0.02050.112*
H8C0.65720.34020.00150.112*
C90.53647 (18)0.2817 (3)0.32319 (11)0.0395 (4)
H9A0.58680.14920.31330.047*
H9B0.60910.38010.32710.047*
C100.43368 (18)0.3132 (3)0.25591 (11)0.0360 (4)
C110.3878 (2)0.5050 (3)0.23911 (12)0.0465 (5)
H110.42360.61630.26950.056*
C120.2903 (3)0.5326 (3)0.17823 (13)0.0526 (5)
H120.26060.66200.16820.063*
C130.2364 (2)0.3700 (3)0.13206 (12)0.0455 (4)
C140.2793 (2)0.1798 (3)0.14782 (12)0.0491 (5)
H140.24330.06920.11710.059*
C150.3766 (2)0.1526 (3)0.20981 (12)0.0445 (4)
H150.40380.02310.22050.053*
C160.0827 (3)0.2508 (4)0.02453 (16)0.0760 (8)
H16A0.16010.16150.00040.114*
H16B0.02100.3002−0.01590.114*
H16C0.02630.17990.05690.114*
U11U22U33U12U13U23
P10.01629 (14)0.02364 (17)0.0285 (2)−0.00016 (12)−0.00173 (13)0.00439 (14)
P20.01804 (15)0.02244 (16)0.0311 (2)−0.00183 (12)−0.00096 (14)0.00320 (14)
O10.0211 (5)0.0425 (6)0.0319 (6)−0.0046 (4)−0.0042 (4)0.0013 (5)
O20.0191 (4)0.0422 (6)0.0458 (7)−0.0045 (4)0.0003 (5)0.0157 (5)
O30.0299 (5)0.0262 (5)0.0373 (7)0.0021 (4)−0.0002 (5)0.0096 (5)
O40.0319 (5)0.0297 (5)0.0337 (6)0.0072 (4)−0.0070 (5)−0.0003 (5)
O50.0195 (5)0.0337 (6)0.0582 (8)−0.0066 (4)−0.0068 (5)0.0160 (5)
O60.0200 (4)0.0297 (5)0.0504 (8)0.0015 (4)0.0020 (5)−0.0009 (5)
O70.0371 (6)0.0362 (6)0.0371 (7)−0.0085 (5)−0.0051 (5)0.0124 (5)
O80.0640 (10)0.0773 (11)0.0443 (9)−0.0109 (8)−0.0196 (8)0.0029 (8)
O90.0745 (11)0.0750 (11)0.0490 (10)−0.0068 (9)−0.0228 (8)0.0100 (8)
N10.0280 (6)0.0303 (6)0.0313 (7)0.0010 (5)−0.0034 (5)0.0038 (5)
N20.0325 (6)0.0291 (6)0.0364 (8)−0.0037 (5)−0.0072 (6)0.0090 (6)
C10.0319 (8)0.0474 (9)0.0313 (9)−0.0057 (7)0.0016 (7)0.0071 (7)
C20.0343 (8)0.0377 (8)0.0265 (8)−0.0014 (6)0.0024 (6)0.0059 (7)
C30.0450 (10)0.0372 (9)0.0432 (11)0.0004 (7)−0.0025 (8)0.0070 (8)
C40.0459 (10)0.0512 (11)0.0445 (12)0.0066 (8)−0.0079 (9)0.0121 (9)
C50.0417 (9)0.0587 (12)0.0319 (10)−0.0050 (8)−0.0020 (8)0.0037 (9)
C60.0744 (14)0.0412 (10)0.0369 (11)−0.0123 (9)−0.0061 (10)0.0036 (8)
C70.0614 (12)0.0396 (9)0.0331 (10)0.0004 (8)−0.0048 (9)0.0085 (8)
C80.0625 (15)0.109 (2)0.0515 (15)−0.0036 (14)−0.0244 (12)0.0165 (15)
C90.0296 (7)0.0436 (9)0.0453 (11)0.0017 (7)0.0023 (7)0.0077 (8)
C100.0348 (8)0.0395 (8)0.0341 (9)−0.0020 (7)0.0033 (7)0.0067 (7)
C110.0615 (12)0.0386 (9)0.0396 (11)−0.0078 (8)−0.0079 (9)0.0058 (8)
C120.0701 (14)0.0441 (10)0.0449 (12)−0.0030 (10)−0.0107 (10)0.0126 (9)
C130.0470 (10)0.0570 (11)0.0328 (10)−0.0039 (9)−0.0013 (8)0.0074 (9)
C140.0541 (11)0.0489 (11)0.0431 (12)−0.0122 (9)−0.0006 (9)−0.0028 (9)
C150.0494 (10)0.0379 (9)0.0459 (12)−0.0026 (8)0.0020 (9)0.0043 (8)
C160.0716 (17)0.095 (2)0.0559 (16)−0.0066 (15)−0.0233 (13)−0.0054 (14)
P1—O31.4860 (13)C3—C41.383 (3)
P1—O21.4942 (12)C3—H30.9300
P1—O11.5656 (13)C4—C51.376 (3)
P1—O41.6042 (13)C4—H40.9300
P2—O71.4744 (13)C5—C61.380 (3)
P2—O61.5028 (12)C6—C71.379 (3)
P2—O51.5517 (12)C6—H60.9300
P2—O41.6126 (12)C7—H70.9300
O1—H10.8200C8—H8A0.9600
O5—H50.8200C8—H8B0.9600
O8—C51.370 (2)C8—H8C0.9600
O8—C81.418 (3)C9—C101.495 (3)
O9—C131.368 (2)C9—H9A0.9700
O9—C161.419 (3)C9—H9B0.9700
N1—C11.494 (2)C10—C151.380 (3)
N1—H1A0.8900C10—C111.393 (3)
N1—H1B0.8900C11—C121.377 (3)
N1—H1C0.8900C11—H110.9300
N2—C91.487 (2)C12—C131.378 (3)
N2—H2A0.8900C12—H120.9300
N2—H2B0.8900C13—C141.371 (3)
N2—H2C0.8900C14—C151.390 (3)
C1—C21.501 (2)C14—H140.9300
C1—H1D0.9700C15—H150.9300
C1—H1E0.9700C16—H16A0.9600
C2—C31.380 (2)C16—H16B0.9600
C2—C71.386 (3)C16—H16C0.9600
O3—P1—O2116.25 (7)O8—C5—C6115.48 (19)
O3—P1—O1112.16 (7)C4—C5—C6119.39 (18)
O2—P1—O1108.81 (7)C7—C6—C5120.56 (19)
O3—P1—O4110.72 (7)C7—C6—H6119.7
O2—P1—O4107.92 (8)C5—C6—H6119.7
O1—P1—O499.63 (6)C6—C7—C2120.72 (18)
O7—P2—O6118.73 (8)C6—C7—H7119.6
O7—P2—O5112.51 (7)C2—C7—H7119.6
O6—P2—O5108.43 (7)O8—C8—H8A109.5
O7—P2—O4109.41 (7)O8—C8—H8B109.5
O6—P2—O4101.55 (7)H8A—C8—H8B109.5
O5—P2—O4104.81 (8)O8—C8—H8C109.5
P1—O1—H1109.5H8A—C8—H8C109.5
P1—O4—P2134.45 (7)H8B—C8—H8C109.5
P2—O5—H5109.5N2—C9—C10110.84 (14)
C5—O8—C8117.59 (19)N2—C9—H9A109.5
C13—O9—C16117.15 (19)C10—C9—H9A109.5
C1—N1—H1A109.5N2—C9—H9B109.5
C1—N1—H1B109.5C10—C9—H9B109.5
H1A—N1—H1B109.5H9A—C9—H9B108.1
C1—N1—H1C109.5C15—C10—C11117.43 (18)
H1A—N1—H1C109.5C15—C10—C9120.98 (17)
H1B—N1—H1C109.5C11—C10—C9121.55 (17)
C9—N2—H2A109.5C12—C11—C10121.12 (18)
C9—N2—H2B109.5C12—C11—H11119.4
H2A—N2—H2B109.5C10—C11—H11119.4
C9—N2—H2C109.5C11—C12—C13120.5 (2)
H2A—N2—H2C109.5C11—C12—H12119.8
H2B—N2—H2C109.5C13—C12—H12119.8
N1—C1—C2112.96 (14)O9—C13—C14124.96 (19)
N1—C1—H1D109.0O9—C13—C12115.6 (2)
C2—C1—H1D109.0C14—C13—C12119.42 (19)
N1—C1—H1E109.0C13—C14—C15119.92 (18)
C2—C1—H1E109.0C13—C14—H14120.0
H1D—C1—H1E107.8C15—C14—H14120.0
C3—C2—C7117.96 (17)C10—C15—C14121.60 (19)
C3—C2—C1121.67 (16)C10—C15—H15119.2
C7—C2—C1120.33 (16)C14—C15—H15119.2
C2—C3—C4121.69 (18)O9—C16—H16A109.5
C2—C3—H3119.2O9—C16—H16B109.5
C4—C3—H3119.2H16A—C16—H16B109.5
C5—C4—C3119.64 (18)O9—C16—H16C109.5
C5—C4—H4120.2H16A—C16—H16C109.5
C3—C4—H4120.2H16B—C16—H16C109.5
O8—C5—C4125.13 (19)
O3—P1—O4—P247.66 (13)C5—C6—C7—C22.2 (3)
O2—P1—O4—P2−80.60 (12)C3—C2—C7—C6−0.3 (3)
O1—P1—O4—P2165.91 (11)C1—C2—C7—C6−178.26 (18)
O7—P2—O4—P1−48.92 (13)N2—C9—C10—C15−94.9 (2)
O6—P2—O4—P1−175.23 (10)N2—C9—C10—C1182.7 (2)
O5—P2—O4—P171.95 (12)C15—C10—C11—C12−0.7 (3)
N1—C1—C2—C3110.56 (19)C9—C10—C11—C12−178.38 (19)
N1—C1—C2—C7−71.6 (2)C10—C11—C12—C13−0.4 (4)
C7—C2—C3—C4−1.4 (3)C16—O9—C13—C142.2 (3)
C1—C2—C3—C4176.49 (18)C16—O9—C13—C12−178.6 (2)
C2—C3—C4—C51.2 (3)C11—C12—C13—O9−178.5 (2)
C8—O8—C5—C42.6 (3)C11—C12—C13—C140.8 (3)
C8—O8—C5—C6−177.0 (2)O9—C13—C14—C15179.08 (19)
C3—C4—C5—O8−178.81 (19)C12—C13—C14—C15−0.1 (3)
C3—C4—C5—C60.7 (3)C11—C10—C15—C141.3 (3)
O8—C5—C6—C7177.14 (19)C9—C10—C15—C14179.06 (18)
C4—C5—C6—C7−2.4 (3)C13—C14—C15—C10−0.9 (3)
D—H···AD—HH···AD···AD—H···A
O1—H1···O6i0.821.822.6347 (18)176
O5—H5···O2ii0.821.752.5535 (18)164
N1—H1A···O3iii0.892.092.941 (2)160
N1—H1B···O3ii0.891.972.857 (2)172
N1—H1C···O20.892.032.915 (2)173
N2—H2B···O60.892.353.156 (2)151
N2—H2A···O6iv0.891.892.734 (2)157
N2—H2B···O40.892.383.150 (2)145
N2—H2C···O7i0.891.852.724 (2)168
C1—H1D···O7ii0.972.493.242 (3)134
C7—H7···O20.932.543.195 (2)127
C16—H16C···Cg1v0.962.933.73 (7)142
C8—H8A···Cg20.962.973.72 (7)137
C1—H1D···Cg2vi0.972.903.54 (7)124
Table 1

Hydrogen-bond geometry (Å, °)

Cg1 and Cg2 are the centroids of the C2–C7 and C10–C15 rings, respectively.

D—H⋯A D—HH⋯A DA D—H⋯A
O1—H1⋯O6i 0.821.822.6347 (18)176
O5—H5⋯O2ii 0.821.752.5535 (18)164
N1—H1A⋯O3iii 0.892.092.941 (2)160
N1—H1B⋯O3ii 0.891.972.857 (2)172
N1—H1C⋯O20.892.032.915 (2)173
N2—H2B⋯O60.892.353.156 (2)151
N2—H2A⋯O6iv 0.891.892.734 (2)157
N2—H2B⋯O40.892.383.150 (2)145
N2—H2C⋯O7i 0.891.852.724 (2)168
C1—H1D⋯O7ii 0.972.493.242 (3)134
C7—H7⋯O20.932.543.195 (2)127
C16—H16CCg1v 0.962.933.73 (7)142
C8—H8ACg20.962.973.72 (7)137
C1—H1DCg2vi 0.972.903.54 (7)124

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) .

  1 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

  1 in total
  3 in total

1.  Bis(2-meth-oxy-benzyl-ammonium) di-aqua-bis-(di-hydrogen diphosphato-κ(2) O,O')manganate(II) dihydrate.

Authors:  Adel Elboulali; Samah Akriche; Mohamed Rzaigui
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-10-02

2.  Bis(2-meth-oxy-benzyl-ammonium) di-aqua-bis-(di-hydrogen diphosphato-κ(2) O,O')cobaltate(II) dihydrate.

Authors:  Adel Elboulali; Ahmed Selmi; Nicolas Ratel-Ramond; Mohamed Rzaigui; Samah Toumi Akriche
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-03-26

3.  Bis(benzyl-ammonium) di-hydrogen diphosphate.

Authors:  Ahlem Ben Saad; Adel Elboulali; Nicolas Ratel-Ramond; Rzaigui Mohamed; Samah Akriche Toumi
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-12-04
  3 in total

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