Literature DB >> 24821199

Oxygen spectroscopy and polarization-dependent imaging contrast (PIC)-mapping of calcium carbonate minerals and biominerals.

Ross T DeVol1, Rebecca A Metzler, Lee Kabalah-Amitai, Boaz Pokroy, Yael Politi, Assaf Gal, Lia Addadi, Steve Weiner, Alejandro Fernandez-Martinez, Raffaella Demichelis, Julian D Gale, Johannes Ihli, Fiona C Meldrum, Adam Z Blonsky, Christopher E Killian, C B Salling, Anthony T Young, Matthew A Marcus, Andreas Scholl, Andrew Doran, Catherine Jenkins, Hans A Bechtel, Pupa U P A Gilbert.   

Abstract

X-ray absorption near-edge structure (XANES) spectroscopy and spectromicroscopy have been extensively used to characterize biominerals. Using either Ca or C spectra, unique information has been obtained regarding amorphous biominerals and nanocrystal orientations. Building on these results, we demonstrate that recording XANES spectra of calcium carbonate at the oxygen K-edge enables polarization-dependent imaging contrast (PIC) mapping with unprecedented contrast, signal-to-noise ratio, and magnification. O and Ca spectra are presented for six calcium carbonate minerals: aragonite, calcite, vaterite, monohydrocalcite, and both hydrated and anhydrous amorphous calcium carbonate. The crystalline minerals reveal excellent agreement of the extent and direction of polarization dependences in simulated and experimental XANES spectra due to X-ray linear dichroism. This effect is particularly strong for aragonite, calcite, and vaterite. In natural biominerals, oxygen PIC-mapping generated high-magnification maps of unprecedented clarity from nacre and prismatic structures and their interface in Mytilus californianus shells. These maps revealed blocky aragonite crystals at the nacre-prismatic boundary and the narrowest calcite needle-prisms. In the tunic spicules of Herdmania momus, O PIC-mapping revealed the size and arrangement of some of the largest vaterite single crystals known. O spectroscopy therefore enables the simultaneous measurement of chemical and orientational information in CaCO3 biominerals and is thus a powerful means for analyzing these and other complex materials. As described here, PIC-mapping and spectroscopy at the O K-edge are methods for gathering valuable data that can be carried out using spectromicroscopy beamlines at most synchrotrons without the expense of additional equipment.

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Year:  2014        PMID: 24821199     DOI: 10.1021/jp503700g

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  15 in total

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Authors:  Chang-Yu Sun; László Gránásy; Cayla A Stifler; Tal Zaquin; Rajesh V Chopdekar; Nobumichi Tamura; James C Weaver; Jun A Y Zhang; Stefano Goffredo; Giuseppe Falini; Matthew A Marcus; Tamás Pusztai; Vanessa Schoeppler; Tali Mass; Pupa U P A Gilbert
Journal:  Acta Biomater       Date:  2020-06-23       Impact factor: 8.947

2.  Amorphous calcium carbonate particles form coral skeletons.

Authors:  Tali Mass; Anthony J Giuffre; Chang-Yu Sun; Cayla A Stifler; Matthew J Frazier; Maayan Neder; Nobumichi Tamura; Camelia V Stan; Matthew A Marcus; Pupa U P A Gilbert
Journal:  Proc Natl Acad Sci U S A       Date:  2017-08-28       Impact factor: 11.205

3.  Oxygen K-edge X-ray Absorption Spectra.

Authors:  Federica Frati; Myrtille O J Y Hunault; Frank M F de Groot
Journal:  Chem Rev       Date:  2020-04-10       Impact factor: 60.622

4.  Loss of biological control of enamel mineralization in amelogenin-phosphorylation-deficient mice.

Authors:  Cayla A Stifler; Hajime Yamazaki; Pupa U P A Gilbert; Henry C Margolis; Elia Beniash
Journal:  J Struct Biol       Date:  2022-02-25       Impact factor: 3.234

5.  Avian eggshell formation reveals a new paradigm for vertebrate mineralization via vesicular amorphous calcium carbonate.

Authors:  Lilian Stapane; Nathalie Le Roy; Jacky Ezagal; Alejandro B Rodriguez-Navarro; Valérie Labas; Lucie Combes-Soia; Maxwell T Hincke; Joël Gautron
Journal:  J Biol Chem       Date:  2020-08-18       Impact factor: 5.157

6.  Biomineral shell formation under ocean acidification: a shift from order to chaos.

Authors:  Susan C Fitzer; Peter Chung; Francesco Maccherozzi; Sarnjeet S Dhesi; Nicholas A Kamenos; Vernon R Phoenix; Maggie Cusack
Journal:  Sci Rep       Date:  2016-02-15       Impact factor: 4.379

7.  Nanoscale synchrotron X-ray speciation of iron and calcium compounds in amyloid plaque cores from Alzheimer's disease subjects.

Authors:  James Everett; Joanna F Collingwood; Vindy Tjendana-Tjhin; Jake Brooks; Frederik Lermyte; Germán Plascencia-Villa; Ian Hands-Portman; Jon Dobson; George Perry; Neil D Telling
Journal:  Nanoscale       Date:  2018-07-05       Impact factor: 7.790

8.  A vacuole-like compartment concentrates a disordered calcium phase in a key coccolithophorid alga.

Authors:  Sanja Sviben; Assaf Gal; Matthew A Hood; Luca Bertinetti; Yael Politi; Mathieu Bennet; Praveen Krishnamoorthy; Andreas Schertel; Richard Wirth; Andrea Sorrentino; Eva Pereiro; Damien Faivre; André Scheffel
Journal:  Nat Commun       Date:  2016-04-14       Impact factor: 14.919

9.  Transformation of ACC into aragonite and the origin of the nanogranular structure of nacre.

Authors:  Elena Macías-Sánchez; Marc G Willinger; Carlos M Pina; Antonio G Checa
Journal:  Sci Rep       Date:  2017-10-05       Impact factor: 4.379

10.  Minerals in the pre-settled coral Stylophora pistillata crystallize via protein and ion changes.

Authors:  Anat Akiva; Maayan Neder; Keren Kahil; Rotem Gavriel; Iddo Pinkas; Gil Goobes; Tali Mass
Journal:  Nat Commun       Date:  2018-05-14       Impact factor: 14.919

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