Literature DB >> 24818174

White matter structure assessment from reduced HARDI data using low-rank polynomial approximations.

Yaniv Gur1, Fangxiang Jiao2, Stella Xinghua Zhu, Chris R Johnson.   

Abstract

Assessing white matter fiber orientations directly from DWI measurements in single-shell HARDI has many advantages. One of these advantages is the ability to model multiple fibers using fewer parameters than are required to describe an ODF and, thus, reduce the number of DW samples needed for the reconstruction. However, fitting a model directly to the data using Gaussian mixture, for instance, is known as an initialization-dependent unstable process. This paper presents a novel direct fitting technique for single-shell HARDI that enjoys the advantages of direct fitting without sacrificing the accuracy and stability even when the number of gradient directions is relatively low. This technique is based on a spherical deconvolution technique and decomposition of a homogeneous polynomial into a sum of powers of linear forms, known as a symmetric tensor decomposition. The fiber-ODF (fODF), which is described by a homogeneous polynomial, is approximated here by a discrete sum of even-order linear-forms that are directly related to rank-1 tensors and represent single-fibers. This polynomial approximation is convolved to a single-fiber response function, and the result is optimized against the DWI measurements to assess the fiber orientations and the volume fractions directly. This formulation is accompanied by a robust iterative alternating numerical scheme which is based on the Levenberg-Marquardt technique. Using simulated data and in vivo, human brain data we show that the proposed algorithm is stable, accurate and can model complex fiber structures using only 12 gradient directions.

Entities:  

Year:  2012        PMID: 24818174      PMCID: PMC4013549     

Source DB:  PubMed          Journal:  Med Image Comput Comput Assist Interv


  17 in total

1.  High angular resolution diffusion imaging reveals intravoxel white matter fiber heterogeneity.

Authors:  David S Tuch; Timothy G Reese; Mette R Wiegell; Nikos Makris; John W Belliveau; Van J Wedeen
Journal:  Magn Reson Med       Date:  2002-10       Impact factor: 4.668

2.  Apparent diffusion coefficients from high angular resolution diffusion imaging: estimation and applications.

Authors:  Maxime Descoteaux; Elaine Angelino; Shaun Fitzgibbons; Rachid Deriche
Journal:  Magn Reson Med       Date:  2006-08       Impact factor: 4.668

Review 3.  Multiple-fiber reconstruction algorithms for diffusion MRI.

Authors:  Daniel C Alexander
Journal:  Ann N Y Acad Sci       Date:  2005-12       Impact factor: 5.691

4.  Parametric spherical deconvolution: inferring anatomical connectivity using diffusion MR imaging.

Authors:  Enrico Kaden; Thomas R Knösche; Alfred Anwander
Journal:  Neuroimage       Date:  2007-05-18       Impact factor: 6.556

5.  On computing the underlying fiber directions from the diffusion orientation distribution function.

Authors:  Luke Bloy; Ragini Verma
Journal:  Med Image Comput Comput Assist Interv       Date:  2008

6.  Estimating crossing fibers: a tensor decomposition approach.

Authors:  Thomas Schultz; Hans-Peter Seidel
Journal:  IEEE Trans Vis Comput Graph       Date:  2008 Nov-Dec       Impact factor: 4.579

7.  A polynomial approach for maxima extraction and its application to tractography in HARDI.

Authors:  Aurobrata Ghosh; Demian Wassermann; Rachid Deriche
Journal:  Inf Process Med Imaging       Date:  2011

8.  Detection of crossing white matter fibers with high-order tensors and rank-k decompositions.

Authors:  Fangxiang Jiao; Yaniv Gur; Chris R Johnson; Sarang Joshi
Journal:  Inf Process Med Imaging       Date:  2011

9.  How does angular resolution affect diffusion imaging measures?

Authors:  Liang Zhan; Alex D Leow; Neda Jahanshad; Ming-Chang Chiang; Marina Barysheva; Agatha D Lee; Arthur W Toga; Katie L McMahon; Greig I de Zubicaray; Margaret J Wright; Paul M Thompson
Journal:  Neuroimage       Date:  2009-10-09       Impact factor: 6.556

10.  Probabilistic diffusion tractography with multiple fibre orientations: What can we gain?

Authors:  T E J Behrens; H Johansen Berg; S Jbabdi; M F S Rushworth; M W Woolrich
Journal:  Neuroimage       Date:  2006-10-27       Impact factor: 6.556

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  1 in total

1.  Sparse Reconstruction Challenge for diffusion MRI: Validation on a physical phantom to determine which acquisition scheme and analysis method to use?

Authors:  Lipeng Ning; Frederik Laun; Yaniv Gur; Edward V R DiBella; Samuel Deslauriers-Gauthier; Thinhinane Megherbi; Aurobrata Ghosh; Mauro Zucchelli; Gloria Menegaz; Rutger Fick; Samuel St-Jean; Michael Paquette; Ramon Aranda; Maxime Descoteaux; Rachid Deriche; Lauren O'Donnell; Yogesh Rathi
Journal:  Med Image Anal       Date:  2015-11-10       Impact factor: 8.545

  1 in total

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