Literature DB >> 24815621

Light illumination and detection patterns for fluorescence diffuse optical tomography based on compressive sensing.

An Jin, Birsen Yazici, Vasilis Ntziachristos.   

Abstract

Fluorescence diffuse optical tomography (FDOT) is an emerging molecular imaging modality that uses near infrared light to excite the fluorophore injected into tissue; and to reconstruct the fluorophore concentration from boundary measurements. The FDOT image reconstruction is a highly ill-posed inverse problem due to a large number of unknowns and limited number of measurements. However, the fluorophore distribution is often very sparse in the imaging domain since fluorophores are typically designed to accumulate in relatively small regions. In this paper, we use compressive sensing (CS) framework to design light illumination and detection patterns to improve the reconstruction of sparse fluorophore concentration. Unlike the conventional FDOT imaging where spatially distributed light sources illuminate the imaging domain one at a time and the corresponding boundary measurements are used for image reconstruction, we assume that the light sources illuminate the imaging domain simultaneously several times and the corresponding boundary measurements are linearly filtered prior to image reconstruction. We design a set of optical intensities (illumination patterns) and a linear filter (detection pattern) applied to the boundary measurements to improve the reconstruction of sparse fluorophore concentration maps. We show that the FDOT sensing matrix can be expressed as a columnwise Kronecker product of two matrices determined by the excitation and emission light fields. We derive relationships between the incoherence of the FDOT forward matrix and these two matrices, and use these results to reduce the incoherence of the FDOT forward matrix. We present extensive numerical simulation and the results of a real phantom experiment to demonstrate the improvements in image reconstruction due to the CS-based light illumination and detection patterns in conjunction with relaxation and greedy-type reconstruction algorithms.

Entities:  

Year:  2014        PMID: 24815621     DOI: 10.1109/TIP.2014.2300756

Source DB:  PubMed          Journal:  IEEE Trans Image Process        ISSN: 1057-7149            Impact factor:   10.856


  7 in total

1.  Wide-field fluorescence molecular tomography with compressive sensing based preconditioning.

Authors:  Ruoyang Yao; Qi Pian; Xavier Intes
Journal:  Biomed Opt Express       Date:  2015-11-17       Impact factor: 3.732

2.  Sparse Reconstruction of Fluorescence Molecular Tomography Using Variable Splitting and Alternating Direction Scheme.

Authors:  Jinzuo Ye; Yang Du; Yu An; Yamin Mao; Shixin Jiang; Wenting Shang; Kunshan He; Xin Yang; Kun Wang; Chongwei Chi; Jie Tian
Journal:  Mol Imaging Biol       Date:  2018-02       Impact factor: 3.488

3.  Image reconstruction in fluorescence molecular tomography with sparsity-initialized maximum-likelihood expectation maximization.

Authors:  Yansong Zhu; Abhinav K Jha; Dean F Wong; Arman Rahmim
Journal:  Biomed Opt Express       Date:  2018-06-13       Impact factor: 3.732

4.  Improving mesoscopic fluorescence molecular tomography via preconditioning and regularization.

Authors:  Fugang Yang; Ruoyang Yao; Mehmet Ozturk; Denzel Faulkner; Qinglan Qu; Xavier Intes
Journal:  Biomed Opt Express       Date:  2018-05-23       Impact factor: 3.732

5.  Nonlinear greedy sparsity-constrained algorithm for direct reconstruction of fluorescence molecular lifetime tomography.

Authors:  Chuangjian Cai; Lin Zhang; Wenjuan Cai; Dong Zhang; Yanlu Lv; Jianwen Luo
Journal:  Biomed Opt Express       Date:  2016-03-09       Impact factor: 3.732

6.  A Sparsity-Constrained Preconditioned Kaczmarz Reconstruction Method for Fluorescence Molecular Tomography.

Authors:  Duofan Chen; Jimin Liang; Yao Li; Guanghui Qiu
Journal:  Biomed Res Int       Date:  2016-11-24       Impact factor: 3.411

7.  Compressed Sensing With a Gaussian Scale Mixture Model for Limited View Photoacoustic Computed Tomography In Vivo.

Authors:  Jing Meng; Chengbo Liu; Jeesu Kim; Chulhong Kim; Liang Song
Journal:  Technol Cancer Res Treat       Date:  2018-01-01
  7 in total

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